RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CCDC85AQ96PX6 553 aaPredicted RBP18.17■□□□□ 0.5
LINC00642-202ENST00000442515 DBF4Q9UBU7 674 aaPredicted RBP18.17■□□□□ 0.5
LINC00642-202ENST00000442515 ANGEL1Q9UNK9 670 aaKnown RBP18.17■□□□□ 0.5
LINC00642-202ENST00000442515 COLQQ9Y215 455 aaPredicted RBP18.17■□□□□ 0.5
LINC00642-202ENST00000442515 IGF2BP3O00425 579 aaKnown RBP eCLIP18.16■□□□□ 0.5
LINC00642-202ENST00000442515 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
LINC00642-202ENST00000442515 APOBEC3FQ8IUX4 373 aaKnown RBP18.16■□□□□ 0.5
LINC00642-202ENST00000442515 FBXW7Q969H0 707 aa18.16■□□□□ 0.5
LINC00642-202ENST00000442515 FZD1Q9UP38 647 aa18.16■□□□□ 0.5
LINC00642-202ENST00000442515 MYO3BQ8WXR4 1341 aa18.16■□□□□ 0.5
LINC00642-202ENST00000442515 PSME4Q14997 1843 aa18.16■□□□□ 0.5
LINC00642-202ENST00000442515 MED23Q9ULK4 1368 aa18.16■□□□□ 0.5
LINC00642-202ENST00000442515 WTIPA6NIX2 430 aaPredicted RBP18.15■□□□□ 0.5
LINC00642-202ENST00000442515 CHL1O00533 1208 aa18.15■□□□□ 0.5
LINC00642-202ENST00000442515 TMPOP42166 694 aaKnown RBP18.15■□□□□ 0.5
LINC00642-202ENST00000442515 ANKRD18AQ8IVF6 992 aa18.15■□□□□ 0.5
LINC00642-202ENST00000442515 CD99L2Q8TCZ2 262 aa18.15■□□□□ 0.5
LINC00642-202ENST00000442515 ERO1AQ96HE7 468 aa18.15■□□□□ 0.5
LINC00642-202ENST00000442515 KIAA0100Q14667 2235 aaKnown RBP18.14■□□□□ 0.49
LINC00642-202ENST00000442515 HOXB7P09629 217 aa18.14■□□□□ 0.49
LINC00642-202ENST00000442515 INHBEP58166 350 aa18.14■□□□□ 0.49
LINC00642-202ENST00000442515 HYPKQ9NX55 129 aa18.14■□□□□ 0.49
LINC00642-202ENST00000442515 PDE8AO60658 829 aa18.13■□□□□ 0.49
LINC00642-202ENST00000442515 ZBTB48P10074 688 aaPredicted RBP18.13■□□□□ 0.49
LINC00642-202ENST00000442515 STRIP1Q5VSL9 837 aa18.13■□□□□ 0.49
LINC00642-202ENST00000442515 WNK4Q96J92 1243 aa18.13■□□□□ 0.49
LINC00642-202ENST00000442515 EFCC1Q9HA90 598 aa18.13■□□□□ 0.49
LINC00642-202ENST00000442515 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.13■□□□□ 0.49
LINC00642-202ENST00000442515 A0A0C4DFX4 3053 aa18.12■□□□□ 0.49
LINC00642-202ENST00000442515 RBBP6Q7Z6E9 1792 aaKnown RBP18.12■□□□□ 0.49
LINC00642-202ENST00000442515 CAP1Q01518 475 aa18.12■□□□□ 0.49
LINC00642-202ENST00000442515 CRHR2Q13324 411 aa18.12■□□□□ 0.49
LINC00642-202ENST00000442515 RIC3Q7Z5B4 369 aa18.12■□□□□ 0.49
LINC00642-202ENST00000442515 SLC10A4Q96EP9 437 aa18.12■□□□□ 0.49
LINC00642-202ENST00000442515 CLMNQ96JQ2 1002 aa18.12■□□□□ 0.49
LINC00642-202ENST00000442515 LAS1LQ9Y4W2 734 aaKnown RBP18.12■□□□□ 0.49
LINC00642-202ENST00000442515 COL1A1P02452 1464 aaPredicted RBP18.12■□□□□ 0.49
LINC00642-202ENST00000442515 PCCAP05165 728 aaPredicted RBP18.11■□□□□ 0.49
LINC00642-202ENST00000442515 GOLGA2Q08379 1002 aa18.11■□□□□ 0.49
LINC00642-202ENST00000442515 MAP3K11Q16584 847 aa18.11■□□□□ 0.49
LINC00642-202ENST00000442515 KIAA0825Q8IV33 1275 aa18.11■□□□□ 0.49
LINC00642-202ENST00000442515 JARID2Q92833 1246 aaPredicted RBP18.11■□□□□ 0.49
LINC00642-202ENST00000442515 ZBED3Q96IU2 234 aaPredicted RBP18.11■□□□□ 0.49
LINC00642-202ENST00000442515 ZNF333Q96JL9 665 aa18.11■□□□□ 0.49
LINC00642-202ENST00000442515 MYD88Q99836 296 aa18.11■□□□□ 0.49
LINC00642-202ENST00000442515 TMEM106CQ9BVX2 250 aa18.11■□□□□ 0.49
LINC00642-202ENST00000442515 SSC5DA1L4H1 1573 aa18.11■□□□□ 0.49
LINC00642-202ENST00000442515 LAMA3Q16787 3333 aa18.1■□□□□ 0.49
LINC00642-202ENST00000442515 MMP14P50281 582 aa18.1■□□□□ 0.49
LINC00642-202ENST00000442515 CDC5LQ99459 802 aaKnown RBP18.1■□□□□ 0.49
LINC00642-202ENST00000442515 COA1Q9GZY4 146 aa18.1■□□□□ 0.49
LINC00642-202ENST00000442515 DEFB129Q9H1M3 183 aa18.1■□□□□ 0.49
LINC00642-202ENST00000442515 COL6A3P12111 3177 aa18.1■□□□□ 0.49
LINC00642-202ENST00000442515 NEUROD2Q15784 382 aa18.09■□□□□ 0.49
LINC00642-202ENST00000442515 CCDC191Q8NCU4 936 aa18.09■□□□□ 0.49
LINC00642-202ENST00000442515 MINPP1Q9UNW1 487 aa18.09■□□□□ 0.49
LINC00642-202ENST00000442515 TRIOBPQ9H2D6 2365 aa18.08■□□□□ 0.48
LINC00642-202ENST00000442515 CCT4P50991 539 aaKnown RBP18.08■□□□□ 0.48
LINC00642-202ENST00000442515 SP3Q02447 781 aa18.08■□□□□ 0.48
LINC00642-202ENST00000442515 DUSP27Q5VZP5 1158 aa18.08■□□□□ 0.48
LINC00642-202ENST00000442515 TXNRD3Q86VQ6 643 aa18.08■□□□□ 0.48
LINC00642-202ENST00000442515 BSDC1Q9NW68 430 aaPredicted RBP18.08■□□□□ 0.48
LINC00642-202ENST00000442515 CWC25Q9NXE8 425 aaPredicted RBP18.08■□□□□ 0.48
LINC00642-202ENST00000442515 ZNF646O15015 1829 aaPredicted RBP18.07■□□□□ 0.48
LINC00642-202ENST00000442515 H0YGN5 161 aa18.07■□□□□ 0.48
LINC00642-202ENST00000442515 PPP1R12BO60237 982 aaPredicted RBP18.07■□□□□ 0.48
LINC00642-202ENST00000442515 GJA5P36382 358 aa18.07■□□□□ 0.48
LINC00642-202ENST00000442515 CTSWP56202 376 aa18.07■□□□□ 0.48
LINC00642-202ENST00000442515 TTLL5Q6EMB2 1281 aa18.07■□□□□ 0.48
LINC00642-202ENST00000442515 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
LINC00642-202ENST00000442515 OTUD5Q96G74 571 aa18.07■□□□□ 0.48
LINC00642-202ENST00000442515 PHAXQ9H814 394 aaKnown RBP18.07■□□□□ 0.48
LINC00642-202ENST00000442515 KLRK1P26718 216 aa18.06■□□□□ 0.48
LINC00642-202ENST00000442515 SLC9C1Q4G0N8 1177 aa18.06■□□□□ 0.48
LINC00642-202ENST00000442515 PTPN18Q99952 460 aa18.06■□□□□ 0.48
LINC00642-202ENST00000442515 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
LINC00642-202ENST00000442515 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
LINC00642-202ENST00000442515 GREM2Q9H772 168 aa18.05■□□□□ 0.48
LINC00642-202ENST00000442515 PPP2R3BQ9Y5P8 575 aa18.05■□□□□ 0.48
LINC00642-202ENST00000442515 PTCH2Q9Y6C5 1203 aa18.05■□□□□ 0.48
LINC00642-202ENST00000442515 TESPA1A2RU30 521 aaPredicted RBP18.04■□□□□ 0.48
LINC00642-202ENST00000442515 UNCXA6NJT0 531 aa18.04■□□□□ 0.48
LINC00642-202ENST00000442515 GTF2IP78347 998 aa18.04■□□□□ 0.48
LINC00642-202ENST00000442515 DLGAP5Q15398 846 aa18.04■□□□□ 0.48
LINC00642-202ENST00000442515 SLC4A8Q2Y0W8 1093 aa18.04■□□□□ 0.48
LINC00642-202ENST00000442515 CHRDL2Q6WN34 429 aa18.04■□□□□ 0.48
LINC00642-202ENST00000442515 ZNF804BA4D1E1 1349 aa18.03■□□□□ 0.48
LINC00642-202ENST00000442515 IREB2P48200 963 aaKnown RBP18.03■□□□□ 0.48
LINC00642-202ENST00000442515 NBPF11Q86T75 865 aa18.03■□□□□ 0.48
LINC00642-202ENST00000442515 TTLL11Q8NHH1 800 aa18.03■□□□□ 0.48
LINC00642-202ENST00000442515 LEMD3Q9Y2U8 911 aa18.03■□□□□ 0.48
LINC00642-202ENST00000442515 PCDHAC2Q9Y5I4 1007 aa18.03■□□□□ 0.48
LINC00642-202ENST00000442515 CEP290O15078 2479 aa18.03■□□□□ 0.48
LINC00642-202ENST00000442515 CLRN2A0PK11 232 aa18.02■□□□□ 0.48
LINC00642-202ENST00000442515 MYCP01106 439 aaPredicted RBP18.02■□□□□ 0.48
LINC00642-202ENST00000442515 SUPT20HL1Q3ZLR7 823 aa18.02■□□□□ 0.48
LINC00642-202ENST00000442515 NBPF12Q5TAG4 269 aaPredicted RBP18.02■□□□□ 0.48
LINC00642-202ENST00000442515 MTMR14Q8NCE2 650 aa18.02■□□□□ 0.48
LINC00642-202ENST00000442515 METTL22Q9BUU2 404 aaPredicted RBP18.02■□□□□ 0.48
LINC00642-202ENST00000442515 ANKRD13AQ8IZ07 590 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms