RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 CELF2O95319 508 aaKnown RBP25.31■■□□□ 1.64
LRCH3-208ENST00000443727 EGFRP00533 1210 aa25.31■■□□□ 1.64
LRCH3-208ENST00000443727 PAXIP1Q6ZW49 1069 aaPredicted RBP25.31■■□□□ 1.64
LRCH3-208ENST00000443727 TXNRD3Q86VQ6 643 aa25.31■■□□□ 1.64
LRCH3-208ENST00000443727 DCPSQ96C86 337 aaKnown RBP25.31■■□□□ 1.64
LRCH3-208ENST00000443727 ZNF408Q9H9D4 720 aa25.31■■□□□ 1.64
LRCH3-208ENST00000443727 RASSF10A6NK89 507 aa25.3■■□□□ 1.64
LRCH3-208ENST00000443727 USP17L8P0C7I0 530 aa25.3■■□□□ 1.64
LRCH3-208ENST00000443727 HSPA1AP0DMV8 641 aaKnown RBP25.3■■□□□ 1.64
LRCH3-208ENST00000443727 HSPA1BP0DMV9 641 aaKnown RBP25.3■■□□□ 1.64
LRCH3-208ENST00000443727 CST9Q5W186 159 aa25.3■■□□□ 1.64
LRCH3-208ENST00000443727 USP48Q86UV5 1035 aa25.3■■□□□ 1.64
LRCH3-208ENST00000443727 PLIN1O60240 522 aa25.29■■□□□ 1.64
LRCH3-208ENST00000443727 KLRK1P26718 216 aa25.29■■□□□ 1.64
LRCH3-208ENST00000443727 MIER1Q8N108 512 aa25.29■■□□□ 1.64
LRCH3-208ENST00000443727 UTYO14607 1347 aa25.29■■□□□ 1.64
LRCH3-208ENST00000443727 KRT26Q7Z3Y9 468 aa25.28■■□□□ 1.64
LRCH3-208ENST00000443727 ZNF280AP59817 542 aaPredicted RBP25.27■■□□□ 1.64
LRCH3-208ENST00000443727 STRIP1Q5VSL9 837 aa25.27■■□□□ 1.64
LRCH3-208ENST00000443727 KAZALD1Q96I82 304 aa25.27■■□□□ 1.64
LRCH3-208ENST00000443727 BICC1Q9H694 974 aaKnown RBP25.27■■□□□ 1.64
LRCH3-208ENST00000443727 SNAP23O00161 211 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 GRM1Q13255 1194 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 DACT2Q5SW24 774 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 OGFOD1Q8N543 542 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 GMLQ99445 158 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 MYOZ2Q9NPC6 264 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 ZNF609O15014 1411 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 PCNTO95613 3336 aa25.26■■□□□ 1.63
LRCH3-208ENST00000443727 TTLL5Q6EMB2 1281 aa25.25■■□□□ 1.63
LRCH3-208ENST00000443727 SULF1Q8IWU6 871 aa25.25■■□□□ 1.63
LRCH3-208ENST00000443727 MXD3Q9BW11 206 aa25.25■■□□□ 1.63
LRCH3-208ENST00000443727 GGA3Q9NZ52 723 aa25.25■■□□□ 1.63
LRCH3-208ENST00000443727 NOB1Q9ULX3 412 aaKnown RBP25.25■■□□□ 1.63
LRCH3-208ENST00000443727 TLL2Q9Y6L7 1015 aa25.25■■□□□ 1.63
LRCH3-208ENST00000443727 MYO3BQ8WXR4 1341 aa25.25■■□□□ 1.63
LRCH3-208ENST00000443727 WDR33Q9C0J8 1336 aaKnown RBP25.25■■□□□ 1.63
LRCH3-208ENST00000443727 ECE1P42892 770 aa25.24■■□□□ 1.63
LRCH3-208ENST00000443727 SCARF1Q14162 830 aa25.24■■□□□ 1.63
LRCH3-208ENST00000443727 ZNF804AQ7Z570 1209 aa25.24■■□□□ 1.63
LRCH3-208ENST00000443727 USP44Q9H0E7 712 aa25.24■■□□□ 1.63
LRCH3-208ENST00000443727 TRPM7Q96QT4 1865 aa25.23■■□□□ 1.63
LRCH3-208ENST00000443727 GTF2IP78347 998 aa25.23■■□□□ 1.63
LRCH3-208ENST00000443727 AIDAQ96BJ3 306 aa25.23■■□□□ 1.63
LRCH3-208ENST00000443727 API5Q9BZZ5 524 aaKnown RBP25.23■■□□□ 1.63
LRCH3-208ENST00000443727 CD209Q9NNX6 404 aa25.23■■□□□ 1.63
LRCH3-208ENST00000443727 ADM5C9JUS6 153 aa25.22■■□□□ 1.63
LRCH3-208ENST00000443727 RABL6Q3YEC7 729 aaPredicted RBP25.22■■□□□ 1.63
LRCH3-208ENST00000443727 DLK2Q6UY11 383 aa25.22■■□□□ 1.63
LRCH3-208ENST00000443727 C15orf52Q6ZUT6 534 aaKnown RBP25.22■■□□□ 1.63
LRCH3-208ENST00000443727 CAPNS2Q96L46 248 aa25.22■■□□□ 1.63
LRCH3-208ENST00000443727 PSME4Q14997 1843 aa25.21■■□□□ 1.63
LRCH3-208ENST00000443727 ASTN2O75129 1339 aaPredicted RBP25.21■■□□□ 1.63
LRCH3-208ENST00000443727 ANGEL2Q5VTE6 544 aaKnown RBP25.21■■□□□ 1.63
LRCH3-208ENST00000443727 CYP4F22Q6NT55 531 aa25.21■■□□□ 1.63
LRCH3-208ENST00000443727 SAPCD2Q86UD0 394 aa25.21■■□□□ 1.63
LRCH3-208ENST00000443727 ANKRD44Q8N8A2 993 aa25.21■■□□□ 1.63
LRCH3-208ENST00000443727 PUS3Q9BZE2 481 aaKnown RBP25.21■■□□□ 1.63
LRCH3-208ENST00000443727 RARSP54136 660 aaKnown RBP25.2■■□□□ 1.62
LRCH3-208ENST00000443727 HDAC9Q9UKV0 1011 aa25.2■■□□□ 1.62
LRCH3-208ENST00000443727 MROH5Q6ZUA9 1318 aa25.19■■□□□ 1.62
LRCH3-208ENST00000443727 HNRNPUQ00839 825 aaKnown RBP eCLIP25.19■■□□□ 1.62
LRCH3-208ENST00000443727 KIAA0825Q8IV33 1275 aa25.19■■□□□ 1.62
LRCH3-208ENST00000443727 MMP14P50281 582 aa25.18■■□□□ 1.62
LRCH3-208ENST00000443727 BRPF1P55201 1214 aaPredicted RBP25.18■■□□□ 1.62
LRCH3-208ENST00000443727 KIF16BQ96L93 1317 aa25.17■■□□□ 1.62
LRCH3-208ENST00000443727 IRS2Q9Y4H2 1338 aa25.17■■□□□ 1.62
LRCH3-208ENST00000443727 UBTFL1P0CB47 393 aaPredicted RBP25.17■■□□□ 1.62
LRCH3-208ENST00000443727 MAP2K1Q02750 393 aaPredicted RBP25.17■■□□□ 1.62
LRCH3-208ENST00000443727 UBE4AQ14139 1066 aa25.17■■□□□ 1.62
LRCH3-208ENST00000443727 METTL24Q5JXM2 366 aa25.17■■□□□ 1.62
LRCH3-208ENST00000443727 COL13A1Q5TAT6 717 aaPredicted RBP25.17■■□□□ 1.62
LRCH3-208ENST00000443727 C2orf69Q8N8R5 385 aa25.17■■□□□ 1.62
LRCH3-208ENST00000443727 RIPOR2Q9Y4F9 1068 aa25.17■■□□□ 1.62
LRCH3-208ENST00000443727 IL1R1P14778 569 aa25.16■■□□□ 1.62
LRCH3-208ENST00000443727 HUNKP57058 714 aa25.16■■□□□ 1.62
LRCH3-208ENST00000443727 GBA2Q9HCG7 927 aaPredicted RBP25.16■■□□□ 1.62
LRCH3-208ENST00000443727 NBPF9Q3BBW0 867 aa25.15■■□□□ 1.62
LRCH3-208ENST00000443727 LRRC24Q50LG9 513 aa25.15■■□□□ 1.62
LRCH3-208ENST00000443727 IFFO2Q5TF58 517 aa25.15■■□□□ 1.62
LRCH3-208ENST00000443727 CDCA5Q96FF9 252 aa25.15■■□□□ 1.62
LRCH3-208ENST00000443727 HHIPL1Q96JK4 782 aa25.15■■□□□ 1.62
LRCH3-208ENST00000443727 WBP1LQ9NX94 342 aa25.15■■□□□ 1.62
LRCH3-208ENST00000443727 HDAC5Q9UQL6 1122 aa25.15■■□□□ 1.62
LRCH3-208ENST00000443727 PITPNM2Q9BZ72 1349 aa25.14■■□□□ 1.62
LRCH3-208ENST00000443727 FOXN1O15353 648 aa25.14■■□□□ 1.62
LRCH3-208ENST00000443727 KLHDC4Q8TBB5 520 aa25.14■■□□□ 1.62
LRCH3-208ENST00000443727 BEGAINQ9BUH8 593 aa25.14■■□□□ 1.62
LRCH3-208ENST00000443727 JAG2Q9Y219 1238 aa25.14■■□□□ 1.62
LRCH3-208ENST00000443727 POLR2AP24928 1970 aaKnown RBP25.13■■□□□ 1.61
LRCH3-208ENST00000443727 WNT10BO00744 389 aa25.13■■□□□ 1.61
LRCH3-208ENST00000443727 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
LRCH3-208ENST00000443727 SASH1O94885 1247 aa25.13■■□□□ 1.61
LRCH3-208ENST00000443727 HIBADHP31937 336 aaKnown RBP25.13■■□□□ 1.61
LRCH3-208ENST00000443727 GYG1P46976 350 aa25.13■■□□□ 1.61
LRCH3-208ENST00000443727 VPS37DQ86XT2 251 aa25.13■■□□□ 1.61
LRCH3-208ENST00000443727 ARHGAP45Q92619 1136 aa25.13■■□□□ 1.61
LRCH3-208ENST00000443727 A0A1B0GUL6 1792 aa25.13■■□□□ 1.61
LRCH3-208ENST00000443727 F8W031 263 aaPredicted RBP25.12■■□□□ 1.61
LRCH3-208ENST00000443727 AOC2O75106 756 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms