RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 ATP11AP98196 1134 aa8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 GDF6Q6KF10 455 aaPredicted RBP8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 TMEM102Q8N9M5 508 aaPredicted RBP8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 DZANK1Q9NVP4 752 aa8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 PPP4R2Q9NY27 417 aa8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 CCDC9Q9Y3X0 531 aaKnown RBP8.21□□□□□ -1.1
GTF3C3-204ENST00000435252 POLR3DP05423 398 aaPredicted RBP8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 RAC1P63000 192 aa8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 SNRPNP63162 240 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 PRRT3Q5FWE3 981 aa8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 TRAPPC3LQ5T215 181 aa8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 FAM117BQ6P1L5 589 aa8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 ZKSCAN3Q9BRR0 538 aa8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 EHD4Q9H223 541 aa8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 SRA1Q9HD15 236 aaKnown RBP8.2□□□□□ -1.1
GTF3C3-204ENST00000435252 LDHBP07195 334 aaKnown RBP8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 NID1P14543 1247 aa8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 KIAA0319Q5VV43 1072 aa8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 NPAS4Q8IUM7 802 aa8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 SPG7Q9UQ90 795 aa8.19□□□□□ -1.1
GTF3C3-204ENST00000435252 EIF4EBP3O60516 100 aaPredicted RBP8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 PRPF40AO75400 957 aaKnown RBP8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 CDC27P30260 824 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 LINC00114Q6XXX2 140 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 C8orf86Q6ZUL3 223 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 DTWD1Q8N5C7 304 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 FRMD6Q96NE9 622 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 PLVAPQ9BX97 442 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 SRCIN1Q9C0H9 1055 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 BHLHE41Q9C0J9 482 aaPredicted RBP8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 LACRTQ9GZZ8 138 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 TRIM33Q9UPN9 1127 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 CNTNAP5Q8WYK1 1306 aa8.18□□□□□ -1.1
GTF3C3-204ENST00000435252 A0A1W2PP55 124 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 GIPC1O14908 333 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 TRIM28Q13263 835 aaKnown RBP8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 PEAR1Q5VY43 1037 aaPredicted RBP8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 IL22RA1Q8N6P7 574 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 ASAP3Q8TDY4 903 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 BSNDQ8WZ55 320 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 SUV39H2Q9H5I1 410 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 ZFYVE1Q9HBF4 777 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 LATS2Q9NRM7 1088 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
GTF3C3-204ENST00000435252 ACPPP15309 386 aa8.16□□□□□ -1.1
GTF3C3-204ENST00000435252 GRIK5Q16478 980 aa8.16□□□□□ -1.1
GTF3C3-204ENST00000435252 NXPE3Q969Y0 559 aa8.16□□□□□ -1.1
GTF3C3-204ENST00000435252 TRIM11Q96F44 468 aa8.16□□□□□ -1.1
GTF3C3-204ENST00000435252 POP1Q99575 1024 aaKnown RBP8.16□□□□□ -1.1
GTF3C3-204ENST00000435252 SPATA31C1P0DKV0 1188 aa8.15□□□□□ -1.1
GTF3C3-204ENST00000435252 ZNF326Q5BKZ1 582 aaKnown RBP8.15□□□□□ -1.1
GTF3C3-204ENST00000435252 CCNJLQ8IV13 435 aa8.15□□□□□ -1.1
GTF3C3-204ENST00000435252 DMRTC2Q8IXT2 367 aaPredicted RBP8.15□□□□□ -1.1
GTF3C3-204ENST00000435252 NACC1Q96RE7 527 aa8.15□□□□□ -1.1
GTF3C3-204ENST00000435252 ADAM19Q9H013 955 aa8.15□□□□□ -1.1
GTF3C3-204ENST00000435252 H3BRJ5 948 aa8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 NFKBIEO00221 500 aa8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 XRCC5P13010 732 aaKnown RBP8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 ARL4DP49703 201 aa8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 PRPF40BQ6NWY9 871 aaKnown RBP8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 EPS8L3Q8TE67 593 aaKnown RBP8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
GTF3C3-204ENST00000435252 A0A0A0MRY4 1105 aa8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 IRS1P35568 1242 aa8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 XPCQ01831 940 aaPredicted RBP8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 PTPN12Q05209 780 aaKnown RBP8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 COL9A3Q14050 684 aaPredicted RBP8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 DDX54Q8TDD1 881 aaKnown RBP8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 WNT8BQ93098 351 aa8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.13□□□□□ -1.11
GTF3C3-204ENST00000435252 A0A096LPE4 126 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 A0A1W2PPZ6 126 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 TRPA1O75762 1119 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 ELNP15502 786 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 GNA15P30679 374 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 GSK3AP49840 483 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 PIP4K2BP78356 416 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 RASSF7Q02833 373 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 GRM2Q14416 872 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 TMEM151AQ8N4L1 468 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 BCO2Q9BYV7 579 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 SOX13Q9UN79 622 aa8.12□□□□□ -1.11
GTF3C3-204ENST00000435252 APBA3O96018 575 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 GSTT1P30711 240 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 DTHD1Q6ZMT9 781 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 FBXO33Q7Z6M2 555 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 FMR1NBQ8N0W7 255 aaPredicted RBP8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 HHIPQ96QV1 700 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 TCF12Q99081 682 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 CLEC4MQ9H2X3 399 aaPredicted RBP8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 MRS2Q9HD23 443 aa8.11□□□□□ -1.11
GTF3C3-204ENST00000435252 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms