RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 ELF2Q15723 593 aa17.46■□□□□ 0.38
TOP3B-206ENST00000436282 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.38
TOP3B-206ENST00000436282 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.38
TOP3B-206ENST00000436282 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.46■□□□□ 0.38
TOP3B-206ENST00000436282 V9GYY5 206 aaPredicted RBP17.46■□□□□ 0.38
TOP3B-206ENST00000436282 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-206ENST00000436282 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 CEP57L1Q8IYX8 460 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
TOP3B-206ENST00000436282 SCRN1Q12765 414 aa17.45■□□□□ 0.38
TOP3B-206ENST00000436282 COL15A1P39059 1388 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 FAM160A1Q05DH4 1040 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 ATL3Q6DD88 541 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 ENGASEQ8NFI3 743 aa17.44■□□□□ 0.38
TOP3B-206ENST00000436282 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 EDC3Q96F86 508 aaKnown RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 OSBPL5Q9H0X9 879 aaPredicted RBP17.44■□□□□ 0.38
TOP3B-206ENST00000436282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■□□ 16
TOP3B-206ENST00000436282 NAT10Q9H0A0 1025 aaKnown RBP17.43■□□□□ 0.38
TOP3B-206ENST00000436282 IMPACTQ9P2X3 320 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 RFX7Q2KHR2 1363 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 PFKFB2O60825 505 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 FAM193AP78312 1265 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 AOPEPQ8N6M6 819 aa17.43■□□□□ 0.38
TOP3B-206ENST00000436282 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
TOP3B-206ENST00000436282 CCDC66A2RUB6 948 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
TOP3B-206ENST00000436282 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
TOP3B-206ENST00000436282 A0A087WZG4 1122 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 USP28Q96RU2 1077 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 NDUFB9Q9Y6M9 179 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 L2HGDHQ9H9P8 463 aa17.42■□□□□ 0.38
TOP3B-206ENST00000436282 CYP21A2P08686 494 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 ATP5JP18859 108 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 NBPF11Q86T75 865 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 DNAJC5Q9H3Z4 198 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 PRDM11Q9NQV5 511 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 A0A087WWV3 80 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.41■□□□□ 0.38
TOP3B-206ENST00000436282 TOM1L2Q6ZVM7 507 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 CREBRFQ8IUR6 639 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 LAMA4Q16363 1823 aa17.41■□□□□ 0.38
TOP3B-206ENST00000436282 ZNF609O15014 1411 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 FGD1P98174 961 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 LRP10Q7Z4F1 713 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 CAMTA1Q9Y6Y1 1673 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 PTPDC1A2A3K4 754 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 TFCP2Q12800 502 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 CCDC150Q8NCX0 1101 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 TNS3Q68CZ2 1445 aa17.4■□□□□ 0.38
TOP3B-206ENST00000436282 CTDNEP1O95476 244 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 H2AFXP16104 143 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 E4F1Q66K89 784 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 LRRC2Q9BYS8 371 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 PSDA5PKW4 1024 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 KCNJ6P48051 423 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 ME1P48163 572 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 FOSBP53539 338 aa17.39■□□□□ 0.37
TOP3B-206ENST00000436282 SIPA1L3O60292 1781 aaPredicted RBP17.39■□□□□ 0.37
TOP3B-206ENST00000436282 CCDC129Q6ZRS4 1044 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 PPP1R13BQ96KQ4 1090 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 ABCC6O95255 1503 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 TUBB4AP04350 444 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 PTPN12Q05209 780 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DHX8Q14562 1220 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 BMS1Q14692 1282 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 MCMDC2Q4G0Z9 681 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 MRPS27Q92552 414 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DNAJC2Q99543 621 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DBNLQ9UJU6 430 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 DHX32Q7L7V1 743 aaKnown RBP17.38■□□□□ 0.37
TOP3B-206ENST00000436282 BPIFA3Q9BQP9 254 aa17.38■□□□□ 0.37
TOP3B-206ENST00000436282 C5P01031 1676 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 SALL1Q9NSC2 1324 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 LMBR1LQ6UX01 489 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 TTLL7Q6ZT98 887 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
TOP3B-206ENST00000436282 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
TOP3B-206ENST00000436282 A1BGP04217 495 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 CHGBP05060 677 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ERCC6LQ2NKX8 1250 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 TNNI3KQ59H18 835 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ZCRB1Q8TBF4 217 aaKnown RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ERCC4Q92889 916 aaPredicted RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 ZNF330Q9Y3S2 320 aaPredicted RBP17.36■□□□□ 0.37
TOP3B-206ENST00000436282 FPGT-TNNI3KV9GXZ4 949 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 NBPF26B4DH59 902 aa17.36■□□□□ 0.37
TOP3B-206ENST00000436282 RFX5P48382 616 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms