RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 MICAL2O94851 1124 aa10.47□□□□□ -0.73
PTPRK-211ENST00000429595 ARSDP51689 593 aa10.47□□□□□ -0.73
PTPRK-211ENST00000429595 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
PTPRK-211ENST00000429595 MYO19Q96H55 970 aa10.47□□□□□ -0.73
PTPRK-211ENST00000429595 PERM1Q5SV97 790 aa10.46□□□□□ -0.73
PTPRK-211ENST00000429595 TRPM4Q8TD43 1214 aa10.46□□□□□ -0.73
PTPRK-211ENST00000429595 LRFN2Q9ULH4 789 aa10.46□□□□□ -0.73
PTPRK-211ENST00000429595 USP20Q9Y2K6 914 aa10.46□□□□□ -0.73
PTPRK-211ENST00000429595 C3P01024 1663 aa10.46□□□□□ -0.74
PTPRK-211ENST00000429595 OPLAHO14841 1288 aa10.45□□□□□ -0.74
PTPRK-211ENST00000429595 SASH3O75995 380 aa10.45□□□□□ -0.74
PTPRK-211ENST00000429595 MLLT1Q03111 559 aaPredicted RBP10.45□□□□□ -0.74
PTPRK-211ENST00000429595 EFCAB2Q5VUJ9 269 aa10.45□□□□□ -0.74
PTPRK-211ENST00000429595 MSL1Q68DK7 614 aa10.45□□□□□ -0.74
PTPRK-211ENST00000429595 SSBP4Q9BWG4 385 aaPredicted RBP10.45□□□□□ -0.74
PTPRK-211ENST00000429595 FRRS1LQ9P0K9 344 aa10.45□□□□□ -0.74
PTPRK-211ENST00000429595 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
PTPRK-211ENST00000429595 H2AFB2P0C5Z0 115 aa10.44□□□□□ -0.74
PTPRK-211ENST00000429595 GPLD1P80108 840 aa10.44□□□□□ -0.74
PTPRK-211ENST00000429595 NRG1Q02297 640 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-211ENST00000429595 C11orf91Q3C1V1 193 aa10.44□□□□□ -0.74
PTPRK-211ENST00000429595 CPS1P31327 1500 aa10.43□□□□□ -0.74
PTPRK-211ENST00000429595 CNTLNQ9NXG0 1405 aa10.43□□□□□ -0.74
PTPRK-211ENST00000429595 RARAP10276 462 aa10.43□□□□□ -0.74
PTPRK-211ENST00000429595 CTTNBP2Q8WZ74 1663 aa10.43□□□□□ -0.74
PTPRK-211ENST00000429595 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
PTPRK-211ENST00000429595 PCSK7Q16549 785 aa10.42□□□□□ -0.74
PTPRK-211ENST00000429595 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
PTPRK-211ENST00000429595 C11orf16Q9NQ32 467 aa10.42□□□□□ -0.74
PTPRK-211ENST00000429595 FKBP5Q13451 457 aaPredicted RBP10.41□□□□□ -0.74
PTPRK-211ENST00000429595 FAM200AQ8TCP9 573 aa10.41□□□□□ -0.74
PTPRK-211ENST00000429595 USP21Q9UK80 565 aa10.41□□□□□ -0.74
PTPRK-211ENST00000429595 RTCBQ9Y3I0 505 aaKnown RBP10.41□□□□□ -0.74
PTPRK-211ENST00000429595 PLA2R1Q13018 1463 aa10.41□□□□□ -0.74
PTPRK-211ENST00000429595 NPATQ14207 1427 aa10.41□□□□□ -0.74
PTPRK-211ENST00000429595 ELMSAN1Q6PJG2 1045 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 HFE2Q6ZVN8 426 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 FBXO11Q86XK2 927 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 DTWD1Q8N5C7 304 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 TP53INP1Q96A56 240 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 VTI1AQ96AJ9 217 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 SHANK2Q9UPX8 1470 aa10.4□□□□□ -0.74
PTPRK-211ENST00000429595 RAPGEF6Q8TEU7 1601 aa10.4□□□□□ -0.75
PTPRK-211ENST00000429595 EGFRP00533 1210 aa10.39□□□□□ -0.75
PTPRK-211ENST00000429595 COX20Q5RI15 118 aa10.39□□□□□ -0.75
PTPRK-211ENST00000429595 TTC9Q92623 222 aa10.39□□□□□ -0.75
PTPRK-211ENST00000429595 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-211ENST00000429595 ZMYM3Q14202 1370 aa10.39□□□□□ -0.75
PTPRK-211ENST00000429595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
PTPRK-211ENST00000429595 DEAF1O75398 565 aaPredicted RBP10.38□□□□□ -0.75
PTPRK-211ENST00000429595 NRLP54845 237 aa10.38□□□□□ -0.75
PTPRK-211ENST00000429595 ARTNQ5T4W7 220 aa10.38□□□□□ -0.75
PTPRK-211ENST00000429595 TREML1Q86YW5 311 aa10.38□□□□□ -0.75
PTPRK-211ENST00000429595 WFDC8Q8IUA0 241 aa10.38□□□□□ -0.75
PTPRK-211ENST00000429595 RGL4Q8IZJ4 473 aa10.38□□□□□ -0.75
PTPRK-211ENST00000429595 PSMG3-AS1Q96PY0 264 aa10.38□□□□□ -0.75
PTPRK-211ENST00000429595 SMG9Q9H0W8 520 aaKnown RBP10.38□□□□□ -0.75
PTPRK-211ENST00000429595 TLR7Q9NYK1 1049 aaKnown RBP10.38□□□□□ -0.75
PTPRK-211ENST00000429595 NOVA2Q9UNW9 492 aaKnown RBP10.38□□□□□ -0.75
PTPRK-211ENST00000429595 KCNMB2Q9Y691 235 aa10.38□□□□□ -0.75
PTPRK-211ENST00000429595 PLCH2O75038 1416 aa10.37□□□□□ -0.75
PTPRK-211ENST00000429595 SUPT6HQ7KZ85 1726 aaKnown RBP10.37□□□□□ -0.75
PTPRK-211ENST00000429595 WFDC12Q8WWY7 111 aa10.37□□□□□ -0.75
PTPRK-211ENST00000429595 PRIMPOLQ96LW4 560 aa10.37□□□□□ -0.75
PTPRK-211ENST00000429595 TCOF1Q13428 1488 aaKnown RBP10.36□□□□□ -0.75
PTPRK-211ENST00000429595 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
PTPRK-211ENST00000429595 XYLBO75191 536 aa10.36□□□□□ -0.75
PTPRK-211ENST00000429595 NOS3P29474 1203 aa10.36□□□□□ -0.75
PTPRK-211ENST00000429595 ZFP64Q9NPA5 681 aa10.36□□□□□ -0.75
PTPRK-211ENST00000429595 ZMIZ1Q9ULJ6 1067 aa10.36□□□□□ -0.75
PTPRK-211ENST00000429595 AGLP35573 1532 aa10.36□□□□□ -0.75
PTPRK-211ENST00000429595 EIF2AK2P19525 551 aaKnown RBP10.35□□□□□ -0.75
PTPRK-211ENST00000429595 RFX1P22670 979 aa10.35□□□□□ -0.75
PTPRK-211ENST00000429595 IREB2P48200 963 aaKnown RBP10.35□□□□□ -0.75
PTPRK-211ENST00000429595 OCLNQ16625 522 aa10.35□□□□□ -0.75
PTPRK-211ENST00000429595 FAM26DQ5JW98 314 aa10.35□□□□□ -0.75
PTPRK-211ENST00000429595 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
PTPRK-211ENST00000429595 SAP130Q9H0E3 1048 aa10.35□□□□□ -0.75
PTPRK-211ENST00000429595 J3QW42 95 aa10.34□□□□□ -0.75
PTPRK-211ENST00000429595 MMP20O60882 483 aa10.34□□□□□ -0.75
PTPRK-211ENST00000429595 ANKLE2Q86XL3 938 aa10.34□□□□□ -0.75
PTPRK-211ENST00000429595 ETFBKMTQ8IXQ9 262 aa10.34□□□□□ -0.75
PTPRK-211ENST00000429595 PRMT3O60678 531 aa10.33□□□□□ -0.76
PTPRK-211ENST00000429595 RANGAP1P46060 587 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-211ENST00000429595 TRIP4Q15650 581 aaPredicted RBP10.33□□□□□ -0.76
PTPRK-211ENST00000429595 PLD4Q96BZ4 506 aa10.33□□□□□ -0.76
PTPRK-211ENST00000429595 MEGF10Q96KG7 1140 aa10.33□□□□□ -0.76
PTPRK-211ENST00000429595 NUP153P49790 1475 aaKnown RBP10.33□□□□□ -0.76
PTPRK-211ENST00000429595 DLL1O00548 723 aa10.32□□□□□ -0.76
PTPRK-211ENST00000429595 SWI5Q1ZZU3 235 aa10.32□□□□□ -0.76
PTPRK-211ENST00000429595 IGF2-ASQ6U949 168 aa10.32□□□□□ -0.76
PTPRK-211ENST00000429595 NSUN5Q96P11 429 aaKnown RBP10.32□□□□□ -0.76
PTPRK-211ENST00000429595 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.32□□□□□ -0.76
PTPRK-211ENST00000429595 ACIN1Q9UKV3 1341 aaKnown RBP10.32□□□□□ -0.76
PTPRK-211ENST00000429595 REREQ9P2R6 1566 aa10.31□□□□□ -0.76
PTPRK-211ENST00000429595 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
PTPRK-211ENST00000429595 SETD1AO15047 1707 aaKnown RBP10.31□□□□□ -0.76
PTPRK-211ENST00000429595 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
PTPRK-211ENST00000429595 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms