RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 SMYD5Q6GMV2 418 aa9.08□□□□□ -0.96
TRIM4-204ENST00000447480 GPT2Q8TD30 523 aa9.08□□□□□ -0.96
TRIM4-204ENST00000447480 AK7Q96M32 723 aa9.08□□□□□ -0.96
TRIM4-204ENST00000447480 STK32BQ9NY57 414 aa9.08□□□□□ -0.96
TRIM4-204ENST00000447480 DBF4Q9UBU7 674 aaPredicted RBP9.08□□□□□ -0.96
TRIM4-204ENST00000447480 SEPT9Q9UHD8 586 aaPredicted RBP9.08□□□□□ -0.96
TRIM4-204ENST00000447480 COL5A3P25940 1745 aaPredicted RBP9.08□□□□□ -0.96
TRIM4-204ENST00000447480 QSER1Q2KHR3 1735 aa9.08□□□□□ -0.96
TRIM4-204ENST00000447480 AOX1Q06278 1338 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 KCPQ6ZWJ8 1503 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 GOLGA8CPA6NN73 597 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 KCNQ2O43526 872 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 PTCD1O75127 700 aaKnown RBP9.07□□□□□ -0.96
TRIM4-204ENST00000447480 GIGYF1O75420 1035 aaPredicted RBP9.07□□□□□ -0.96
TRIM4-204ENST00000447480 ZSCAN20P17040 1043 aaPredicted RBP9.07□□□□□ -0.96
TRIM4-204ENST00000447480 GABPB1Q06547 395 aaPredicted RBP9.07□□□□□ -0.96
TRIM4-204ENST00000447480 PTGDRQ13258 359 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 DHX8Q14562 1220 aaKnown RBP9.07□□□□□ -0.96
TRIM4-204ENST00000447480 TXNRD1Q16881 649 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 CCDC183Q5T5S1 534 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 PACS2Q86VP3 889 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 TSR2Q969E8 191 aaKnown RBP9.07□□□□□ -0.96
TRIM4-204ENST00000447480 HYPKQ9NX55 129 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 PODXL2Q9NZ53 605 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 ASAP1Q9ULH1 1129 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 ZNF652Q9Y2D9 606 aa9.07□□□□□ -0.96
TRIM4-204ENST00000447480 C3orf80F5H4A9 247 aa9.06□□□□□ -0.96
TRIM4-204ENST00000447480 CTIFO43310 598 aaKnown RBP9.06□□□□□ -0.96
TRIM4-204ENST00000447480 CD2BP2O95400 341 aaKnown RBP9.06□□□□□ -0.96
TRIM4-204ENST00000447480 IL6STP40189 918 aaPredicted RBP9.06□□□□□ -0.96
TRIM4-204ENST00000447480 FAM182BQ5T319 152 aa9.06□□□□□ -0.96
TRIM4-204ENST00000447480 PADI6Q6TGC4 694 aa9.06□□□□□ -0.96
TRIM4-204ENST00000447480 ZNF496Q96IT1 587 aaPredicted RBP9.06□□□□□ -0.96
TRIM4-204ENST00000447480 THUMPD2Q9BTF0 503 aaKnown RBP9.06□□□□□ -0.96
TRIM4-204ENST00000447480 TMEM63CQ9P1W3 806 aa9.06□□□□□ -0.96
TRIM4-204ENST00000447480 RTCBQ9Y3I0 505 aaKnown RBP9.06□□□□□ -0.96
TRIM4-204ENST00000447480 EP400Q96L91 3159 aa9.06□□□□□ -0.96
TRIM4-204ENST00000447480 C4BP0C0L5 1744 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 SMAPO00193 183 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 TUBB4AP04350 444 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 HSP90B1P14625 803 aaKnown RBP9.05□□□□□ -0.96
TRIM4-204ENST00000447480 MX1P20591 662 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 RBM10P98175 930 aaKnown RBP9.05□□□□□ -0.96
TRIM4-204ENST00000447480 SLC39A6Q13433 755 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 HSP90AB3PQ58FF7 597 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 KIF6Q6ZMV9 814 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 SIRT2Q8IXJ6 389 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 WNT2BQ93097 391 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 CCDC87Q9NVE4 849 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 OGFRQ9NZT2 677 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 HDAC5Q9UQL6 1122 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 ZDHHC9Q9Y397 364 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 PAXBP1Q9Y5B6 917 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 TJP1Q07157 1748 aa9.05□□□□□ -0.96
TRIM4-204ENST00000447480 NEMFO60524 1076 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 KDM4AO75164 1064 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 GSPT1P15170 499 aaKnown RBP9.04□□□□□ -0.96
TRIM4-204ENST00000447480 UBE2HP62256 183 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 DNTTIP2Q5QJE6 756 aaKnown RBP9.04□□□□□ -0.96
TRIM4-204ENST00000447480 LAPTM4BQ86VI4 370 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 SLC16A10Q8TF71 515 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 ANKRD7Q92527 254 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 DDX21Q9NR30 783 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRIM4-204ENST00000447480 TFCP2L1Q9NZI6 479 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 RBM27Q9P2N5 1060 aaKnown RBP9.04□□□□□ -0.96
TRIM4-204ENST00000447480 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
TRIM4-204ENST00000447480 NUP188Q5SRE5 1749 aa9.04□□□□□ -0.96
TRIM4-204ENST00000447480 SYCE3A1L190 88 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 SOCS7O14512 581 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 ZPR1O75312 459 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 RPS6KA4O75676 772 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 CYP19A1P11511 503 aaPredicted RBP9.03□□□□□ -0.96
TRIM4-204ENST00000447480 SDSP20132 328 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 NEXNQ0ZGT2 675 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 TRAPPC3LQ5T215 181 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 RNF20Q5VTR2 975 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.03□□□□□ -0.96
TRIM4-204ENST00000447480 TTC13Q8NBP0 860 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 KIAA1524Q8TCG1 905 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 TMX3Q96JJ7 454 aa9.03□□□□□ -0.96
TRIM4-204ENST00000447480 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.03□□□□□ -0.96
TRIM4-204ENST00000447480 EIF2S2P20042 333 aaKnown RBP9.02□□□□□ -0.97
TRIM4-204ENST00000447480 RFC4P35249 363 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 CRKLP46109 303 aaKnown RBP9.02□□□□□ -0.97
TRIM4-204ENST00000447480 CCT4P50991 539 aaKnown RBP9.02□□□□□ -0.97
TRIM4-204ENST00000447480 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 DNAJC10Q8IXB1 793 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 TATDN2Q93075 761 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 ZFRQ96KR1 1074 aaKnown RBP9.02□□□□□ -0.97
TRIM4-204ENST00000447480 TSPYL1Q9H0U9 437 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 MIS18AQ9NYP9 233 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 CGNQ9P2M7 1197 aaKnown RBP9.02□□□□□ -0.97
TRIM4-204ENST00000447480 STAP2Q9UGK3 403 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 PNMA3Q9UL41 463 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 UBR3Q6ZT12 1888 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 CCDC171Q6TFL3 1326 aa9.02□□□□□ -0.97
TRIM4-204ENST00000447480 CCDC66A2RUB6 948 aa9.01□□□□□ -0.97
TRIM4-204ENST00000447480 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms