RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 WISP1O95388 367 aa6.18□□□□□ -1.42
RFC4-211ENST00000460408 SPINK2P20155 84 aa6.18□□□□□ -1.42
RFC4-211ENST00000460408 NFIAQ12857 509 aa6.18□□□□□ -1.42
RFC4-211ENST00000460408 COX20Q5RI15 118 aa6.18□□□□□ -1.42
RFC4-211ENST00000460408 INTS5Q6P9B9 1019 aaKnown RBP6.18□□□□□ -1.42
RFC4-211ENST00000460408 ADAMTS4O75173 837 aa6.17□□□□□ -1.42
RFC4-211ENST00000460408 CD68P34810 354 aaPredicted RBP6.17□□□□□ -1.42
RFC4-211ENST00000460408 TRIP4Q15650 581 aaPredicted RBP6.17□□□□□ -1.42
RFC4-211ENST00000460408 OR13H1Q8NG92 308 aa6.17□□□□□ -1.42
RFC4-211ENST00000460408 COL26A1Q96A83 441 aa6.17□□□□□ -1.42
RFC4-211ENST00000460408 FAM46AQ96IP4 442 aaKnown RBP6.17□□□□□ -1.42
RFC4-211ENST00000460408 LINC01387J3KSC0 135 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 GRIK1P39086 918 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 SERPINB4P48594 390 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 RNF43Q68DV7 783 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 CAPN12Q6ZSI9 719 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 ETFBKMTQ8IXQ9 262 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 CCER1Q8TC90 406 aaPredicted RBP6.16□□□□□ -1.42
RFC4-211ENST00000460408 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
RFC4-211ENST00000460408 C7orf69Q9H7B7 122 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 KCNK4Q9NYG8 393 aa6.16□□□□□ -1.42
RFC4-211ENST00000460408 PRR19A6NJB7 356 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 CDC27P30260 824 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 COL13A1Q5TAT6 717 aaPredicted RBP6.15□□□□□ -1.42
RFC4-211ENST00000460408 KIAA1211Q6ZU35 1233 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 ACAD11Q709F0 780 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 DTX1Q86Y01 620 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 TRIM42Q8IWZ5 723 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 UTP4Q969X6 686 aaKnown RBP6.15□□□□□ -1.42
RFC4-211ENST00000460408 DBNDD2Q9BQY9 259 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 MKNK1Q9BUB5 465 aa6.15□□□□□ -1.42
RFC4-211ENST00000460408 BRD2P25440 801 aaKnown RBP6.14□□□□□ -1.43
RFC4-211ENST00000460408 ATP11AP98196 1134 aa6.14□□□□□ -1.43
RFC4-211ENST00000460408 HYAL2Q12891 473 aa6.14□□□□□ -1.43
RFC4-211ENST00000460408 KLHL23Q8NBE8 558 aa6.14□□□□□ -1.43
RFC4-211ENST00000460408 MYRFLQ96LU7 910 aa6.14□□□□□ -1.43
RFC4-211ENST00000460408 SEPT3Q9UH03 358 aa6.14□□□□□ -1.43
RFC4-211ENST00000460408 RNF114Q9Y508 228 aa6.14□□□□□ -1.43
RFC4-211ENST00000460408 HMX2A2RU54 273 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 FSCN2O14926 492 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 SMNDC1O75940 238 aaKnown RBP eCLIP6.13□□□□□ -1.43
RFC4-211ENST00000460408 CEP135Q66GS9 1140 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 TXNDC11Q6PKC3 985 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 ADAMTSL4Q6UY14 1074 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 SND1Q7KZF4 910 aaKnown RBP eCLIP6.13□□□□□ -1.43
RFC4-211ENST00000460408 SPACA7Q96KW9 195 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 LACRTQ9GZZ8 138 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 EGFL7Q9UHF1 273 aa6.13□□□□□ -1.43
RFC4-211ENST00000460408 SOWAHDA6NJG2 315 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 UBAP1LF5GYI3 381 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 KIF4AO95239 1232 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 DUOXA2Q1HG44 320 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 FAM26DQ5JW98 314 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 C16orf46Q6P387 395 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 CLEC10AQ8IUN9 316 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 FAM20CQ8IXL6 584 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 PIK3R5Q8WYR1 880 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 FAM83CQ9BQN1 747 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 SAP130Q9H0E3 1048 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 FAM13BQ9NYF5 915 aa6.12□□□□□ -1.43
RFC4-211ENST00000460408 ADAM11O75078 769 aa6.11□□□□□ -1.43
RFC4-211ENST00000460408 WNT11O96014 354 aa6.11□□□□□ -1.43
RFC4-211ENST00000460408 ECM1Q16610 540 aa6.11□□□□□ -1.43
RFC4-211ENST00000460408 FAM117BQ6P1L5 589 aa6.11□□□□□ -1.43
RFC4-211ENST00000460408 GTF3C2Q8WUA4 911 aaPredicted RBP6.11□□□□□ -1.43
RFC4-211ENST00000460408 FOXD4L4Q8WXT5 416 aaPredicted RBP6.11□□□□□ -1.43
RFC4-211ENST00000460408 CARD10Q9BWT7 1032 aa6.11□□□□□ -1.43
RFC4-211ENST00000460408 RASSF4Q9H2L5 321 aa6.11□□□□□ -1.43
RFC4-211ENST00000460408 MTMR7Q9Y216 660 aa6.11□□□□□ -1.43
RFC4-211ENST00000460408 ARID1BQ8NFD5 2236 aaPredicted RBP6.11□□□□□ -1.43
RFC4-211ENST00000460408 TNFRSF10BO14763 440 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 ICMTO60725 284 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 EPHA1P21709 976 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 ZNF211Q13398 564 aaPredicted RBP6.1□□□□□ -1.43
RFC4-211ENST00000460408 NAA30Q147X3 362 aaPredicted RBP6.1□□□□□ -1.43
RFC4-211ENST00000460408 TMCO4Q5TGY1 634 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 TTC39BQ5VTQ0 682 aaPredicted RBP6.1□□□□□ -1.43
RFC4-211ENST00000460408 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.1□□□□□ -1.43
RFC4-211ENST00000460408 UBASH3BQ8TF42 649 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 PBX4Q9BYU1 374 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 ADAM19Q9H013 955 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 ADGRE2Q9UHX3 823 aa6.1□□□□□ -1.43
RFC4-211ENST00000460408 FNDC3AQ9Y2H6 1198 aaKnown RBP6.1□□□□□ -1.43
RFC4-211ENST00000460408 DDX3YO15523 660 aaKnown RBP6.09□□□□□ -1.43
RFC4-211ENST00000460408 NPR3P17342 541 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 CDC25BP30305 580 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 ANKRD34AQ69YU3 496 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 CEP120Q8N960 986 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 SHKBP1Q8TBC3 707 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 HELQQ8TDG4 1101 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 KLHDC7BQ96G42 594 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 SEC31BQ9NQW1 1179 aa6.09□□□□□ -1.43
RFC4-211ENST00000460408 H3BRB1 525 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 ABL1P00519 1130 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 BMP3P12645 472 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 PTPRAP18433 802 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 FZD5Q13467 585 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 MTMR3Q13615 1198 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 LCE1DQ5T752 114 aa6.08□□□□□ -1.44
RFC4-211ENST00000460408 BEND4Q6ZU67 534 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms