RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 BAG6P46379 1132 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 PTPN14Q15678 1187 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 TCIRG1Q13488 830 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
FN1-212ENST00000446046 NEO1Q92859 1461 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 SMARCA5O60264 1052 aaPredicted RBP13.34□□□□□ -0.27
FN1-212ENST00000446046 F8W031 263 aaPredicted RBP13.34□□□□□ -0.27
FN1-212ENST00000446046 HS2ST1Q7LGA3 356 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 NFATC2IPQ8NCF5 419 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 PAG1Q9NWQ8 432 aa13.34□□□□□ -0.27
FN1-212ENST00000446046 HACE1Q8IYU2 909 aa13.33□□□□□ -0.27
FN1-212ENST00000446046 TCHPQ9BT92 498 aa13.33□□□□□ -0.27
FN1-212ENST00000446046 ZNF354CQ86Y25 554 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 IP6K1Q92551 441 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
FN1-212ENST00000446046 NCKAP5LQ9HCH0 1330 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 DPY19L2Q6NUT2 758 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 RGS22Q8NE09 1264 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 CCNL1Q9UK58 526 aaPredicted RBP13.33□□□□□ -0.28
FN1-212ENST00000446046 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 BICDL2A1A5D9 508 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 PRAG1Q86YV5 1406 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 SMC1AQ14683 1233 aaKnown RBP13.33□□□□□ -0.28
FN1-212ENST00000446046 TBX22Q9Y458 520 aa13.33□□□□□ -0.28
FN1-212ENST00000446046 IRS4O14654 1257 aaPredicted RBP13.32□□□□□ -0.28
FN1-212ENST00000446046 CCDC144CPQ8IYA2 1237 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 PSMA7O14818 248 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 UBE2HP62256 183 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 LINS1Q8NG48 757 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 GRPEL1Q9HAV7 217 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 KCNG1Q9UIX4 513 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 SLU7O95391 586 aaKnown RBP13.32□□□□□ -0.28
FN1-212ENST00000446046 GCP02774 474 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 FAM13AO94988 1023 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 SPAG1Q07617 926 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 PPP1R2P41236 205 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 TRIM47Q96LD4 638 aa13.32□□□□□ -0.28
FN1-212ENST00000446046 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
FN1-212ENST00000446046 H7C1D1 291 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 SYKP43405 635 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 GUCY1B3Q02153 619 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 TNFAIP1Q13829 316 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 RASAL2Q9UJF2 1139 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 HECW2Q9P2P5 1572 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 KRT2P35908 639 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 SMTNP53814 917 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 SLC9C2Q5TAH2 1124 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 YEATS2Q9ULM3 1422 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 CCDC113Q9H0I3 377 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 FAM193AP78312 1265 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 KIAA1524Q8TCG1 905 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 GGA1Q9UJY5 639 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 TAF3Q5VWG9 929 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 MAGEB6Q8N7X4 407 aa13.31□□□□□ -0.28
FN1-212ENST00000446046 GABPB2Q8TAK5 448 aaPredicted RBP13.31□□□□□ -0.28
FN1-212ENST00000446046 ALG1Q9BT22 464 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 NIM1KQ8IY84 436 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 TBC1D22AQ8WUA7 517 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 CCDC102AQ96A19 550 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 JAKMIP2Q96AA8 810 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 MAPKBP1O60336 1514 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 CAMK4Q16566 473 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 SPHKAPQ2M3C7 1700 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 ATP2A1O14983 1001 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 KIAA0753Q2KHM9 967 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 RFX1P22670 979 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 TUBB4BP68371 445 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 SPECC1Q5M775 1068 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 LMBR1Q8WVP7 490 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 LPXNO60711 386 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 PUM3Q15397 648 aaKnown RBP13.3□□□□□ -0.28
FN1-212ENST00000446046 RRAGBQ5VZM2 374 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 SHTN1A0MZ66 631 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 HAND2P61296 217 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 RBM26Q5T8P6 1007 aaKnown RBP13.3□□□□□ -0.28
FN1-212ENST00000446046 SNRKQ9NRH2 765 aa13.3□□□□□ -0.28
FN1-212ENST00000446046 MCM4P33991 863 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 CYLC1P35663 651 aaPredicted RBP13.29□□□□□ -0.28
FN1-212ENST00000446046 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 PARP1P09874 1014 aaKnown RBP13.29□□□□□ -0.28
FN1-212ENST00000446046 GJB2P29033 226 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 USP21Q9UK80 565 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 PNMA2Q9UL42 364 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 RPL13P26373 211 aaKnown RBP13.29□□□□□ -0.28
FN1-212ENST00000446046 ZCCHC11Q5TAX3 1644 aaKnown RBP13.29□□□□□ -0.28
FN1-212ENST00000446046 M0QZ92 97 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 DTHD1Q6ZMT9 781 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
FN1-212ENST00000446046 CKAP4Q07065 602 aaKnown RBP13.29□□□□□ -0.28
FN1-212ENST00000446046 TTC22Q5TAA0 569 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 KRT79Q5XKE5 535 aa13.29□□□□□ -0.28
FN1-212ENST00000446046 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 190.1 ms