RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 ETFBKMTQ8IXQ9 262 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 SAMD3Q8N6K7 520 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 SLC10A4Q96EP9 437 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 CCDC113Q9H0I3 377 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 ST7Q9NRC1 585 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 CD2APQ9Y5K6 639 aa6.87□□□□□ -1.31
HMGB3P10-201ENST00000434734 CCER2I3L3R5 266 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 ZIC2O95409 532 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 FOSP01100 380 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 BMP1P13497 986 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 ATF3P18847 181 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 CD53P19397 219 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 FSHRP23945 695 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 IFRD2Q12894 506 aaPredicted RBP6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 BRD3Q15059 726 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 MRPL14Q6P1L8 145 aaKnown RBP6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 ENAMQ9NRM1 1142 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 SERTAD1Q9UHV2 236 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 STRIP2Q9ULQ0 834 aa6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 R3HCC1Q9Y3T6 440 aaKnown RBP6.86□□□□□ -1.31
HMGB3P10-201ENST00000434734 EXOC5O00471 708 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 NRDCO43847 1150 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 MYL1P05976 194 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 ZEB1P37275 1124 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 EPHB1P54762 984 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 MCL1Q07820 350 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 VPS72Q15906 364 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 C2orf27AQ580R0 203 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 CCDC116Q8IYX3 515 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 FAM169BQ8N8A8 192 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 ITPKCQ96DU7 683 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 TRIM56Q9BRZ2 755 aaKnown RBP6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 GGNBP2Q9H3C7 697 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 FAM8A1Q9UBU6 413 aa6.85□□□□□ -1.31
HMGB3P10-201ENST00000434734 CFAP69A5D8W1 941 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 MINDY4BA8MYZ0 360 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 PDPK1O15530 556 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 ASMTLO95671 621 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 CDC27P30260 824 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 ZAP70P43403 619 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 DHX9Q08211 1270 aaKnown RBP6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 CCDC81Q6ZN84 652 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 PODNQ7Z5L7 613 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 THNSL2Q86YJ6 484 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 CPLX3Q8WVH0 158 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 MYO19Q96H55 970 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 KCTD15Q96SI1 283 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 DNAJC25Q9H1X3 360 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 PGPEP1Q9NXJ5 209 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 SWAP70Q9UH65 585 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 NRBP1Q9UHY1 535 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 INTUQ9ULD6 942 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 PTCH2Q9Y6C5 1203 aa6.84□□□□□ -1.31
HMGB3P10-201ENST00000434734 WASHC2CQ9Y4E1 1318 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 ZNF500O60304 480 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 DIAPH1O60610 1272 aaKnown RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 CPNE3O75131 537 aaKnown RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 UPP2O95045 317 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 GDF10P55107 478 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 RAB15P59190 212 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 POU5F1BQ06416 359 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 RASGRF1Q13972 1273 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 SEPT6Q14141 434 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 ZRSR2Q15696 482 aaKnown RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 DDR2Q16832 855 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 NPAS3Q8IXF0 933 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 MEIOBQ8N635 442 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 UBR7Q8N806 425 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 TRIM52Q96A61 297 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 CCDC74AQ96AQ1 378 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 SHDQ96IW2 340 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 ZFP42Q96MM3 310 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 NAP1L4Q99733 375 aaKnown RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 ZFAND3Q9H8U3 227 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 MAPK8IP1Q9UQF2 711 aa6.83□□□□□ -1.32
HMGB3P10-201ENST00000434734 WFS1O76024 890 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 TRIM37O94972 964 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 MYCP01106 439 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 EIF4A3P38919 411 aaKnown RBP6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 RAB27AP51159 221 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 FOXK2Q01167 660 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 KSR2Q6VAB6 950 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 PCGF5Q86SE9 256 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 MYO1HQ8N1T3 1032 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 TTC8Q8TAM2 541 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 ZNF296Q8WUU4 475 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 RBSNQ9H1K0 784 aa6.82□□□□□ -1.32
HMGB3P10-201ENST00000434734 TERTO14746 1132 aaKnown RBP6.81□□□□□ -1.32
HMGB3P10-201ENST00000434734 GIPC1O14908 333 aa6.81□□□□□ -1.32
HMGB3P10-201ENST00000434734 STAT3P40763 770 aa6.81□□□□□ -1.32
HMGB3P10-201ENST00000434734 TCEA2Q15560 299 aa6.81□□□□□ -1.32
HMGB3P10-201ENST00000434734 C8orf34Q49A92 452 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms