RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-222ENST00000449504 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
HDLBP-222ENST00000449504 PTCH2Q9Y6C5 1203 aa9.48□□□□□ -0.89
HDLBP-222ENST00000449504 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
HDLBP-222ENST00000449504 HAX1O00165 279 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 WNT10BO00744 389 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 MNX1P50219 401 aaPredicted RBP9.47□□□□□ -0.89
HDLBP-222ENST00000449504 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
HDLBP-222ENST00000449504 OTUD7BQ6GQQ9 843 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 WNK4Q96J92 1243 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 CLMNQ96JQ2 1002 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 LAMB2P55268 1798 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 ZNF609O15014 1411 aa9.47□□□□□ -0.89
HDLBP-222ENST00000449504 ATP5J2-PTCD1G3V325 749 aa9.46□□□□□ -0.9
HDLBP-222ENST00000449504 NEFMP07197 916 aa9.46□□□□□ -0.9
HDLBP-222ENST00000449504 SH3TC2Q8TF17 1288 aa9.46□□□□□ -0.9
HDLBP-222ENST00000449504 SEC31BQ9NQW1 1179 aa9.46□□□□□ -0.9
HDLBP-222ENST00000449504 PODXL2Q9NZ53 605 aa9.46□□□□□ -0.9
HDLBP-222ENST00000449504 ANKRD36CQ5JPF3 1778 aa9.45□□□□□ -0.9
HDLBP-222ENST00000449504 ECM2O94769 699 aaPredicted RBP9.45□□□□□ -0.9
HDLBP-222ENST00000449504 ZBTB48P10074 688 aaPredicted RBP9.45□□□□□ -0.9
HDLBP-222ENST00000449504 ARHGEF6Q15052 776 aa9.45□□□□□ -0.9
HDLBP-222ENST00000449504 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
HDLBP-222ENST00000449504 APOBEC3FQ8IUX4 373 aaKnown RBP9.45□□□□□ -0.9
HDLBP-222ENST00000449504 LRCH3Q96II8 777 aa9.45□□□□□ -0.9
HDLBP-222ENST00000449504 TSPYL4Q9UJ04 414 aa9.45□□□□□ -0.9
HDLBP-222ENST00000449504 LRRC37AA6NMS7 1700 aa9.45□□□□□ -0.9
HDLBP-222ENST00000449504 SCN9AQ15858 1988 aa9.44□□□□□ -0.9
HDLBP-222ENST00000449504 MKI67P46013 3256 aaKnown RBP9.44□□□□□ -0.9
HDLBP-222ENST00000449504 SOX1O00570 391 aaPredicted RBP9.44□□□□□ -0.9
HDLBP-222ENST00000449504 IRS4O14654 1257 aaPredicted RBP9.44□□□□□ -0.9
HDLBP-222ENST00000449504 PPP1R12BO60237 982 aaPredicted RBP9.44□□□□□ -0.9
HDLBP-222ENST00000449504 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
HDLBP-222ENST00000449504 PTPN18Q99952 460 aa9.44□□□□□ -0.9
HDLBP-222ENST00000449504 COL4A1P02462 1669 aa9.44□□□□□ -0.9
HDLBP-222ENST00000449504 RBBP6Q7Z6E9 1792 aaKnown RBP9.44□□□□□ -0.9
HDLBP-222ENST00000449504 DDX60Q8IY21 1712 aaKnown RBP9.43□□□□□ -0.9
HDLBP-222ENST00000449504 GJA5P36382 358 aa9.43□□□□□ -0.9
HDLBP-222ENST00000449504 DACT2Q5SW24 774 aa9.43□□□□□ -0.9
HDLBP-222ENST00000449504 DEFB129Q9H1M3 183 aa9.43□□□□□ -0.9
HDLBP-222ENST00000449504 NR2E3Q9Y5X4 410 aa9.43□□□□□ -0.9
HDLBP-222ENST00000449504 TRIOBPQ9H2D6 2365 aa9.42□□□□□ -0.9
HDLBP-222ENST00000449504 KIAA0100Q14667 2235 aaKnown RBP9.42□□□□□ -0.9
HDLBP-222ENST00000449504 ATP2B4P23634 1241 aa9.42□□□□□ -0.9
HDLBP-222ENST00000449504 MTFR1Q15390 333 aa9.42□□□□□ -0.9
HDLBP-222ENST00000449504 TAF1CQ15572 869 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-222ENST00000449504 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
HDLBP-222ENST00000449504 ISCA1Q9BUE6 129 aa9.42□□□□□ -0.9
HDLBP-222ENST00000449504 HTATIP2Q9BUP3 242 aa9.42□□□□□ -0.9
HDLBP-222ENST00000449504 COL25A1Q9BXS0 654 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-222ENST00000449504 ZFYVE28Q9HCC9 887 aa9.42□□□□□ -0.9
HDLBP-222ENST00000449504 XDHP47989 1333 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 MAP3K11Q16584 847 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-222ENST00000449504 SHISA4Q96DD7 197 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 ARHGAP39Q9C0H5 1083 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 PRO3102Q9H379 93 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 ELP3Q9H9T3 547 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
HDLBP-222ENST00000449504 SZT2Q5T011 3432 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 MYO3BQ8WXR4 1341 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-222ENST00000449504 IREB2P48200 963 aaKnown RBP9.4□□□□□ -0.9
HDLBP-222ENST00000449504 KIF22Q14807 665 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 DLGAP5Q15398 846 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 SUPT20HL1Q3ZLR7 823 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 CCDC152Q4G0S7 254 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 NBPF12Q5TAG4 269 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-222ENST00000449504 STRIP1Q5VSL9 837 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 ANKRD18AQ8IVF6 992 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 PLBD2Q8NHP8 589 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 OPTNQ96CV9 577 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 CHPF2Q9P2E5 772 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 STAP2Q9UGK3 403 aa9.4□□□□□ -0.9
HDLBP-222ENST00000449504 CCL15-CCL14A0A0B4J2E2 113 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 CLRN2A0PK11 232 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-222ENST00000449504 USP2O75604 605 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-222ENST00000449504 PPP2R1AP30153 589 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 CCL15Q16663 113 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 TTLL5Q6EMB2 1281 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 Q7L0L9 218 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 ANKRD13AQ8IZ07 590 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 DEFB123Q8N688 67 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 VEZTQ9HBM0 779 aa9.39□□□□□ -0.91
HDLBP-222ENST00000449504 A0A1W2PPC1 479 aa9.38□□□□□ -0.91
HDLBP-222ENST00000449504 F8W031 263 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-222ENST00000449504 WDHD1O75717 1129 aaPredicted RBP9.38□□□□□ -0.91
HDLBP-222ENST00000449504 FXR2P51116 673 aaKnown RBP eCLIP9.38□□□□□ -0.912e-7■■□□□ 11.5
HDLBP-222ENST00000449504 GTF2IP78347 998 aa9.38□□□□□ -0.91
HDLBP-222ENST00000449504 EVX2Q03828 476 aa9.38□□□□□ -0.91
HDLBP-222ENST00000449504 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
HDLBP-222ENST00000449504 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
HDLBP-222ENST00000449504 NKX2-3Q8TAU0 364 aa9.38□□□□□ -0.91
HDLBP-222ENST00000449504 BRI3BPQ8WY22 251 aa9.38□□□□□ -0.91
HDLBP-222ENST00000449504 ZBED3Q96IU2 234 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms