RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 MAP1SQ66K74 1059 aaPredicted RBP22.17■■□□□ 1.14
COPS7A-202ENST00000455113 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.17■■□□□ 1.14
COPS7A-202ENST00000455113 AGBL3Q8NEM8 1001 aa22.16■■□□□ 1.14
COPS7A-202ENST00000455113 CLUAP1Q96AJ1 413 aa22.16■■□□□ 1.14
COPS7A-202ENST00000455113 SCN9AQ15858 1988 aa22.15■■□□□ 1.14
COPS7A-202ENST00000455113 RSBN1LQ6PCB5 846 aaPredicted RBP22.15■■□□□ 1.14
COPS7A-202ENST00000455113 ZNF804AQ7Z570 1209 aa22.15■■□□□ 1.14
COPS7A-202ENST00000455113 ADAMTSL1Q8N6G6 1762 aa22.15■■□□□ 1.14
COPS7A-202ENST00000455113 TXNRD3Q86VQ6 643 aa22.14■■□□□ 1.14
COPS7A-202ENST00000455113 FTSJ3Q8IY81 847 aaKnown RBP22.14■■□□□ 1.14
COPS7A-202ENST00000455113 METTL24Q5JXM2 366 aa22.14■■□□□ 1.13
COPS7A-202ENST00000455113 ZC3H15Q8WU90 426 aaKnown RBP22.14■■□□□ 1.13
COPS7A-202ENST00000455113 PUS3Q9BZE2 481 aaKnown RBP22.14■■□□□ 1.13
COPS7A-202ENST00000455113 PSME4Q14997 1843 aa22.13■■□□□ 1.13
COPS7A-202ENST00000455113 UBE4AQ14139 1066 aa22.13■■□□□ 1.13
COPS7A-202ENST00000455113 C15orf52Q6ZUT6 534 aaKnown RBP22.13■■□□□ 1.13
COPS7A-202ENST00000455113 MEIS3Q99687 375 aa22.13■■□□□ 1.13
COPS7A-202ENST00000455113 LRRFIP2Q9Y608 721 aaKnown RBP22.13■■□□□ 1.13
COPS7A-202ENST00000455113 MYO3BQ8WXR4 1341 aa22.13■■□□□ 1.13
COPS7A-202ENST00000455113 A0A1B0GUL6 1792 aa22.12■■□□□ 1.13
COPS7A-202ENST00000455113 ITGBL1O95965 494 aaPredicted RBP22.12■■□□□ 1.13
COPS7A-202ENST00000455113 KLRK1P26718 216 aa22.12■■□□□ 1.13
COPS7A-202ENST00000455113 STRIP1Q5VSL9 837 aa22.12■■□□□ 1.13
COPS7A-202ENST00000455113 TTLL5Q6EMB2 1281 aa22.12■■□□□ 1.13
COPS7A-202ENST00000455113 RIPOR2Q9Y4F9 1068 aa22.12■■□□□ 1.13
COPS7A-202ENST00000455113 SNAP23O00161 211 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 HTRA3P83110 453 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 RBM26Q5T8P6 1007 aaKnown RBP22.11■■□□□ 1.13
COPS7A-202ENST00000455113 SAMD7Q7Z3H4 446 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 OGFOD1Q8N543 542 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 CD209Q9NNX6 404 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 CREBZFQ9NS37 354 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 PASKQ96RG2 1323 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 TBC1D10BQ4KMP7 808 aaPredicted RBP22.11■■□□□ 1.13
COPS7A-202ENST00000455113 KLHDC4Q8TBB5 520 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 TRPM4Q8TD43 1214 aa22.11■■□□□ 1.13
COPS7A-202ENST00000455113 SHTN1A0MZ66 631 aa22.1■■□□□ 1.13
COPS7A-202ENST00000455113 USP17L8P0C7I0 530 aa22.1■■□□□ 1.13
COPS7A-202ENST00000455113 LRRC24Q50LG9 513 aa22.1■■□□□ 1.13
COPS7A-202ENST00000455113 TMEM88BA6NKF7 163 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 GTF2IP78347 998 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 IRX6P78412 446 aaPredicted RBP22.09■■□□□ 1.13
COPS7A-202ENST00000455113 KIF4BQ2VIQ3 1234 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 VPS37DQ86XT2 251 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 ZNF609O15014 1411 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 PDE8BO95263 885 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 HIRAP54198 1017 aaPredicted RBP22.09■■□□□ 1.13
COPS7A-202ENST00000455113 DZIP1LQ8IYY4 767 aaKnown RBP22.09■■□□□ 1.13
COPS7A-202ENST00000455113 FBXO3Q9UK99 471 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 TNNQ9UQP3 1299 aa22.09■■□□□ 1.13
COPS7A-202ENST00000455113 EYA2O00167 538 aa22.08■■□□□ 1.12
COPS7A-202ENST00000455113 NEFLP07196 543 aa22.08■■□□□ 1.12
COPS7A-202ENST00000455113 CAVIN4Q5BKX8 364 aa22.08■■□□□ 1.12
COPS7A-202ENST00000455113 DACT2Q5SW24 774 aa22.08■■□□□ 1.12
COPS7A-202ENST00000455113 C20orf194Q5TEA3 1177 aa22.08■■□□□ 1.12
COPS7A-202ENST00000455113 CDC37L1Q7L3B6 337 aa22.08■■□□□ 1.12
COPS7A-202ENST00000455113 TMEM57Q8N5G2 664 aa22.08■■□□□ 1.12
COPS7A-202ENST00000455113 DCPSQ96C86 337 aaKnown RBP22.08■■□□□ 1.12
COPS7A-202ENST00000455113 GNAI2P04899 355 aa22.07■■□□□ 1.12
COPS7A-202ENST00000455113 MMP14P50281 582 aa22.07■■□□□ 1.12
COPS7A-202ENST00000455113 PTPN12Q05209 780 aaKnown RBP22.07■■□□□ 1.12
COPS7A-202ENST00000455113 PGAP2Q9UHJ9 254 aa22.07■■□□□ 1.12
COPS7A-202ENST00000455113 HDAC9Q9UKV0 1011 aa22.07■■□□□ 1.12
COPS7A-202ENST00000455113 CEP350Q5VT06 3117 aa22.07■■□□□ 1.12
COPS7A-202ENST00000455113 IL1R1P14778 569 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 HIBADHP31937 336 aaKnown RBP22.06■■□□□ 1.12
COPS7A-202ENST00000455113 RFX5P48382 616 aaPredicted RBP22.06■■□□□ 1.12
COPS7A-202ENST00000455113 KLRG1Q96E93 195 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 IFIT1P09914 478 aaKnown RBP22.06■■□□□ 1.12
COPS7A-202ENST00000455113 MS4A1P11836 297 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 ZNF280AP59817 542 aaPredicted RBP22.06■■□□□ 1.12
COPS7A-202ENST00000455113 PDE3AQ14432 1141 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 ITPRIPQ8IWB1 547 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 DNAJC5GQ8N7S2 189 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 GMLQ99445 158 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 SIL1Q9H173 461 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 MYOZ2Q9NPC6 264 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 IRS2Q9Y4H2 1338 aa22.06■■□□□ 1.12
COPS7A-202ENST00000455113 SRGAP3O43295 1099 aa22.05■■□□□ 1.12
COPS7A-202ENST00000455113 FRAT2O75474 233 aaPredicted RBP22.05■■□□□ 1.12
COPS7A-202ENST00000455113 PUM3Q15397 648 aaKnown RBP22.05■■□□□ 1.12
COPS7A-202ENST00000455113 PANK1Q8TE04 598 aa22.05■■□□□ 1.12
COPS7A-202ENST00000455113 CIAO1O76071 339 aa22.04■■□□□ 1.12
COPS7A-202ENST00000455113 RLBP1P12271 317 aa22.04■■□□□ 1.12
COPS7A-202ENST00000455113 GYG1P46976 350 aa22.04■■□□□ 1.12
COPS7A-202ENST00000455113 SASH1O94885 1247 aa22.03■■□□□ 1.12
COPS7A-202ENST00000455113 EGFRP00533 1210 aa22.03■■□□□ 1.12
COPS7A-202ENST00000455113 MXD3Q9BW11 206 aa22.03■■□□□ 1.12
COPS7A-202ENST00000455113 GLIS2Q9BZE0 524 aaPredicted RBP22.03■■□□□ 1.12
COPS7A-202ENST00000455113 CEP126Q9P2H0 1117 aa22.03■■□□□ 1.12
COPS7A-202ENST00000455113 ABT1Q9ULW3 272 aaKnown RBP22.03■■□□□ 1.12
COPS7A-202ENST00000455113 IL15P40933 162 aaPredicted RBP22.03■■□□□ 1.12
COPS7A-202ENST00000455113 KIAA0825Q8IV33 1275 aa22.03■■□□□ 1.12
COPS7A-202ENST00000455113 VGLL2Q8N8G2 317 aa22.03■■□□□ 1.12
COPS7A-202ENST00000455113 FAM84BQ96KN1 310 aaPredicted RBP22.03■■□□□ 1.12
COPS7A-202ENST00000455113 SLC5A1P13866 664 aa22.02■■□□□ 1.12
COPS7A-202ENST00000455113 KRT26Q7Z3Y9 468 aa22.02■■□□□ 1.12
COPS7A-202ENST00000455113 SULF1Q8IWU6 871 aa22.02■■□□□ 1.12
COPS7A-202ENST00000455113 COPRSQ9NQ92 184 aa22.02■■□□□ 1.12
COPS7A-202ENST00000455113 TRPM7Q96QT4 1865 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms