RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 TAF1P21675 1872 aa19.53■□□□□ 0.72
TMEM220-202ENST00000455996 MED23Q9ULK4 1368 aa19.53■□□□□ 0.72
TMEM220-202ENST00000455996 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
TMEM220-202ENST00000455996 FAM227BQ96M60 508 aa19.52■□□□□ 0.72
TMEM220-202ENST00000455996 ANO2Q9NQ90 1003 aa19.52■□□□□ 0.72
TMEM220-202ENST00000455996 ZNF804BA4D1E1 1349 aa19.52■□□□□ 0.72
TMEM220-202ENST00000455996 SNAP23O00161 211 aa19.51■□□□□ 0.71
TMEM220-202ENST00000455996 AKAP11Q9UKA4 1901 aa19.51■□□□□ 0.71
TMEM220-202ENST00000455996 A0A0D9SFI3 127 aa19.51■□□□□ 0.71
TMEM220-202ENST00000455996 BBOX1O75936 387 aa19.51■□□□□ 0.71
TMEM220-202ENST00000455996 ZAP70P43403 619 aa19.51■□□□□ 0.71
TMEM220-202ENST00000455996 LRRFIP1Q32MZ4 808 aaKnown RBP19.51■□□□□ 0.71
TMEM220-202ENST00000455996 ANKRD31Q8N7Z5 1873 aa19.5■□□□□ 0.71
TMEM220-202ENST00000455996 ANAPC15P60006 121 aa19.5■□□□□ 0.71
TMEM220-202ENST00000455996 FKBP4Q02790 459 aaKnown RBP eCLIP19.5■□□□□ 0.71
TMEM220-202ENST00000455996 TMC4Q7Z404 712 aa19.5■□□□□ 0.71
TMEM220-202ENST00000455996 ANTXR1Q9H6X2 564 aa19.5■□□□□ 0.71
TMEM220-202ENST00000455996 IRS2Q9Y4H2 1338 aa19.49■□□□□ 0.71
TMEM220-202ENST00000455996 RNF113AO15541 343 aaKnown RBP19.49■□□□□ 0.71
TMEM220-202ENST00000455996 ZFYP08048 801 aaPredicted RBP19.49■□□□□ 0.71
TMEM220-202ENST00000455996 TTF1Q15361 905 aaPredicted RBP19.49■□□□□ 0.71
TMEM220-202ENST00000455996 ZMYM1Q5SVZ6 1142 aa19.49■□□□□ 0.71
TMEM220-202ENST00000455996 KIAA1211Q6ZU35 1233 aa19.49■□□□□ 0.71
TMEM220-202ENST00000455996 ILDR2Q71H61 639 aa19.49■□□□□ 0.71
TMEM220-202ENST00000455996 HELLSQ9NRZ9 838 aa19.49■□□□□ 0.71
TMEM220-202ENST00000455996 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
TMEM220-202ENST00000455996 CYP2E1P05181 493 aaPredicted RBP19.48■□□□□ 0.71
TMEM220-202ENST00000455996 SRGNP10124 158 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 MCCP23508 829 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 HSPA4P34932 840 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 PDE6BP35913 854 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 BCAMP50895 628 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 MSL1Q68DK7 614 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 FBXO33Q7Z6M2 555 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 SNX21Q969T3 373 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 LEMD3Q9Y2U8 911 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 CCDC171Q6TFL3 1326 aa19.48■□□□□ 0.71
TMEM220-202ENST00000455996 NPR1P16066 1061 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 RASGRF1Q13972 1273 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 RABEP1Q15276 862 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 MCMDC2Q4G0Z9 681 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 PI16Q6UXB8 463 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 C15orf52Q6ZUT6 534 aaKnown RBP19.47■□□□□ 0.71
TMEM220-202ENST00000455996 SPATA5Q8NB90 893 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 SLC16A10Q8TF71 515 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 KCNB2Q92953 911 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 FAM84BQ96KN1 310 aaPredicted RBP19.47■□□□□ 0.71
TMEM220-202ENST00000455996 XDHP47989 1333 aa19.47■□□□□ 0.71
TMEM220-202ENST00000455996 WTIPA6NIX2 430 aaPredicted RBP19.46■□□□□ 0.71
TMEM220-202ENST00000455996 BECN1Q14457 450 aa19.46■□□□□ 0.71
TMEM220-202ENST00000455996 MAP4K1Q92918 833 aa19.46■□□□□ 0.71
TMEM220-202ENST00000455996 GNL3LQ9NVN8 582 aaKnown RBP19.46■□□□□ 0.71
TMEM220-202ENST00000455996 PDS5AQ29RF7 1337 aaKnown RBP19.46■□□□□ 0.71
TMEM220-202ENST00000455996 SEMA3EO15041 775 aa19.45■□□□□ 0.7
TMEM220-202ENST00000455996 PTH1RQ03431 593 aa19.45■□□□□ 0.7
TMEM220-202ENST00000455996 CAVIN4Q5BKX8 364 aa19.45■□□□□ 0.7
TMEM220-202ENST00000455996 ZNF589Q86UQ0 364 aaPredicted RBP19.45■□□□□ 0.7
TMEM220-202ENST00000455996 IL27Q8NEV9 243 aa19.45■□□□□ 0.7
TMEM220-202ENST00000455996 PIH1D3Q9NQM4 214 aaKnown RBP19.45■□□□□ 0.7
TMEM220-202ENST00000455996 PODXL2Q9NZ53 605 aa19.45■□□□□ 0.7
TMEM220-202ENST00000455996 LRRC37AA6NMS7 1700 aa19.45■□□□□ 0.7
TMEM220-202ENST00000455996 KCNJ4P48050 445 aa19.44■□□□□ 0.7
TMEM220-202ENST00000455996 ZSCAN25Q6NSZ9 544 aa19.44■□□□□ 0.7
TMEM220-202ENST00000455996 TBC1D2Q9BYX2 928 aa19.44■□□□□ 0.7
TMEM220-202ENST00000455996 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.44■□□□□ 0.7
TMEM220-202ENST00000455996 CHGBP05060 677 aa19.43■□□□□ 0.7
TMEM220-202ENST00000455996 GYG1P46976 350 aa19.43■□□□□ 0.7
TMEM220-202ENST00000455996 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
TMEM220-202ENST00000455996 MASTLQ96GX5 879 aa19.43■□□□□ 0.7
TMEM220-202ENST00000455996 ATP2B4P23634 1241 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 ALDH1B1P30837 517 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 GPSM2P81274 684 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 NECTIN1Q15223 517 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 UBE3CQ15386 1083 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 APPBP2Q92624 585 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 PALD1Q9ULE6 856 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 ATP6V0A2Q9Y487 856 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 COL11A2P13942 1736 aaPredicted RBP19.42■□□□□ 0.7
TMEM220-202ENST00000455996 KLRK1P26718 216 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 ADD2P35612 726 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 STYK1Q6J9G0 422 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 SEC62Q99442 399 aaKnown RBP19.42■□□□□ 0.7
TMEM220-202ENST00000455996 ANKIB1Q9P2G1 1089 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 DENND2AQ9ULE3 1009 aa19.42■□□□□ 0.7
TMEM220-202ENST00000455996 PPEF1O14829 653 aaPredicted RBP19.41■□□□□ 0.7
TMEM220-202ENST00000455996 HIBADHP31937 336 aaKnown RBP19.41■□□□□ 0.7
TMEM220-202ENST00000455996 OSBP2Q969R2 916 aa19.41■□□□□ 0.7
TMEM220-202ENST00000455996 PDGFDQ9GZP0 370 aaPredicted RBP19.41■□□□□ 0.7
TMEM220-202ENST00000455996 RBM8AQ9Y5S9 174 aaKnown RBP19.41■□□□□ 0.7
TMEM220-202ENST00000455996 MAST3O60307 1309 aa19.41■□□□□ 0.7
TMEM220-202ENST00000455996 COL1A1P02452 1464 aaPredicted RBP19.41■□□□□ 0.7
TMEM220-202ENST00000455996 LTBP1Q14766 1721 aa19.4■□□□□ 0.7
TMEM220-202ENST00000455996 DOCK2Q92608 1830 aa19.4■□□□□ 0.7
TMEM220-202ENST00000455996 TCRBV5S4A2TA0A5A2 114 aa19.4■□□□□ 0.7
TMEM220-202ENST00000455996 SLC51AQ86UW1 340 aa19.4■□□□□ 0.7
TMEM220-202ENST00000455996 DSCC1Q9BVC3 393 aa19.4■□□□□ 0.7
TMEM220-202ENST00000455996 SNX14Q9Y5W7 946 aa19.4■□□□□ 0.7
TMEM220-202ENST00000455996 C10orf71Q711Q0 1435 aa19.39■□□□□ 0.69
TMEM220-202ENST00000455996 PDE6AP16499 860 aa19.39■□□□□ 0.69
TMEM220-202ENST00000455996 MAP3K12Q12852 859 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms