RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 CEP57L1Q8IYX8 460 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 AOPEPQ8N6M6 819 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 NAT10Q9H0A0 1025 aaKnown RBP18.07■□□□□ 0.48
SSR4-206ENST00000460616 PSDA5PKW4 1024 aaPredicted RBP18.07■□□□□ 0.48
SSR4-206ENST00000460616 KINO60870 393 aaKnown RBP18.07■□□□□ 0.48
SSR4-206ENST00000460616 TUBB4AP04350 444 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
SSR4-206ENST00000460616 CCDC73Q6ZRK6 1079 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 TRIM34Q9BYJ4 488 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 TAF6LQ9Y6J9 622 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
SSR4-206ENST00000460616 WNK3Q9BYP7 1800 aa18.06■□□□□ 0.48
SSR4-206ENST00000460616 ZRANB2O95218 330 aaKnown RBP eCLIP18.06■□□□□ 0.48
SSR4-206ENST00000460616 TPM4P67936 248 aa18.06■□□□□ 0.48
SSR4-206ENST00000460616 MEX3CQ5U5Q3 659 aaKnown RBP18.06■□□□□ 0.48
SSR4-206ENST00000460616 UBXN4Q92575 508 aa18.06■□□□□ 0.48
SSR4-206ENST00000460616 FEZ2Q9UHY8 353 aaPredicted RBP18.06■□□□□ 0.48
SSR4-206ENST00000460616 POLR3GO15318 223 aaPredicted RBP18.06■□□□□ 0.48
SSR4-206ENST00000460616 RAD51AP2Q09MP3 1159 aa18.06■□□□□ 0.48
SSR4-206ENST00000460616 GOLPH3LQ9H4A5 285 aa18.06■□□□□ 0.48
SSR4-206ENST00000460616 RCOR1Q9UKL0 485 aa18.06■□□□□ 0.48
SSR4-206ENST00000460616 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
SSR4-206ENST00000460616 PARP4Q9UKK3 1724 aaKnown RBP18.05■□□□□ 0.48
SSR4-206ENST00000460616 AACSQ86V21 672 aa18.05■□□□□ 0.48
SSR4-206ENST00000460616 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
SSR4-206ENST00000460616 ADD1P35611 737 aaKnown RBP18.04■□□□□ 0.48
SSR4-206ENST00000460616 GORABQ5T7V8 394 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 HOMER1Q86YM7 354 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 TXLNBQ8N3L3 684 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 CCDC150Q8NCX0 1101 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 FBXW7Q969H0 707 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 SNRKQ9NRH2 765 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 PKD1L3Q7Z443 1732 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 SFPQP23246 707 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSR4-206ENST00000460616 ARMCX5Q6P1M9 558 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 IL17REQ8NFR9 667 aa18.04■□□□□ 0.48
SSR4-206ENST00000460616 ORC3Q9UBD5 711 aaPredicted RBP18.04■□□□□ 0.48
SSR4-206ENST00000460616 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 PI4KAP2A4QPH2 592 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 NRDCO43847 1150 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
SSR4-206ENST00000460616 FAM160A1Q05DH4 1040 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 ERC1Q8IUD2 1116 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 PI4KAP1Q8N8J0 262 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 NEK11Q8NG66 645 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 RAPGEF4Q8WZA2 1011 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 HMG20BQ9P0W2 317 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.03■□□□□ 0.48
SSR4-206ENST00000460616 KCNJ6P48051 423 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 TSGA10IPQ3SY00 556 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 TMC6Q7Z403 805 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 ENGASEQ8NFI3 743 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 ERCC4Q92889 916 aaPredicted RBP18.03■□□□□ 0.48
SSR4-206ENST00000460616 BABAM1Q9NWV8 329 aa18.03■□□□□ 0.48
SSR4-206ENST00000460616 SMC2O95347 1197 aa18.02■□□□□ 0.48
SSR4-206ENST00000460616 ETF1P62495 437 aaKnown RBP18.02■□□□□ 0.48
SSR4-206ENST00000460616 FTOQ9C0B1 505 aaKnown RBP eCLIP18.02■□□□□ 0.48
SSR4-206ENST00000460616 XPO4Q9C0E2 1151 aaKnown RBP18.02■□□□□ 0.48
SSR4-206ENST00000460616 DNAI1Q9UI46 699 aa18.02■□□□□ 0.48
SSR4-206ENST00000460616 MTX1Q13505 466 aa18.01■□□□□ 0.47
SSR4-206ENST00000460616 FNBP4Q8N3X1 1017 aaPredicted RBP18.01■□□□□ 0.47
SSR4-206ENST00000460616 MNS1Q8NEH6 495 aa18.01■□□□□ 0.47
SSR4-206ENST00000460616 PA2G4Q9UQ80 394 aaKnown RBP18.01■□□□□ 0.47
SSR4-206ENST00000460616 HSP90B1P14625 803 aaKnown RBP18.01■□□□□ 0.47
SSR4-206ENST00000460616 FSD1Q9BTV5 496 aa18.01■□□□□ 0.47
SSR4-206ENST00000460616 IFNKQ9P0W0 207 aa18.01■□□□□ 0.47
SSR4-206ENST00000460616 CCDC9Q9Y3X0 531 aaKnown RBP18.01■□□□□ 0.47
SSR4-206ENST00000460616 AFF2P51816 1311 aa18.01■□□□□ 0.47
SSR4-206ENST00000460616 ATP8B1O43520 1251 aa18■□□□□ 0.47
SSR4-206ENST00000460616 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
SSR4-206ENST00000460616 DHX8Q14562 1220 aaKnown RBP18■□□□□ 0.47
SSR4-206ENST00000460616 SDF4Q9BRK5 362 aa18■□□□□ 0.47
SSR4-206ENST00000460616 USP21Q9UK80 565 aa18■□□□□ 0.47
SSR4-206ENST00000460616 ME1P48163 572 aa18■□□□□ 0.47
SSR4-206ENST00000460616 KRT32Q14532 448 aa18■□□□□ 0.47
SSR4-206ENST00000460616 MUM1L1Q5H9M0 696 aa18■□□□□ 0.47
SSR4-206ENST00000460616 KRBA2Q6ZNG9 492 aa18■□□□□ 0.47
SSR4-206ENST00000460616 FSIP1Q8NA03 581 aa18■□□□□ 0.47
SSR4-206ENST00000460616 SPATA31A1Q5TZJ5 1347 aa18■□□□□ 0.47
SSR4-206ENST00000460616 OVOS2A0A0G2JMS6 1433 aa18■□□□□ 0.47
SSR4-206ENST00000460616 PHLPP2Q6ZVD8 1323 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 TPM1P09493 284 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 GPS2Q13227 327 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 Q6ZUG5 572 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 NEK1Q96PY6 1258 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 USP28Q96RU2 1077 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 SRRTQ9BXP5 876 aaKnown RBP17.99■□□□□ 0.47
SSR4-206ENST00000460616 CCP110O43303 1012 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 ST5P78524 1137 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 ZRSR1Q15695 479 aaKnown RBP17.99■□□□□ 0.47
SSR4-206ENST00000460616 ZNF530Q6P9A1 599 aaPredicted RBP17.99■□□□□ 0.47
SSR4-206ENST00000460616 SMARCE1Q969G3 411 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 ZCCHC17Q9NP64 241 aaKnown RBP17.99■□□□□ 0.47
SSR4-206ENST00000460616 N4BP2Q86UW6 1770 aaPredicted RBP17.99■□□□□ 0.47
SSR4-206ENST00000460616 DISP2A7MBM2 1401 aa17.99■□□□□ 0.47
SSR4-206ENST00000460616 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
SSR4-206ENST00000460616 SEC31AO94979 1220 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms