RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 COA1Q9GZY4 146 aa34.77■■■■□ 3.16
SMARCC1-203ENST00000454240 NMRK2Q9NPI5 230 aa34.77■■■■□ 3.16
SMARCC1-203ENST00000454240 CIAPIN1Q6FI81 312 aa34.76■■■■□ 3.16
SMARCC1-203ENST00000454240 PODNQ7Z5L7 613 aa34.76■■■■□ 3.16
SMARCC1-203ENST00000454240 L3MBTL3Q96JM7 780 aaPredicted RBP34.76■■■■□ 3.16
SMARCC1-203ENST00000454240 RRAGCQ9HB90 399 aa34.76■■■■□ 3.16
SMARCC1-203ENST00000454240 RAD17O75943 681 aa34.75■■■■□ 3.15
SMARCC1-203ENST00000454240 RPAP2Q8IXW5 612 aaPredicted RBP34.75■■■■□ 3.15
SMARCC1-203ENST00000454240 KCNQ5Q9NR82 932 aa34.75■■■■□ 3.15
SMARCC1-203ENST00000454240 CEP126Q9P2H0 1117 aa34.75■■■■□ 3.15
SMARCC1-203ENST00000454240 SCN4AP35499 1836 aa34.74■■■■□ 3.15
SMARCC1-203ENST00000454240 POTECB2RU33 542 aa34.74■■■■□ 3.15
SMARCC1-203ENST00000454240 FGFR2P21802 821 aa34.74■■■■□ 3.15
SMARCC1-203ENST00000454240 TNIP1Q15025 636 aa34.74■■■■□ 3.15
SMARCC1-203ENST00000454240 SUPT16HQ9Y5B9 1047 aaKnown RBP34.74■■■■□ 3.15
SMARCC1-203ENST00000454240 GJA3Q9Y6H8 435 aa34.74■■■■□ 3.15
SMARCC1-203ENST00000454240 PUM3Q15397 648 aaKnown RBP34.72■■■■□ 3.15
SMARCC1-203ENST00000454240 CD209Q9NNX6 404 aa34.71■■■■□ 3.15
SMARCC1-203ENST00000454240 ZNF646O15015 1829 aaPredicted RBP34.7■■■■□ 3.15
SMARCC1-203ENST00000454240 PSMD14O00487 310 aa34.7■■■■□ 3.15
SMARCC1-203ENST00000454240 KIF3CO14782 793 aa34.7■■■■□ 3.15
SMARCC1-203ENST00000454240 VEGFAP15692 232 aaPredicted RBP34.7■■■■□ 3.15
SMARCC1-203ENST00000454240 G3BP1Q13283 466 aaKnown RBP eCLIP34.7■■■■□ 3.15
SMARCC1-203ENST00000454240 SIRT2Q8IXJ6 389 aa34.7■■■■□ 3.15
SMARCC1-203ENST00000454240 NOP58Q9Y2X3 529 aaKnown RBP34.7■■■■□ 3.15
SMARCC1-203ENST00000454240 ZNF804AQ7Z570 1209 aa34.69■■■■□ 3.14
SMARCC1-203ENST00000454240 LPIN2Q92539 896 aa34.69■■■■□ 3.14
SMARCC1-203ENST00000454240 FAM84BQ96KN1 310 aaPredicted RBP34.69■■■■□ 3.14
SMARCC1-203ENST00000454240 CRBNQ96SW2 442 aa34.69■■■■□ 3.14
SMARCC1-203ENST00000454240 SURF6O75683 361 aaKnown RBP34.68■■■■□ 3.14
SMARCC1-203ENST00000454240 VIL1P09327 827 aaKnown RBP34.67■■■■□ 3.14
SMARCC1-203ENST00000454240 IFIT1P09914 478 aaKnown RBP34.67■■■■□ 3.14
SMARCC1-203ENST00000454240 IL1R1P14778 569 aa34.67■■■■□ 3.14
SMARCC1-203ENST00000454240 SASH1O94885 1247 aa34.66■■■■□ 3.14
SMARCC1-203ENST00000454240 GYG1P46976 350 aa34.66■■■■□ 3.14
SMARCC1-203ENST00000454240 SCNN1DP51172 638 aa34.66■■■■□ 3.14
SMARCC1-203ENST00000454240 TFCP2Q12800 502 aa34.66■■■■□ 3.14
SMARCC1-203ENST00000454240 FBXO33Q7Z6M2 555 aa34.66■■■■□ 3.14
SMARCC1-203ENST00000454240 IQCA1LA6NCM1 817 aa34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 USP17L3A6NCW0 530 aa34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 USP17L4A6NCW7 530 aa34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 SLC5A1P13866 664 aa34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 HIBADHP31937 336 aaKnown RBP34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 ATP2B3Q16720 1220 aa34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 USP17L1Q7RTZ2 530 aa34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.65■■■■□ 3.14
SMARCC1-203ENST00000454240 HMMRO75330 724 aa34.64■■■■□ 3.14
SMARCC1-203ENST00000454240 GMPSP49915 693 aaPredicted RBP34.64■■■■□ 3.14
SMARCC1-203ENST00000454240 ARAP2Q8WZ64 1704 aa34.64■■■■□ 3.14
SMARCC1-203ENST00000454240 HACL1Q9UJ83 578 aa34.63■■■■□ 3.13
SMARCC1-203ENST00000454240 ZBTB12Q9Y330 459 aaPredicted RBP34.63■■■■□ 3.13
SMARCC1-203ENST00000454240 CAVIN4Q5BKX8 364 aa34.62■■■■□ 3.13
SMARCC1-203ENST00000454240 STRIP1Q5VSL9 837 aa34.62■■■■□ 3.13
SMARCC1-203ENST00000454240 TDRD7Q8NHU6 1098 aaKnown RBP34.62■■■■□ 3.13
SMARCC1-203ENST00000454240 GPRC5DQ9NZD1 345 aa34.62■■■■□ 3.13
SMARCC1-203ENST00000454240 AKAP2Q9Y2D5 859 aa34.62■■■■□ 3.13
SMARCC1-203ENST00000454240 RPS12P25398 132 aaKnown RBP34.61■■■■□ 3.13
SMARCC1-203ENST00000454240 DACT2Q5SW24 774 aa34.61■■■■□ 3.13
SMARCC1-203ENST00000454240 DPF2Q92785 391 aa34.61■■■■□ 3.13
SMARCC1-203ENST00000454240 TAF1DQ9H5J8 278 aaPredicted RBP34.61■■■■□ 3.13
SMARCC1-203ENST00000454240 ZNF609O15014 1411 aa34.61■■■■□ 3.13
SMARCC1-203ENST00000454240 LMOD1P29536 600 aaPredicted RBP34.6■■■■□ 3.13
SMARCC1-203ENST00000454240 OS9Q13438 667 aaPredicted RBP34.6■■■■□ 3.13
SMARCC1-203ENST00000454240 TTLL5Q6EMB2 1281 aa34.6■■■■□ 3.13
SMARCC1-203ENST00000454240 RSBN1LQ6PCB5 846 aaPredicted RBP34.6■■■■□ 3.13
SMARCC1-203ENST00000454240 EPS15P42566 896 aa34.59■■■■□ 3.13
SMARCC1-203ENST00000454240 BCAMP50895 628 aa34.59■■■■□ 3.13
SMARCC1-203ENST00000454240 TIMM10P62072 90 aa34.59■■■■□ 3.13
SMARCC1-203ENST00000454240 GTF2IP78347 998 aa34.59■■■■□ 3.13
SMARCC1-203ENST00000454240 VPS37DQ86XT2 251 aa34.59■■■■□ 3.13
SMARCC1-203ENST00000454240 EXOC6BQ9Y2D4 811 aa34.59■■■■□ 3.13
SMARCC1-203ENST00000454240 A0A1B0GUL7 405 aa34.58■■■■□ 3.13
SMARCC1-203ENST00000454240 EPHX2P34913 555 aa34.58■■■■□ 3.13
SMARCC1-203ENST00000454240 AGBL3Q8NEM8 1001 aa34.58■■■■□ 3.13
SMARCC1-203ENST00000454240 GMLQ99445 158 aa34.58■■■■□ 3.13
SMARCC1-203ENST00000454240 GPR108Q9NPR9 543 aa34.57■■■■□ 3.12
SMARCC1-203ENST00000454240 PCDHB15Q9Y5E8 787 aa34.57■■■■□ 3.12
SMARCC1-203ENST00000454240 HSP90AB4PQ58FF6 505 aa34.56■■■■□ 3.12
SMARCC1-203ENST00000454240 CNOT7Q9UIV1 285 aaKnown RBP34.56■■■■□ 3.12
SMARCC1-203ENST00000454240 MYH13Q9UKX3 1938 aa34.55■■■■□ 3.12
SMARCC1-203ENST00000454240 C16orf71Q8IYS4 520 aaPredicted RBP34.55■■■■□ 3.12
SMARCC1-203ENST00000454240 FBXW7Q969H0 707 aa34.55■■■■□ 3.12
SMARCC1-203ENST00000454240 FAM205AQ6ZU69 1335 aa34.55■■■■□ 3.12
SMARCC1-203ENST00000454240 TOMM70O94826 608 aa34.54■■■■□ 3.12
SMARCC1-203ENST00000454240 ADORA1P30542 326 aa34.54■■■■□ 3.12
SMARCC1-203ENST00000454240 AAMPQ13685 434 aa34.54■■■■□ 3.12
SMARCC1-203ENST00000454240 ERC1Q8IUD2 1116 aa34.54■■■■□ 3.12
SMARCC1-203ENST00000454240 MXD3Q9BW11 206 aa34.54■■■■□ 3.12
SMARCC1-203ENST00000454240 MYO3BQ8WXR4 1341 aa34.54■■■■□ 3.12
SMARCC1-203ENST00000454240 MICALL2Q8IY33 904 aa34.53■■■■□ 3.12
SMARCC1-203ENST00000454240 XAGE2Q96GT9 111 aa34.53■■■■□ 3.12
SMARCC1-203ENST00000454240 SHTN1A0MZ66 631 aa34.52■■■■□ 3.12
SMARCC1-203ENST00000454240 TNNI3KQ59H18 835 aa34.52■■■■□ 3.12
SMARCC1-203ENST00000454240 PNMA8AQ86V59 439 aaPredicted RBP34.52■■■■□ 3.12
SMARCC1-203ENST00000454240 NEUROD6Q96NK8 337 aa34.52■■■■□ 3.12
SMARCC1-203ENST00000454240 ADARB2Q9NS39 739 aaKnown RBP34.52■■■■□ 3.12
SMARCC1-203ENST00000454240 IQSEC3Q9UPP2 1182 aaPredicted RBP34.52■■■■□ 3.12
SMARCC1-203ENST00000454240 FPGT-TNNI3KV9GXZ4 949 aa34.52■■■■□ 3.12
SMARCC1-203ENST00000454240 ADAMTSL1Q8N6G6 1762 aa34.51■■■■□ 3.12
SMARCC1-203ENST00000454240 H7C1D1 291 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms