RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 TFCP2Q12800 502 aa15.91■□□□□ 0.14
COL18A1-206ENST00000459895 C15orf52Q6ZUT6 534 aaKnown RBP15.91■□□□□ 0.14
COL18A1-206ENST00000459895 ZNF784Q8NCA9 323 aaPredicted RBP15.91■□□□□ 0.14
COL18A1-206ENST00000459895 EXOC6Q8TAG9 804 aa15.91■□□□□ 0.14
COL18A1-206ENST00000459895 ZC3H12CQ9C0D7 883 aaKnown RBP15.91■□□□□ 0.14
COL18A1-206ENST00000459895 ZNRF3Q9ULT6 936 aa15.91■□□□□ 0.14
COL18A1-206ENST00000459895 EXOC6BQ9Y2D4 811 aa15.91■□□□□ 0.14
COL18A1-206ENST00000459895 RAD17O75943 681 aa15.9■□□□□ 0.14
COL18A1-206ENST00000459895 SASH1O94885 1247 aa15.9■□□□□ 0.14
COL18A1-206ENST00000459895 UBE4AQ14139 1066 aa15.9■□□□□ 0.14
COL18A1-206ENST00000459895 ATP2B3Q16720 1220 aa15.9■□□□□ 0.14
COL18A1-206ENST00000459895 RPAP2Q8IXW5 612 aaPredicted RBP15.9■□□□□ 0.14
COL18A1-206ENST00000459895 GLTPD2A6NH11 291 aa15.89■□□□□ 0.13
COL18A1-206ENST00000459895 HMMRO75330 724 aa15.89■□□□□ 0.13
COL18A1-206ENST00000459895 SURF6O75683 361 aaKnown RBP15.89■□□□□ 0.13
COL18A1-206ENST00000459895 DDNO94850 711 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-206ENST00000459895 GYG1P46976 350 aa15.89■□□□□ 0.13
COL18A1-206ENST00000459895 EIF6P56537 245 aaKnown RBP15.89■□□□□ 0.13
COL18A1-206ENST00000459895 OS9Q13438 667 aaPredicted RBP15.89■□□□□ 0.13
COL18A1-206ENST00000459895 ZNF804AQ7Z570 1209 aa15.89■□□□□ 0.13
COL18A1-206ENST00000459895 KCNQ5Q9NR82 932 aa15.89■□□□□ 0.13
COL18A1-206ENST00000459895 NOP58Q9Y2X3 529 aaKnown RBP15.89■□□□□ 0.13
COL18A1-206ENST00000459895 PCDHB15Q9Y5E8 787 aa15.89■□□□□ 0.13
COL18A1-206ENST00000459895 KDM2BQ8NHM5 1336 aa15.89■□□□□ 0.13
COL18A1-206ENST00000459895 SLC5A1P13866 664 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 ADORA1P30542 326 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 CXCL9Q07325 125 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 COA1Q9GZY4 146 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 NMRK2Q9NPI5 230 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 CEP126Q9P2H0 1117 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 GJA3Q9Y6H8 435 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
COL18A1-206ENST00000459895 G3V3G9 751 aa15.87■□□□□ 0.13
COL18A1-206ENST00000459895 PSMD14O00487 310 aa15.87■□□□□ 0.13
COL18A1-206ENST00000459895 G3BP1Q13283 466 aaKnown RBP eCLIP15.87■□□□□ 0.13
COL18A1-206ENST00000459895 DCAF8Q5TAQ9 597 aa15.87■□□□□ 0.13
COL18A1-206ENST00000459895 CIAPIN1Q6FI81 312 aa15.87■□□□□ 0.13
COL18A1-206ENST00000459895 GPC2Q8N158 579 aa15.87■□□□□ 0.13
COL18A1-206ENST00000459895 LPIN2Q92539 896 aa15.87■□□□□ 0.13
COL18A1-206ENST00000459895 DOCK2Q92608 1830 aa15.87■□□□□ 0.13
COL18A1-206ENST00000459895 A0A1B0GUL7 405 aa15.86■□□□□ 0.13
COL18A1-206ENST00000459895 IFIT1P09914 478 aaKnown RBP15.86■□□□□ 0.13
COL18A1-206ENST00000459895 SCNN1DP51172 638 aa15.86■□□□□ 0.13
COL18A1-206ENST00000459895 L3MBTL3Q96JM7 780 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-206ENST00000459895 GPBP1L1Q9HC44 474 aaPredicted RBP15.86■□□□□ 0.13
COL18A1-206ENST00000459895 CD209Q9NNX6 404 aa15.86■□□□□ 0.13
COL18A1-206ENST00000459895 AKAP11Q9UKA4 1901 aa15.86■□□□□ 0.13
COL18A1-206ENST00000459895 IL1R1P14778 569 aa15.85■□□□□ 0.13
COL18A1-206ENST00000459895 GMPSP49915 693 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-206ENST00000459895 TNNI3KQ59H18 835 aa15.85■□□□□ 0.13
COL18A1-206ENST00000459895 PODNQ7Z5L7 613 aa15.85■□□□□ 0.13
COL18A1-206ENST00000459895 FBXW7Q969H0 707 aa15.85■□□□□ 0.13
COL18A1-206ENST00000459895 FAM84BQ96KN1 310 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-206ENST00000459895 TLR7Q9NYK1 1049 aaKnown RBP15.85■□□□□ 0.13
COL18A1-206ENST00000459895 IQSEC3Q9UPP2 1182 aaPredicted RBP15.85■□□□□ 0.13
COL18A1-206ENST00000459895 JAG2Q9Y219 1238 aa15.85■□□□□ 0.13
COL18A1-206ENST00000459895 FPGT-TNNI3KV9GXZ4 949 aa15.85■□□□□ 0.13
COL18A1-206ENST00000459895 APBB1O00213 710 aa15.84■□□□□ 0.13
COL18A1-206ENST00000459895 BCAMP50895 628 aa15.84■□□□□ 0.13
COL18A1-206ENST00000459895 DPY19L2Q6NUT2 758 aa15.84■□□□□ 0.13
COL18A1-206ENST00000459895 MXD3Q9BW11 206 aa15.84■□□□□ 0.13
COL18A1-206ENST00000459895 ZBTB12Q9Y330 459 aaPredicted RBP15.84■□□□□ 0.13
COL18A1-206ENST00000459895 MYO5AQ9Y4I1 1855 aaKnown RBP15.83■□□□□ 0.12
COL18A1-206ENST00000459895 SHTN1A0MZ66 631 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 USP17L3A6NCW0 530 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 USP17L4A6NCW7 530 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 POTECB2RU33 542 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.12
COL18A1-206ENST00000459895 HIBADHP31937 336 aaKnown RBP15.83■□□□□ 0.12
COL18A1-206ENST00000459895 PHKA1P46020 1223 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 TNIP1Q15025 636 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 DACT2Q5SW24 774 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 USP17L1Q7RTZ2 530 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 FBXO33Q7Z6M2 555 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 ERC1Q8IUD2 1116 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 IL1RAPL2Q9NP60 686 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 AKAP2Q9Y2D5 859 aa15.83■□□□□ 0.12
COL18A1-206ENST00000459895 TIMM10P62072 90 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 GTF2IP78347 998 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 HSP90AB4PQ58FF6 505 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 CAVIN4Q5BKX8 364 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 RSBN1LQ6PCB5 846 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-206ENST00000459895 VPS37DQ86XT2 251 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 TDRD7Q8NHU6 1098 aaKnown RBP15.82■□□□□ 0.12
COL18A1-206ENST00000459895 RHPN1Q8TCX5 695 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 XAGE2Q96GT9 111 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 GPR108Q9NPR9 543 aa15.82■□□□□ 0.12
COL18A1-206ENST00000459895 KIF3CO14782 793 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 AAMPQ13685 434 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 STRIP1Q5VSL9 837 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 CCDC102BQ68D86 513 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 CERS5Q8N5B7 392 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 KIF1BPQ96EK5 621 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 DBNDD2Q9BQY9 259 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 RRAGCQ9HB90 399 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 GPRC5DQ9NZD1 345 aa15.81■□□□□ 0.12
COL18A1-206ENST00000459895 DBNLQ9UJU6 430 aaKnown RBP15.81■□□□□ 0.12
COL18A1-206ENST00000459895 FAM205AQ6ZU69 1335 aa15.8■□□□□ 0.12
COL18A1-206ENST00000459895 VIL1P09327 827 aaKnown RBP15.8■□□□□ 0.12
COL18A1-206ENST00000459895 CHAF1AQ13111 956 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms