RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GLRX3O76003 335 aaKnown RBP15.71■□□□□ 0.11
SYNGAP1-204ENST00000449372 HSPA4P34932 840 aa15.71■□□□□ 0.11
SYNGAP1-204ENST00000449372 GOLGA5Q8TBA6 731 aa15.71■□□□□ 0.11
SYNGAP1-204ENST00000449372 ATP2B1P20020 1258 aa15.71■□□□□ 0.1
SYNGAP1-204ENST00000449372 TMCO3Q6UWJ1 677 aa15.71■□□□□ 0.1
SYNGAP1-204ENST00000449372 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.71■□□□□ 0.1
SYNGAP1-204ENST00000449372 GRM8O00222 908 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 KRT85P78386 507 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 NYAP1Q6ZVC0 841 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 ZCRB1Q8TBF4 217 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 FMNL2Q96PY5 1086 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 ZCCHC17Q9NP64 241 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 ITGB4P16144 1822 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 PACS2Q86VP3 889 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 SUCLG2Q96I99 432 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 NEURL1BA8MQ27 555 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 ERVV-2B6SEH9 535 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 ZNF75DP51815 510 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 CLIP2Q9UDT6 1046 aa15.7■□□□□ 0.1
SYNGAP1-204ENST00000449372 DISP2A7MBM2 1401 aa15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 NRDCO43847 1150 aa15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 METTL22Q9BUU2 404 aaPredicted RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 CLASRPQ8N2M8 674 aaKnown RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 ARGLU1Q9NWB6 273 aaPredicted RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 TRMT1Q9NXH9 659 aaKnown RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 LARP1Q6PKG0 1096 aaKnown RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 AK7Q96M32 723 aa15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 UPF3BQ9BZI7 483 aaKnown RBP15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 TTC41PQ6P2S7 1318 aa15.69■□□□□ 0.1
SYNGAP1-204ENST00000449372 E2F4Q16254 413 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 ARHGAP29Q52LW3 1261 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 TOM1L2Q6ZVM7 507 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 RPAP1Q9BWH6 1393 aaPredicted RBP15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 F13A1P00488 732 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 CABP4P57796 275 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 CCDC91Q7Z6B0 441 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 LTBP4Q8N2S1 1624 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 IL2RBP14784 551 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 DHX8Q14562 1220 aaKnown RBP15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 CXorf56Q9H5V9 222 aa15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.68■□□□□ 0.1
SYNGAP1-204ENST00000449372 GCKRQ14397 625 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 PLA2G4DQ86XP0 818 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 DONSONQ9NYP3 566 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 ZRANB2O95218 330 aaKnown RBP eCLIP15.67■□□□□ 0.13e-6■■■■■ 27.8
SYNGAP1-204ENST00000449372 MAGEA9P43362 315 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 TSGA10IPQ3SY00 556 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 NUTM1Q86Y26 1132 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 IL25Q9H293 177 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 LRP6O75581 1613 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 NBPF26B4DH59 902 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 MYL6BP14649 208 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 OAS2P29728 719 aaKnown RBP15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 AIMP1Q12904 312 aaKnown RBP15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 CCDC144BQ3MJ40 725 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 NBPF14Q5TI25 921 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 NBPF10Q6P3W6 841 aaKnown RBP15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 LRRC8AQ8IWT6 810 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 CCDC144CPQ8IYA2 1237 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 NBPF15Q8N660 670 aa15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 BICC1Q9H694 974 aaKnown RBP15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 C9orf78Q9NZ63 289 aaPredicted RBP15.67■□□□□ 0.1
SYNGAP1-204ENST00000449372 CASP7P55210 303 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 TM6SF1Q9BZW5 370 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 FILIP1Q7Z7B0 1213 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 TTC5Q8N0Z6 440 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 SKILP12757 684 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 LMAN1P49257 510 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 TYRO3Q06418 890 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 MRVI1Q9Y6F6 885 aa15.66■□□□□ 0.1
SYNGAP1-204ENST00000449372 SGSM2O43147 1006 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 ANKRD13DQ6ZTN6 518 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 CBX8Q9HC52 389 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 DDX19AQ9NUU7 478 aaKnown RBP15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 EPHA10Q5JZY3 1008 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 NUP62CLQ9H1M0 184 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 SASH1O94885 1247 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 NRAPQ86VF7 1730 aa15.65■□□□□ 0.1
SYNGAP1-204ENST00000449372 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 PA2G4Q9UQ80 394 aaKnown RBP15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 VPS37CA5D8V6 355 aaPredicted RBP15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 KIF2AO00139 706 aaPredicted RBP15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 NEMFO60524 1076 aa15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 CASTP20810 708 aaKnown RBP15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 PIP4K2AP48426 406 aaPredicted RBP15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 SATB1Q01826 763 aa15.64■□□□□ 0.09
SYNGAP1-204ENST00000449372 CAMK4Q16566 473 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms