RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 NLRP13Q86W25 1043 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 FAM200AQ8TCP9 573 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 PRIMPOLQ96LW4 560 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 FMNL2Q96PY5 1086 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 PPME1Q9Y570 386 aa6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 OAS3Q9Y6K5 1087 aaKnown RBP6.48□□□□□ -1.37
HMGB3P9-201ENST00000441799 LINC01387J3KSC0 135 aa6.47□□□□□ -1.37
HMGB3P9-201ENST00000441799 MCCP23508 829 aa6.47□□□□□ -1.37
HMGB3P9-201ENST00000441799 CDCA8Q53HL2 280 aa6.47□□□□□ -1.37
HMGB3P9-201ENST00000441799 RGS22Q8NE09 1264 aa6.47□□□□□ -1.37
HMGB3P9-201ENST00000441799 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■■■■■ 149.1
HMGB3P9-201ENST00000441799 STOML1Q9UBI4 398 aa6.47□□□□□ -1.37
HMGB3P9-201ENST00000441799 CC2D2AQ9P2K1 1620 aa6.47□□□□□ -1.37
HMGB3P9-201ENST00000441799 PTMSP20962 102 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 ATP11AP98196 1134 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 TXNDC11Q6PKC3 985 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 ZDHHC13Q8IUH4 622 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 CNPY4Q8N129 248 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 CACTIN-AS1Q8N1I8 211 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 OR13H1Q8NG92 308 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 MUC3BQ9H195 1237 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 RBSNQ9H1K0 784 aa6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 CWC22Q9HCG8 908 aaKnown RBP6.46□□□□□ -1.38
HMGB3P9-201ENST00000441799 A6NJR5 290 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 TNFRSF10BO14763 440 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 COBLO75128 1261 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 OCLNQ16625 522 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 CAPN12Q6ZSI9 719 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 KIAA1211Q6ZU35 1233 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 DCAF11Q8TEB1 546 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 PRDM16Q9HAZ2 1276 aa6.45□□□□□ -1.38
HMGB3P9-201ENST00000441799 GSC2O15499 205 aa6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 MAFGO15525 162 aa6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 PAX4O43316 350 aa6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 PTCD1O75127 700 aaKnown RBP6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 TAL1P17542 331 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 CD68P34810 354 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 GP2P55259 537 aaKnown RBP6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 FAM69CQ0P6D2 419 aa6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 FAM177A1Q8N128 213 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 FAM46AQ96IP4 442 aaKnown RBP6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 LACRTQ9GZZ8 138 aa6.44□□□□□ -1.38
HMGB3P9-201ENST00000441799 HMX2A2RU54 273 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 PRR19A6NJB7 356 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 UBAP1LF5GYI3 381 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 DHX15O43143 795 aaKnown RBP6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 NEFMP07197 916 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 SPINK2P20155 84 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 CDC27P30260 824 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 IRAK1P51617 712 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 CEP135Q66GS9 1140 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 ACAD11Q709F0 780 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 TRIM42Q8IWZ5 723 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 CARD10Q9BWT7 1032 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 RASSF4Q9H2L5 321 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 C7orf69Q9H7B7 122 aa6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 NOVA2Q9UNW9 492 aaKnown RBP6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 ARID4BQ4LE39 1312 aaPredicted RBP6.43□□□□□ -1.38
HMGB3P9-201ENST00000441799 FSCN2O14926 492 aa6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 DDX3YO15523 660 aaKnown RBP6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 PRMT3O60678 531 aa6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 CDC25BP30305 580 aa6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 TXKP42681 527 aa6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 NFIAQ12857 509 aa6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 HYAL2Q12891 473 aa6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 C16orf46Q6P387 395 aa6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 SECISBP2LQ93073 1101 aaKnown RBP6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 SH2B1Q9NRF2 756 aaPredicted RBP6.42□□□□□ -1.38
HMGB3P9-201ENST00000441799 ZBTB39O15060 712 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 ADAM11O75078 769 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 KIF4AO95239 1232 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 CYP2E1P05181 493 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 PTMAP06454 111 aaKnown RBP6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 RFX1P22670 979 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 SWI5Q1ZZU3 235 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 RNF43Q68DV7 783 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 FTSJ3Q8IY81 847 aaKnown RBP6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 FOXD4L4Q8WXT5 416 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 UTP4Q969X6 686 aaKnown RBP6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 KLHDC7BQ96G42 594 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 CEP41Q9BYV8 373 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 PRDM10Q9NQV6 1147 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 ZMIZ1Q9ULJ6 1067 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 CUX2O14529 1486 aa6.41□□□□□ -1.38
HMGB3P9-201ENST00000441799 SMNDC1O75940 238 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 EPHA1P21709 976 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 CCDC27Q2M243 656 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 UVSSAQ2YD98 709 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 DTX1Q86Y01 620 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 CEP120Q8N960 986 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 PIK3R5Q8WYR1 880 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 COL26A1Q96A83 441 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 MYRFLQ96LU7 910 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 POP1Q99575 1024 aaKnown RBP6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 PBX4Q9BYU1 374 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 C1orf115Q9H7X2 142 aa6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P9-201ENST00000441799 NAA30Q147X3 362 aaPredicted RBP6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 DUOXA2Q1HG44 320 aa6.39□□□□□ -1.39
HMGB3P9-201ENST00000441799 INTS5Q6P9B9 1019 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms