RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 IGF2-ASQ6U949 168 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 CMTR1Q8N1G2 835 aaKnown RBP5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 PLD4Q96BZ4 506 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 SAP130Q9H0E3 1048 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 SLC52A1Q9NWF4 448 aa5.46□□□□□ -1.54
HMGB3P30-201ENST00000457863 LOC102724428A0A0B4J2F2 783 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 A0A0U1RQG5 324 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 PTCD1O75127 700 aaKnown RBP5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 SIK1P57059 783 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 SF3A1Q15459 793 aaKnown RBP5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 ARTNQ5T4W7 220 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 NLRP13Q86W25 1043 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 MAP4K3Q8IVH8 894 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 MICAL1Q8TDZ2 1067 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 DCAF11Q8TEB1 546 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 WFDC12Q8WWY7 111 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 CLP1Q92989 425 aaKnown RBP5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 TP53INP1Q96A56 240 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 CCDC136Q96JN2 1154 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 FAM13BQ9NYF5 915 aa5.45□□□□□ -1.54
HMGB3P30-201ENST00000457863 SCO2A0A1W2PP80 73 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 TMEM88BA6NKF7 163 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 GHRHP01286 108 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 NOS3P29474 1203 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 LRP8Q14114 963 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 NAALADL2Q58DX5 795 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 FAM26DQ5JW98 314 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 GORABQ5T7V8 394 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 TMEM164Q5U3C3 297 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 HFE2Q6ZVN8 426 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 CACTIN-AS1Q8N1I8 211 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 NSUN5Q96P11 429 aaKnown RBP5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 KRTAP4-8Q9BYQ9 185 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 RBSNQ9H1K0 784 aa5.44□□□□□ -1.54
HMGB3P30-201ENST00000457863 RAB11FIP3O75154 756 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 VAMP1P23763 118 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 IREB2P48200 963 aaKnown RBP5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 NOM1Q5C9Z4 860 aaKnown RBP5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 Q6ZS46 218 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 DPH6Q7L8W6 267 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 OR13H1Q8NG92 308 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 MEGF10Q96KG7 1140 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 PLCD4Q9BRC7 762 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 BCL2L13Q9BXK5 485 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 ZFP64Q9NPA5 681 aa5.43□□□□□ -1.54
HMGB3P30-201ENST00000457863 J3QW42 95 aa5.42□□□□□ -1.54
HMGB3P30-201ENST00000457863 NOP9Q86U38 636 aaKnown RBP5.42□□□□□ -1.54
HMGB3P30-201ENST00000457863 TMEM130Q8N3G9 435 aa5.42□□□□□ -1.54
HMGB3P30-201ENST00000457863 ABTB2Q8N961 1025 aa5.42□□□□□ -1.54
HMGB3P30-201ENST00000457863 PIK3R5Q8WYR1 880 aa5.42□□□□□ -1.54
HMGB3P30-201ENST00000457863 MRPL18Q9H0U6 180 aaKnown RBP5.42□□□□□ -1.54
HMGB3P30-201ENST00000457863 MUC3BQ9H195 1237 aa5.42□□□□□ -1.54
HMGB3P30-201ENST00000457863 UBAP1LF5GYI3 381 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 KIF4AO95239 1232 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 CENPBP07199 599 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 ZAP70P43403 619 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 ANAPC15P60006 121 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 SETDB1Q15047 1291 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 CCDC181Q5TID7 509 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 CAPN12Q6ZSI9 719 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 DZIP1LQ8IYY4 767 aaKnown RBP5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 MKNK1Q9BUB5 465 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 AKTIPQ9H8T0 292 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 STIM2Q9P246 746 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 FNDC3AQ9Y2H6 1198 aaKnown RBP5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 SBNO2Q9Y2G9 1366 aa5.41□□□□□ -1.54
HMGB3P30-201ENST00000457863 F8W735 103 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 HYAL2Q12891 473 aa5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 GDF6Q6KF10 455 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 PRR23CQ6ZRP0 262 aa5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 IL22RA1Q8N6P7 574 aa5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 GIPC2Q8TF65 315 aa5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 METTL14Q9HCE5 456 aaKnown RBP5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 TRIM33Q9UPN9 1127 aa5.4□□□□□ -1.54
HMGB3P30-201ENST00000457863 PDE12Q6L8Q7 609 aaKnown RBP5.39□□□□□ -1.55
HMGB3P30-201ENST00000457863 SLC51AQ86UW1 340 aa5.39□□□□□ -1.55
HMGB3P30-201ENST00000457863 CCER1Q8TC90 406 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P30-201ENST00000457863 NAP1L5Q96NT1 182 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P30-201ENST00000457863 ABI2Q9NYB9 513 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P30-201ENST00000457863 SLAIN2Q9P270 581 aa5.39□□□□□ -1.55
HMGB3P30-201ENST00000457863 RNF112Q9ULX5 631 aa5.39□□□□□ -1.55
HMGB3P30-201ENST00000457863 SMNDC1O75940 238 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P30-201ENST00000457863 ATP2B4P23634 1241 aa5.38□□□□□ -1.55
HMGB3P30-201ENST00000457863 NAA30Q147X3 362 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P30-201ENST00000457863 COL13A1Q5TAT6 717 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P30-201ENST00000457863 B4GALNT3Q6L9W6 998 aa5.38□□□□□ -1.55
HMGB3P30-201ENST00000457863 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.38□□□□□ -1.55
HMGB3P30-201ENST00000457863 PSMG3-AS1Q96PY0 264 aa5.38□□□□□ -1.55
HMGB3P30-201ENST00000457863 TLDC2A0PJX2 215 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 TM4SF5O14894 197 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 ZBTB39O15060 712 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 ATP11AP98196 1134 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 SPTY2D1Q68D10 685 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 HELQQ8TDG4 1101 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 GPR152Q8TDT2 470 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 MORC4Q8TE76 937 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 SPACA7Q96KW9 195 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 PRDM10Q9NQV6 1147 aa5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 MAGEC2Q9UBF1 373 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P30-201ENST00000457863 HYAL3O43820 417 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms