RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 SRGAP3O43295 1099 aa12.89□□□□□ -0.35
TOP3B-212ENST00000456075 HSPA6P17066 643 aa12.89□□□□□ -0.35
TOP3B-212ENST00000456075 UBE4AQ14139 1066 aa12.89□□□□□ -0.35
TOP3B-212ENST00000456075 USP50Q70EL3 339 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-212ENST00000456075 VPS37DQ86XT2 251 aa12.89□□□□□ -0.35
TOP3B-212ENST00000456075 SIL1Q9H173 461 aa12.89□□□□□ -0.35
TOP3B-212ENST00000456075 KCNQ5Q9NR82 932 aa12.89□□□□□ -0.35
TOP3B-212ENST00000456075 CNOT7Q9UIV1 285 aaKnown RBP12.89□□□□□ -0.35
TOP3B-212ENST00000456075 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-212ENST00000456075 SNAP23O00161 211 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 EYA2O00167 538 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 KLRK1P26718 216 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 RSBN1LQ6PCB5 846 aaPredicted RBP12.88□□□□□ -0.35
TOP3B-212ENST00000456075 TXNRD3Q86VQ6 643 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 DPF2Q92785 391 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
TOP3B-212ENST00000456075 PDE8BO95263 885 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 VIL1P09327 827 aaKnown RBP12.87□□□□□ -0.35
TOP3B-212ENST00000456075 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 POTEJP0CG39 1038 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 APLP1P51693 650 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 PTPN12Q05209 780 aaKnown RBP12.87□□□□□ -0.35
TOP3B-212ENST00000456075 CAVIN4Q5BKX8 364 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
TOP3B-212ENST00000456075 AGBL3Q8NEM8 1001 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 PANK1Q8TE04 598 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 CD209Q9NNX6 404 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 MYO3BQ8WXR4 1341 aa12.87□□□□□ -0.35
TOP3B-212ENST00000456075 FRAT2O75474 233 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 CIAO1O76071 339 aa12.86□□□□□ -0.35
TOP3B-212ENST00000456075 IFIT1P09914 478 aaKnown RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 RLBP1P12271 317 aa12.86□□□□□ -0.35
TOP3B-212ENST00000456075 HIBADHP31937 336 aaKnown RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 IL15P40933 162 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 RFX5P48382 616 aaPredicted RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 GTF2IP78347 998 aa12.86□□□□□ -0.35
TOP3B-212ENST00000456075 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
TOP3B-212ENST00000456075 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
TOP3B-212ENST00000456075 CHMP4BQ9H444 224 aaKnown RBP12.86□□□□□ -0.35
TOP3B-212ENST00000456075 CEP126Q9P2H0 1117 aa12.86□□□□□ -0.35
TOP3B-212ENST00000456075 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
TOP3B-212ENST00000456075 USP17L8P0C7I0 530 aa12.85□□□□□ -0.35
TOP3B-212ENST00000456075 SLC5A1P13866 664 aa12.85□□□□□ -0.35
TOP3B-212ENST00000456075 MTX1Q13505 466 aa12.85□□□□□ -0.35
TOP3B-212ENST00000456075 MAP1SQ66K74 1059 aaPredicted RBP12.85□□□□□ -0.35
TOP3B-212ENST00000456075 PA2G4Q9UQ80 394 aaKnown RBP12.85□□□□□ -0.35
TOP3B-212ENST00000456075 GYG1P46976 350 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 OS9Q13438 667 aaPredicted RBP12.84□□□□□ -0.35
TOP3B-212ENST00000456075 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
TOP3B-212ENST00000456075 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 SAMD7Q7Z3H4 446 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 LPIN2Q92539 896 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 C1orf115Q9H7X2 142 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 COPRSQ9NQ92 184 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 HDAC9Q9UKV0 1011 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
TOP3B-212ENST00000456075 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
TOP3B-212ENST00000456075 IL1R1P14778 569 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 G3BP1Q13283 466 aaKnown RBP eCLIP12.83□□□□□ -0.36
TOP3B-212ENST00000456075 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
TOP3B-212ENST00000456075 ATP2B3Q16720 1220 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 KIF4BQ2VIQ3 1234 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 ATG9AQ7Z3C6 839 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 VGLL2Q8N8G2 317 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 TRPM4Q8TD43 1214 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
TOP3B-212ENST00000456075 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
TOP3B-212ENST00000456075 A0A1B0GUL6 1792 aa12.82□□□□□ -0.36
TOP3B-212ENST00000456075 SCN9AQ15858 1988 aa12.82□□□□□ -0.36
TOP3B-212ENST00000456075 KIAA0825Q8IV33 1275 aa12.82□□□□□ -0.36
TOP3B-212ENST00000456075 DCPSQ96C86 337 aaKnown RBP12.82□□□□□ -0.36
TOP3B-212ENST00000456075 FAM84BQ96KN1 310 aaPredicted RBP12.82□□□□□ -0.36
TOP3B-212ENST00000456075 MXD3Q9BW11 206 aa12.82□□□□□ -0.36
TOP3B-212ENST00000456075 AKAP2Q9Y2D5 859 aa12.82□□□□□ -0.36
TOP3B-212ENST00000456075 IRS2Q9Y4H2 1338 aa12.82□□□□□ -0.36
TOP3B-212ENST00000456075 ZNF609O15014 1411 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 SASH1O94885 1247 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 MMP14P50281 582 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 ZNF280AP59817 542 aaPredicted RBP12.81□□□□□ -0.36
TOP3B-212ENST00000456075 CHAF1AQ13111 956 aaPredicted RBP12.81□□□□□ -0.36
TOP3B-212ENST00000456075 PDE3AQ14432 1141 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 GMLQ99445 158 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 MYOZ2Q9NPC6 264 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 GNL3LQ9NVN8 582 aaKnown RBP12.81□□□□□ -0.36
TOP3B-212ENST00000456075 JAG2Q9Y219 1238 aa12.81□□□□□ -0.36
TOP3B-212ENST00000456075 F8W031 263 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-212ENST00000456075 SURF6O75683 361 aaKnown RBP12.8□□□□□ -0.36
TOP3B-212ENST00000456075 FGFR2P21802 821 aa12.8□□□□□ -0.36
TOP3B-212ENST00000456075 BCAMP50895 628 aa12.8□□□□□ -0.36
TOP3B-212ENST00000456075 HIRAP54198 1017 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-212ENST00000456075 ATP8B2P98198 1209 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms