RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 A0A1W2PPC1 479 aa16.61■□□□□ 0.25
AC004540.1-204ENST00000449537 AIMP1Q12904 312 aaKnown RBP16.61■□□□□ 0.25
AC004540.1-204ENST00000449537 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
AC004540.1-204ENST00000449537 ZNF428Q96B54 188 aa16.61■□□□□ 0.25
AC004540.1-204ENST00000449537 RANBP2P49792 3224 aaKnown RBP16.61■□□□□ 0.25
AC004540.1-204ENST00000449537 SOX1O00570 391 aaPredicted RBP16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 ANXA1P04083 346 aa16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 APOBEC3FQ8IUX4 373 aaKnown RBP16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 LRCH3Q96II8 777 aa16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 CLMNQ96JQ2 1002 aa16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 HTATIP2Q9BUP3 242 aa16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 FZD1Q9UP38 647 aa16.6■□□□□ 0.25
AC004540.1-204ENST00000449537 KDM3BQ7LBC6 1761 aa16.59■□□□□ 0.25
AC004540.1-204ENST00000449537 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
AC004540.1-204ENST00000449537 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
AC004540.1-204ENST00000449537 ANKRD13DQ6ZTN6 518 aa16.59■□□□□ 0.25
AC004540.1-204ENST00000449537 FAM89AQ96GI7 184 aa16.59■□□□□ 0.25
AC004540.1-204ENST00000449537 PTPN18Q99952 460 aa16.59■□□□□ 0.25
AC004540.1-204ENST00000449537 COL25A1Q9BXS0 654 aaPredicted RBP16.59■□□□□ 0.25
AC004540.1-204ENST00000449537 UNCXA6NJT0 531 aa16.58■□□□□ 0.24
AC004540.1-204ENST00000449537 SH3TC2Q8TF17 1288 aa16.58■□□□□ 0.24
AC004540.1-204ENST00000449537 XAGE3Q8WTP9 111 aa16.58■□□□□ 0.24
AC004540.1-204ENST00000449537 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
AC004540.1-204ENST00000449537 SASH1O94885 1247 aa16.57■□□□□ 0.24
AC004540.1-204ENST00000449537 MMP14P50281 582 aa16.57■□□□□ 0.24
AC004540.1-204ENST00000449537 TESPA1A2RU30 521 aaPredicted RBP16.56■□□□□ 0.24
AC004540.1-204ENST00000449537 ZBTB7BO15156 539 aaPredicted RBP16.56■□□□□ 0.24
AC004540.1-204ENST00000449537 NKX2-3Q8TAU0 364 aa16.56■□□□□ 0.24
AC004540.1-204ENST00000449537 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
AC004540.1-204ENST00000449537 PSME4Q14997 1843 aa16.55■□□□□ 0.24
AC004540.1-204ENST00000449537 DEFB129Q9H1M3 183 aa16.55■□□□□ 0.24
AC004540.1-204ENST00000449537 ZFYVE28Q9HCC9 887 aa16.55■□□□□ 0.24
AC004540.1-204ENST00000449537 STXBP5LQ9Y2K9 1186 aa16.55■□□□□ 0.24
AC004540.1-204ENST00000449537 MYO3BQ8WXR4 1341 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 IRS4O14654 1257 aaPredicted RBP16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 NEFMP07197 916 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 ATP2B4P23634 1241 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 GPR153Q6NV75 609 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 DEFB123Q8N688 67 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 SHISA4Q96DD7 197 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
AC004540.1-204ENST00000449537 GJA5P36382 358 aa16.53■□□□□ 0.24
AC004540.1-204ENST00000449537 KIF22Q14807 665 aa16.53■□□□□ 0.24
AC004540.1-204ENST00000449537 TAF1CQ15572 869 aaPredicted RBP16.53■□□□□ 0.24
AC004540.1-204ENST00000449537 SUPT20HL1Q3ZLR7 823 aa16.53■□□□□ 0.24
AC004540.1-204ENST00000449537 COL4A1P02462 1669 aa16.53■□□□□ 0.24
AC004540.1-204ENST00000449537 XDHP47989 1333 aa16.52■□□□□ 0.24
AC004540.1-204ENST00000449537 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
AC004540.1-204ENST00000449537 MTFR1Q15390 333 aa16.52■□□□□ 0.24
AC004540.1-204ENST00000449537 STRIP1Q5VSL9 837 aa16.52■□□□□ 0.24
AC004540.1-204ENST00000449537 ISCA1Q9BUE6 129 aa16.52■□□□□ 0.24
AC004540.1-204ENST00000449537 STAP2Q9UGK3 403 aa16.52■□□□□ 0.24
AC004540.1-204ENST00000449537 ATP5J2-PTCD1G3V325 749 aa16.51■□□□□ 0.23
AC004540.1-204ENST00000449537 GNRH1P01148 92 aa16.51■□□□□ 0.23
AC004540.1-204ENST00000449537 PRMT2P55345 433 aa16.51■□□□□ 0.23
AC004540.1-204ENST00000449537 UBE2Q1Q7Z7E8 422 aa16.51■□□□□ 0.23
AC004540.1-204ENST00000449537 ANKRD13AQ8IZ07 590 aa16.51■□□□□ 0.23
AC004540.1-204ENST00000449537 ZBED3Q96IU2 234 aaPredicted RBP16.51■□□□□ 0.23
AC004540.1-204ENST00000449537 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
AC004540.1-204ENST00000449537 USP2O75604 605 aaPredicted RBP16.5■□□□□ 0.23
AC004540.1-204ENST00000449537 WDHD1O75717 1129 aaPredicted RBP16.5■□□□□ 0.23
AC004540.1-204ENST00000449537 GJA8P48165 433 aa16.5■□□□□ 0.23
AC004540.1-204ENST00000449537 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
AC004540.1-204ENST00000449537 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
AC004540.1-204ENST00000449537 PPP2R3BQ9Y5P8 575 aa16.5■□□□□ 0.23
AC004540.1-204ENST00000449537 EVI5O60447 810 aa16.49■□□□□ 0.23
AC004540.1-204ENST00000449537 GJB1P08034 283 aa16.49■□□□□ 0.23
AC004540.1-204ENST00000449537 HSP90B1P14625 803 aaKnown RBP16.49■□□□□ 0.23
AC004540.1-204ENST00000449537 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
AC004540.1-204ENST00000449537 ARHGAP39Q9C0H5 1083 aa16.49■□□□□ 0.23
AC004540.1-204ENST00000449537 LAMB1P07942 1786 aa16.49■□□□□ 0.23
AC004540.1-204ENST00000449537 COL1A1P02452 1464 aaPredicted RBP16.48■□□□□ 0.23
AC004540.1-204ENST00000449537 LACTBP83111 547 aaPredicted RBP16.48■□□□□ 0.23
AC004540.1-204ENST00000449537 DLGAP5Q15398 846 aa16.48■□□□□ 0.23
AC004540.1-204ENST00000449537 TTLL5Q6EMB2 1281 aa16.48■□□□□ 0.23
AC004540.1-204ENST00000449537 Q7L0L9 218 aa16.48■□□□□ 0.23
AC004540.1-204ENST00000449537 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
AC004540.1-204ENST00000449537 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 NBPF12Q5TAG4 269 aaPredicted RBP16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 BRI3BPQ8WY22 251 aa16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 COA1Q9GZY4 146 aa16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 ELP3Q9H9T3 547 aa16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 MTMR10Q9NXD2 777 aa16.47■□□□□ 0.23
AC004540.1-204ENST00000449537 CCL15-CCL14A0A0B4J2E2 113 aa16.46■□□□□ 0.23
AC004540.1-204ENST00000449537 FARP2O94887 1054 aaPredicted RBP16.46■□□□□ 0.23
AC004540.1-204ENST00000449537 GTF2A2P52657 109 aa16.46■□□□□ 0.23
AC004540.1-204ENST00000449537 TRIM28Q13263 835 aaKnown RBP16.46■□□□□ 0.23
AC004540.1-204ENST00000449537 CCL15Q16663 113 aa16.46■□□□□ 0.23
AC004540.1-204ENST00000449537 RNF208Q9H0X6 261 aa16.46■□□□□ 0.23
AC004540.1-204ENST00000449537 ZNF646O15015 1829 aaPredicted RBP16.46■□□□□ 0.23
AC004540.1-204ENST00000449537 TLR2O60603 784 aa16.45■□□□□ 0.22
AC004540.1-204ENST00000449537 CCL5P13501 91 aa16.45■□□□□ 0.22
AC004540.1-204ENST00000449537 NFE2L2Q16236 605 aa16.45■□□□□ 0.22
AC004540.1-204ENST00000449537 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms