RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 WDHD1O75717 1129 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-210ENST00000441703 HCLS1P14317 486 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-210ENST00000441703 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
HDAC6-210ENST00000441703 SHISA4Q96DD7 197 aa8.34□□□□□ -1.07
HDAC6-210ENST00000441703 ZFYVE28Q9HCC9 887 aa8.34□□□□□ -1.07
HDAC6-210ENST00000441703 ZBTB47Q9UFB7 747 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-210ENST00000441703 POLLQ9UGP5 575 aa8.34□□□□□ -1.07
HDAC6-210ENST00000441703 TAF1P21675 1872 aa8.34□□□□□ -1.07
HDAC6-210ENST00000441703 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
HDAC6-210ENST00000441703 RPTORQ8N122 1335 aa8.33□□□□□ -1.08
HDAC6-210ENST00000441703 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-210ENST00000441703 FARP2O94887 1054 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-210ENST00000441703 ANP32AP39687 249 aaKnown RBP8.33□□□□□ -1.08
HDAC6-210ENST00000441703 PLA2G5P39877 138 aa8.33□□□□□ -1.08
HDAC6-210ENST00000441703 GPSM2P81274 684 aa8.33□□□□□ -1.08
HDAC6-210ENST00000441703 TAF1CQ15572 869 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-210ENST00000441703 NBPF9Q3BBW0 867 aa8.33□□□□□ -1.08
HDAC6-210ENST00000441703 APOBEC3FQ8IUX4 373 aaKnown RBP8.33□□□□□ -1.08
HDAC6-210ENST00000441703 OGFOD1Q8N543 542 aa8.33□□□□□ -1.08
HDAC6-210ENST00000441703 CCDC136Q96JN2 1154 aa8.33□□□□□ -1.08
HDAC6-210ENST00000441703 PSME4Q14997 1843 aa8.32□□□□□ -1.08
HDAC6-210ENST00000441703 GJA8P48165 433 aa8.32□□□□□ -1.08
HDAC6-210ENST00000441703 PRMT2P55345 433 aa8.32□□□□□ -1.08
HDAC6-210ENST00000441703 EIF4G2P78344 907 aaKnown RBP eCLIP8.32□□□□□ -1.08
HDAC6-210ENST00000441703 CAP1Q01518 475 aa8.32□□□□□ -1.08
HDAC6-210ENST00000441703 NBR1Q14596 966 aa8.32□□□□□ -1.08
HDAC6-210ENST00000441703 MTFR1Q15390 333 aa8.32□□□□□ -1.08
HDAC6-210ENST00000441703 TBC1D16Q8TBP0 767 aa8.32□□□□□ -1.08
HDAC6-210ENST00000441703 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
HDAC6-210ENST00000441703 SCN9AQ15858 1988 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 UFL1O94874 794 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 GJB1P08034 283 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 BMP8BP34820 402 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 LRIT3Q3SXY7 679 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 HSP90AB3PQ58FF7 597 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 FBXW7Q969H0 707 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 CLMNQ96JQ2 1002 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 BIN2Q9UBW5 565 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-210ENST00000441703 TRMT112Q9UI30 125 aaKnown RBP8.31□□□□□ -1.08
HDAC6-210ENST00000441703 FZD1Q9UP38 647 aa8.31□□□□□ -1.08
HDAC6-210ENST00000441703 ZNF646O15015 1829 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-210ENST00000441703 SH3TC1Q8TE82 1336 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 USP17L3A6NCW0 530 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 USP17L4A6NCW7 530 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 WNT10BO00744 389 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 ECM2O94769 699 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-210ENST00000441703 SASH1O94885 1247 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 GNRH1P01148 92 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 HSPA5P11021 654 aaKnown RBP8.3□□□□□ -1.08
HDAC6-210ENST00000441703 CCL5P13501 91 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 IREB2P48200 963 aaKnown RBP8.3□□□□□ -1.08
HDAC6-210ENST00000441703 BCAMP50895 628 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 UBXN2AP68543 259 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
HDAC6-210ENST00000441703 MCM10Q7L590 875 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 USP17L1Q7RTZ2 530 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 IL27Q8NEV9 243 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 RAET1EQ8TD07 263 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 CELF1Q92879 486 aaKnown RBP8.3□□□□□ -1.08
HDAC6-210ENST00000441703 PHACTR3Q96KR7 559 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 RSPH6AQ9H0K4 717 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 ANKIB1Q9P2G1 1089 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 RAPGEFL1Q9UHV5 662 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 GGA1Q9UJY5 639 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 DLG5Q8TDM6 1919 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 RANBP2P49792 3224 aaKnown RBP8.3□□□□□ -1.08
HDAC6-210ENST00000441703 LAMB1P07942 1786 aa8.3□□□□□ -1.08
HDAC6-210ENST00000441703 IRS2Q9Y4H2 1338 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 TESPA1A2RU30 521 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-210ENST00000441703 UNCXA6NJT0 531 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 HOXD10P28358 340 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 GRK4P32298 578 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 MAP3K11Q16584 847 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 UBE2Q1Q7Z7E8 422 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 TDHQ8IZJ6 230 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 TRIM47Q96LD4 638 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 GMLQ99445 158 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 PTPN18Q99952 460 aa8.29□□□□□ -1.08
HDAC6-210ENST00000441703 COL1A1P02452 1464 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-210ENST00000441703 TMEM265A0A087WTH1 108 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 HTATSF1O43719 755 aaKnown RBP8.28□□□□□ -1.08
HDAC6-210ENST00000441703 LACTBP83111 547 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-210ENST00000441703 TAF7Q15545 349 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-210ENST00000441703 SUPT20HL1Q3ZLR7 823 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 NLRP10Q86W26 655 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 ANKRD13AQ8IZ07 590 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 C7orf61Q8IZ16 206 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 U2AF1L4Q8WU68 220 aaKnown RBP8.28□□□□□ -1.08
HDAC6-210ENST00000441703 GDF15Q99988 308 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 ARHGAP39Q9C0H5 1083 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
HDAC6-210ENST00000441703 UNC80Q8N2C7 3258 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 MYO3BQ8WXR4 1341 aa8.28□□□□□ -1.08
HDAC6-210ENST00000441703 CCL15-CCL14A0A0B4J2E2 113 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 TFRCP02786 760 aaKnown RBP8.27□□□□□ -1.09
HDAC6-210ENST00000441703 GJA5P36382 358 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 MMP14P50281 582 aa8.27□□□□□ -1.09
HDAC6-210ENST00000441703 CCL15Q16663 113 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms