RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 MED23Q9ULK4 1368 aa15.42■□□□□ 0.06
HCFC1-204ENST00000461098 TTLL12Q14166 644 aaPredicted RBP15.42■□□□□ 0.06
HCFC1-204ENST00000461098 SPRYD7Q5W111 196 aa15.42■□□□□ 0.06
HCFC1-204ENST00000461098 RIC3Q7Z5B4 369 aa15.42■□□□□ 0.06
HCFC1-204ENST00000461098 ANKRD18AQ8IVF6 992 aa15.42■□□□□ 0.06
HCFC1-204ENST00000461098 CCDC191Q8NCU4 936 aa15.42■□□□□ 0.06
HCFC1-204ENST00000461098 MYD88Q99836 296 aa15.42■□□□□ 0.06
HCFC1-204ENST00000461098 LAMB1P07942 1786 aa15.41■□□□□ 0.06
HCFC1-204ENST00000461098 TXNRD3Q86VQ6 643 aa15.41■□□□□ 0.06
HCFC1-204ENST00000461098 ZBED3Q96IU2 234 aaPredicted RBP15.41■□□□□ 0.06
HCFC1-204ENST00000461098 MINPP1Q9UNW1 487 aa15.41■□□□□ 0.06
HCFC1-204ENST00000461098 FZD1Q9UP38 647 aa15.41■□□□□ 0.06
HCFC1-204ENST00000461098 RBBP6Q7Z6E9 1792 aaKnown RBP15.4■□□□□ 0.06
HCFC1-204ENST00000461098 SASH1O94885 1247 aa15.4■□□□□ 0.06
HCFC1-204ENST00000461098 HSP90B1P14625 803 aaKnown RBP15.4■□□□□ 0.06
HCFC1-204ENST00000461098 PRKG1Q13976 671 aa15.4■□□□□ 0.06
HCFC1-204ENST00000461098 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
HCFC1-204ENST00000461098 OTOP1Q7RTM1 612 aa15.4■□□□□ 0.06
HCFC1-204ENST00000461098 MBIPQ9NS73 344 aa15.4■□□□□ 0.06
HCFC1-204ENST00000461098 SPEF2Q9C093 1822 aa15.39■□□□□ 0.05
HCFC1-204ENST00000461098 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
HCFC1-204ENST00000461098 NF2P35240 595 aa15.39■□□□□ 0.05
HCFC1-204ENST00000461098 CAP1Q01518 475 aa15.39■□□□□ 0.05
HCFC1-204ENST00000461098 GOLGA2Q08379 1002 aa15.39■□□□□ 0.05
HCFC1-204ENST00000461098 IFNL1Q8IU54 200 aa15.39■□□□□ 0.05
HCFC1-204ENST00000461098 OGFOD1Q8N543 542 aa15.39■□□□□ 0.05
HCFC1-204ENST00000461098 BSDC1Q9NW68 430 aaPredicted RBP15.39■□□□□ 0.05
HCFC1-204ENST00000461098 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
HCFC1-204ENST00000461098 SSC5DA1L4H1 1573 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 IGF2BP3O00425 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
HCFC1-204ENST00000461098 ALDH1A1P00352 501 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 CCT4P50991 539 aaKnown RBP15.38■□□□□ 0.05
HCFC1-204ENST00000461098 MAP3K11Q16584 847 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 ARMC9Q7Z3E5 817 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 TTLL11Q8NHH1 800 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 RUNDC1Q96C34 613 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 METTL22Q9BUU2 404 aaPredicted RBP15.38■□□□□ 0.05
HCFC1-204ENST00000461098 ANGEL1Q9UNK9 670 aaKnown RBP15.38■□□□□ 0.05
HCFC1-204ENST00000461098 TRIM17Q9Y577 477 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 MYO3BQ8WXR4 1341 aa15.38■□□□□ 0.05
HCFC1-204ENST00000461098 MMP14P50281 582 aa15.37■□□□□ 0.05
HCFC1-204ENST00000461098 CTSWP56202 376 aa15.37■□□□□ 0.05
HCFC1-204ENST00000461098 INTS3Q68E01 1043 aaKnown RBP15.37■□□□□ 0.05
HCFC1-204ENST00000461098 COA1Q9GZY4 146 aa15.37■□□□□ 0.05
HCFC1-204ENST00000461098 IGKV5-2P06315 115 aa15.36■□□□□ 0.05
HCFC1-204ENST00000461098 KLRK1P26718 216 aa15.36■□□□□ 0.05
HCFC1-204ENST00000461098 FXR1P51114 621 aaKnown RBP eCLIP15.36■□□□□ 0.05
HCFC1-204ENST00000461098 INHBEP58166 350 aa15.36■□□□□ 0.05
HCFC1-204ENST00000461098 APOBEC3FQ8IUX4 373 aaKnown RBP15.36■□□□□ 0.05
HCFC1-204ENST00000461098 CLMNQ96JQ2 1002 aa15.36■□□□□ 0.05
HCFC1-204ENST00000461098 CDC5LQ99459 802 aaKnown RBP15.36■□□□□ 0.05
HCFC1-204ENST00000461098 GREM2Q9H772 168 aa15.36■□□□□ 0.05
HCFC1-204ENST00000461098 PTPN22Q9Y2R2 807 aa15.36■□□□□ 0.05
HCFC1-204ENST00000461098 KIAA0100Q14667 2235 aaKnown RBP15.36■□□□□ 0.05
HCFC1-204ENST00000461098 MYH3P11055 1940 aa15.35■□□□□ 0.05
HCFC1-204ENST00000461098 MANSC4A6NHS7 340 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-204ENST00000461098 EN2P19622 333 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-204ENST00000461098 RALBP1Q15311 655 aa15.35■□□□□ 0.05
HCFC1-204ENST00000461098 TTLL5Q6EMB2 1281 aa15.35■□□□□ 0.05
HCFC1-204ENST00000461098 KIAA0825Q8IV33 1275 aa15.35■□□□□ 0.05
HCFC1-204ENST00000461098 FBXW7Q969H0 707 aa15.35■□□□□ 0.05
HCFC1-204ENST00000461098 WNK4Q96J92 1243 aa15.35■□□□□ 0.05
HCFC1-204ENST00000461098 DEFB129Q9H1M3 183 aa15.35■□□□□ 0.05
HCFC1-204ENST00000461098 COL1A1P02452 1464 aaPredicted RBP15.34■□□□□ 0.05
HCFC1-204ENST00000461098 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
HCFC1-204ENST00000461098 ZBTB48P10074 688 aaPredicted RBP15.34■□□□□ 0.05
HCFC1-204ENST00000461098 GJA5P36382 358 aa15.34■□□□□ 0.05
HCFC1-204ENST00000461098 ARMC5Q96C12 935 aa15.34■□□□□ 0.05
HCFC1-204ENST00000461098 SLC10A4Q96EP9 437 aa15.34■□□□□ 0.05
HCFC1-204ENST00000461098 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
HCFC1-204ENST00000461098 PCDHAC2Q9Y5I4 1007 aa15.34■□□□□ 0.05
HCFC1-204ENST00000461098 RANBP2P49792 3224 aaKnown RBP15.34■□□□□ 0.05
HCFC1-204ENST00000461098 CERS5Q8N5B7 392 aa15.33■□□□□ 0.04
HCFC1-204ENST00000461098 C8orf58Q8NAV2 365 aa15.33■□□□□ 0.04
HCFC1-204ENST00000461098 CD99L2Q8TCZ2 262 aa15.33■□□□□ 0.04
HCFC1-204ENST00000461098 PTPN18Q99952 460 aa15.33■□□□□ 0.04
HCFC1-204ENST00000461098 MAP3K2Q9Y2U5 619 aa15.33■□□□□ 0.04
HCFC1-204ENST00000461098 LEMD3Q9Y2U8 911 aa15.33■□□□□ 0.04
HCFC1-204ENST00000461098 IRS2Q9Y4H2 1338 aa15.33■□□□□ 0.04
HCFC1-204ENST00000461098 ECM29Q5VYK3 1845 aa15.32■□□□□ 0.04
HCFC1-204ENST00000461098 GTF2IP78347 998 aa15.32■□□□□ 0.04
HCFC1-204ENST00000461098 CRHR2Q13324 411 aa15.32■□□□□ 0.04
HCFC1-204ENST00000461098 MTMR14Q8NCE2 650 aa15.32■□□□□ 0.04
HCFC1-204ENST00000461098 ZNF804BA4D1E1 1349 aa15.32■□□□□ 0.04
HCFC1-204ENST00000461098 AOX1Q06278 1338 aa15.32■□□□□ 0.04
HCFC1-204ENST00000461098 TESPA1A2RU30 521 aaPredicted RBP15.31■□□□□ 0.04
HCFC1-204ENST00000461098 ERO1AQ96HE7 468 aa15.31■□□□□ 0.04
HCFC1-204ENST00000461098 IFT57Q9NWB7 429 aa15.31■□□□□ 0.04
HCFC1-204ENST00000461098 PI4KAP2A4QPH2 592 aa15.3■□□□□ 0.04
HCFC1-204ENST00000461098 UNCXA6NJT0 531 aa15.3■□□□□ 0.04
HCFC1-204ENST00000461098 H7C1W4 665 aa15.3■□□□□ 0.04
HCFC1-204ENST00000461098 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
HCFC1-204ENST00000461098 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
HCFC1-204ENST00000461098 PI4KAP1Q8N8J0 262 aa15.3■□□□□ 0.04
HCFC1-204ENST00000461098 CD209Q9NNX6 404 aa15.3■□□□□ 0.04
HCFC1-204ENST00000461098 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.3■□□□□ 0.04
HCFC1-204ENST00000461098 COLQQ9Y215 455 aaPredicted RBP15.3■□□□□ 0.04
HCFC1-204ENST00000461098 PPP2R3BQ9Y5P8 575 aa15.3■□□□□ 0.04
HCFC1-204ENST00000461098 MYBBP1AQ9BQG0 1328 aaKnown RBP15.29■□□□□ 0.04
HCFC1-204ENST00000461098 SNAP23O00161 211 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms