RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 MEN1O00255 615 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 GIPC1O14908 333 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 MAFGO15525 162 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 MICAL2O94851 1124 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 HNRNPUQ00839 825 aaKnown RBP eCLIP4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 RBL2Q08999 1139 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 KCNMA1Q12791 1236 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZNF394Q53GI3 561 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 XKR5Q6UX68 686 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 SV2AQ7L0J3 742 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 NOP9Q86U38 636 aaKnown RBP4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZSCAN30Q86W11 494 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 TTC16Q8NEE8 873 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 RHBDD1Q8TEB9 315 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 NLRP3Q96P20 1036 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 OSBPL7Q9BZF2 842 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 GRIP2Q9C0E4 1043 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 C12orf49Q9H741 205 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 PRDM10Q9NQV6 1147 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 BSDC1Q9NW68 430 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 RAI14Q9P0K7 980 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 DMGDHQ9UI17 866 aaKnown RBP4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 ADAMTS8Q9UP79 889 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 ZMYM3Q14202 1370 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 USP31Q70CQ4 1352 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 UHRF1BP1LA0JNW5 1464 aa4.48□□□□□ -1.69
HMGB3P8-201ENST00000449709 CNTLNQ9NXG0 1405 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 TTC36A6NLP5 189 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 TGFBR3LH3BV60 316 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 RHOQP17081 205 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 CAPN2P17655 700 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 DNAJA1P31689 397 aaKnown RBP4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 MCM5P33992 734 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 SATB1Q01826 763 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 GABPB1Q06547 395 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 DDX10Q13206 875 aaKnown RBP4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 HIF1AQ16665 826 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 HSP90AB3PQ58FF7 597 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 DNTTIP2Q5QJE6 756 aaKnown RBP4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 USPL1Q5W0Q7 1092 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 TMEM214Q6NUQ4 689 aaKnown RBP4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 USP48Q86UV5 1035 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 SVOPQ8N4V2 548 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 NGEFQ8N5V2 710 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 CCDC74AQ96AQ1 378 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 PANK2Q9BZ23 570 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 NUDCQ9Y266 331 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 INPP5FQ9Y2H2 1132 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 PCDHGB7Q9Y5F8 929 aa4.47□□□□□ -1.69
HMGB3P8-201ENST00000449709 YEATS2Q9ULM3 1422 aa4.46□□□□□ -1.69
HMGB3P8-201ENST00000449709 TNFRSF21O75509 655 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 HSP90AB1P08238 724 aaKnown RBP4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 SLURP2P0DP57 97 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 ST13P50502 369 aaKnown RBP4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 RASSF7Q02833 373 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 ARID5AQ03989 594 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 NBPF9Q3BBW0 867 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 CCDC144BQ3MJ40 725 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 CC2D1BQ5T0F9 858 aaKnown RBP4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 IER5Q5VY09 327 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 NBPF10Q6P3W6 841 aaKnown RBP4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 PI16Q6UXB8 463 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 HS2ST1Q7LGA3 356 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 LYSMD3Q7Z3D4 306 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 PRICKLE2Q7Z3G6 844 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 EPS8L3Q8TE67 593 aaKnown RBP4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 MKL1Q969V6 931 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 KLRG1Q96E93 195 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 SUSD3Q96L08 255 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 MYH16Q9H6N6 1097 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 GRPEL1Q9HAV7 217 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZFYVE28Q9HCC9 887 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 GGT7Q9UJ14 662 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 FOXD3Q9UJU5 478 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 SH3BP1Q9Y3L3 701 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 GPC6Q9Y625 555 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 NCOA3Q9Y6Q9 1424 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 KDM2BQ8NHM5 1336 aa4.46□□□□□ -1.7
HMGB3P8-201ENST00000449709 INSRP06213 1382 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 IGF1RP08069 1367 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 GDF11O95390 407 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 ADAMTS2O95450 1211 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 INPP5BP32019 993 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 GPC1P35052 558 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 IRS1P35568 1242 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 PLA2G4AP47712 749 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 RNF144AP50876 292 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 CCDC173Q0VFZ6 552 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 GAS6Q14393 721 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 TAF1CQ15572 869 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 C4orf17Q53FE4 359 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 GNASQ5JWF2 1037 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 MEI1Q5TIA1 1274 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 SASS6Q6UVJ0 657 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 TMEM151AQ8N4L1 468 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 ZNF280CQ8ND82 737 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 RHPN1Q8TCX5 695 aa4.45□□□□□ -1.7
HMGB3P8-201ENST00000449709 PDLIM2Q96JY6 352 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms