RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 PIM2Q9P1W9 311 aa25.77■■□□□ 1.72
VPS13B-204ENST00000441350 ATP2B4P23634 1241 aa25.76■■□□□ 1.71
VPS13B-204ENST00000441350 CCDC158Q5M9N0 1113 aa25.76■■□□□ 1.71
VPS13B-204ENST00000441350 KLHL34Q8N239 644 aa25.76■■□□□ 1.71
VPS13B-204ENST00000441350 TMX4Q9H1E5 349 aaPredicted RBP25.76■■□□□ 1.71
VPS13B-204ENST00000441350 GGA1Q9UJY5 639 aa25.76■■□□□ 1.71
VPS13B-204ENST00000441350 CC2D2BQ6DHV5 1058 aa25.75■■□□□ 1.71
VPS13B-204ENST00000441350 ZNF512BQ96KM6 892 aaPredicted RBP25.75■■□□□ 1.71
VPS13B-204ENST00000441350 CCDC102BQ68D86 513 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 C15orf52Q6ZUT6 534 aaKnown RBP25.74■■□□□ 1.71
VPS13B-204ENST00000441350 MPNDQ8N594 471 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 TBC1D16Q8TBP0 767 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 SNED1Q8TER0 1413 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.74■■□□□ 1.71
VPS13B-204ENST00000441350 POLLQ9UGP5 575 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 DUOX1Q9NRD9 1551 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 UFL1O94874 794 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 KLRK1P26718 216 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 PHKA1P46020 1223 aa25.74■■□□□ 1.71
VPS13B-204ENST00000441350 BCAMP50895 628 aa25.73■■□□□ 1.71
VPS13B-204ENST00000441350 TTC39AQ5SRH9 613 aa25.73■■□□□ 1.71
VPS13B-204ENST00000441350 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
VPS13B-204ENST00000441350 BOLA2Q9H3K6 86 aa25.73■■□□□ 1.71
VPS13B-204ENST00000441350 SDSP20132 328 aa25.72■■□□□ 1.71
VPS13B-204ENST00000441350 ARID4AP29374 1257 aaPredicted RBP25.72■■□□□ 1.71
VPS13B-204ENST00000441350 FBXO33Q7Z6M2 555 aa25.72■■□□□ 1.71
VPS13B-204ENST00000441350 HAUS7Q99871 368 aa25.72■■□□□ 1.71
VPS13B-204ENST00000441350 GYG1P46976 350 aa25.71■■□□□ 1.71
VPS13B-204ENST00000441350 DALRD3Q5D0E6 543 aaKnown RBP25.71■■□□□ 1.71
VPS13B-204ENST00000441350 DPP8Q6V1X1 898 aaPredicted RBP25.71■■□□□ 1.71
VPS13B-204ENST00000441350 TXNRD3Q86VQ6 643 aa25.71■■□□□ 1.71
VPS13B-204ENST00000441350 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
VPS13B-204ENST00000441350 NLGN2Q8NFZ4 835 aa25.71■■□□□ 1.71
VPS13B-204ENST00000441350 ZNF219Q9P2Y4 722 aaPredicted RBP25.71■■□□□ 1.71
VPS13B-204ENST00000441350 C21orf2O43822 256 aa25.7■■□□□ 1.71
VPS13B-204ENST00000441350 UQCRFS1P1P0C7P4 283 aa25.7■■□□□ 1.71
VPS13B-204ENST00000441350 GRIPAP1Q4V328 841 aa25.7■■□□□ 1.71
VPS13B-204ENST00000441350 CAVIN4Q5BKX8 364 aa25.7■■□□□ 1.71
VPS13B-204ENST00000441350 AKAP11Q9UKA4 1901 aa25.7■■□□□ 1.7
VPS13B-204ENST00000441350 SCARF1Q14162 830 aa25.7■■□□□ 1.7
VPS13B-204ENST00000441350 FHDC1Q9C0D6 1143 aaPredicted RBP25.7■■□□□ 1.7
VPS13B-204ENST00000441350 MED23Q9ULK4 1368 aa25.69■■□□□ 1.7
VPS13B-204ENST00000441350 C6orf229H3BNL8 230 aa25.69■■□□□ 1.7
VPS13B-204ENST00000441350 GPR101Q96P66 508 aaPredicted RBP25.69■■□□□ 1.7
VPS13B-204ENST00000441350 RTFDC1Q9BY42 306 aaPredicted RBP25.69■■□□□ 1.7
VPS13B-204ENST00000441350 ZBTB22O15209 634 aa25.68■■□□□ 1.7
VPS13B-204ENST00000441350 HIBADHP31937 336 aaKnown RBP25.68■■□□□ 1.7
VPS13B-204ENST00000441350 MCAMP43121 646 aa25.68■■□□□ 1.7
VPS13B-204ENST00000441350 TRIM6-TRIM34B2RNG4 842 aa25.67■■□□□ 1.7
VPS13B-204ENST00000441350 MAP4K4O95819 1239 aaPredicted RBP25.67■■□□□ 1.7
VPS13B-204ENST00000441350 CCDC93Q567U6 631 aa25.67■■□□□ 1.7
VPS13B-204ENST00000441350 SOGA3Q5TF21 947 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 GNL3LQ9NVN8 582 aaKnown RBP25.66■■□□□ 1.7
VPS13B-204ENST00000441350 RASGRF1Q13972 1273 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 VPS37DQ86XT2 251 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 RTKN2Q8IZC4 609 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 CNTROBQ8N137 903 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 EVI5LQ96CN4 794 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 NDUFB9Q9Y6M9 179 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 AK9Q5TCS8 1911 aa25.66■■□□□ 1.7
VPS13B-204ENST00000441350 RILPL2Q969X0 211 aa25.65■■□□□ 1.7
VPS13B-204ENST00000441350 DNAJC2Q99543 621 aaKnown RBP25.65■■□□□ 1.7
VPS13B-204ENST00000441350 HMG20BQ9P0W2 317 aa25.65■■□□□ 1.7
VPS13B-204ENST00000441350 PI16Q6UXB8 463 aa25.64■■□□□ 1.7
VPS13B-204ENST00000441350 ZNF804AQ7Z570 1209 aa25.64■■□□□ 1.7
VPS13B-204ENST00000441350 EDC3Q96F86 508 aaKnown RBP25.64■■□□□ 1.7
VPS13B-204ENST00000441350 SNRKQ9NRH2 765 aa25.64■■□□□ 1.7
VPS13B-204ENST00000441350 PAG1Q9NWQ8 432 aa25.64■■□□□ 1.7
VPS13B-204ENST00000441350 SEMA3EO15041 775 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 SPATA5Q8NB90 893 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 EYA3Q99504 573 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 SYT17Q9BSW7 474 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 WWC3Q9ULE0 1092 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 ZAP70P43403 619 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 FKBP4Q02790 459 aaKnown RBP eCLIP25.63■■□□□ 1.69
VPS13B-204ENST00000441350 WASHC4Q2M389 1173 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 C8orf34Q49A92 452 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 SUPT20HQ8NEM7 779 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 PSMD1Q99460 953 aa25.63■■□□□ 1.69
VPS13B-204ENST00000441350 ZC3H12CQ9C0D7 883 aaKnown RBP25.63■■□□□ 1.69
VPS13B-204ENST00000441350 ARFGEF1Q9Y6D6 1849 aa25.62■■□□□ 1.69
VPS13B-204ENST00000441350 GOLIM4O00461 696 aa25.62■■□□□ 1.69
VPS13B-204ENST00000441350 TDRD7Q8NHU6 1098 aaKnown RBP25.62■■□□□ 1.69
VPS13B-204ENST00000441350 IQSEC3Q9UPP2 1182 aaPredicted RBP25.62■■□□□ 1.69
VPS13B-204ENST00000441350 BCS1LQ9Y276 419 aa25.62■■□□□ 1.69
VPS13B-204ENST00000441350 CDC45O75419 566 aa25.61■■□□□ 1.69
VPS13B-204ENST00000441350 COL1A1P02452 1464 aaPredicted RBP25.61■■□□□ 1.69
VPS13B-204ENST00000441350 PDS5AQ29RF7 1337 aaKnown RBP25.61■■□□□ 1.69
VPS13B-204ENST00000441350 CD209Q9NNX6 404 aa25.61■■□□□ 1.69
VPS13B-204ENST00000441350 DENND2AQ9ULE3 1009 aa25.61■■□□□ 1.69
VPS13B-204ENST00000441350 FER1L6Q2WGJ9 1857 aa25.6■■□□□ 1.69
VPS13B-204ENST00000441350 RIMBP2O15034 1052 aa25.6■■□□□ 1.69
VPS13B-204ENST00000441350 CYP2E1P05181 493 aaPredicted RBP25.6■■□□□ 1.69
VPS13B-204ENST00000441350 IL1R1P14778 569 aa25.6■■□□□ 1.69
VPS13B-204ENST00000441350 ANTXR1Q9H6X2 564 aa25.6■■□□□ 1.69
VPS13B-204ENST00000441350 MYH13Q9UKX3 1938 aa25.6■■□□□ 1.69
VPS13B-204ENST00000441350 KBTBD3Q8NAB2 608 aa25.59■■□□□ 1.69
VPS13B-204ENST00000441350 COA1Q9GZY4 146 aa25.59■■□□□ 1.69
VPS13B-204ENST00000441350 TBC1D9Q6ZT07 1266 aa25.58■■□□□ 1.69
VPS13B-204ENST00000441350 KIAA2012Q0VF49 1180 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms