RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 PARP10Q53GL7 1025 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 SNX14Q9Y5W7 946 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 TRPM3Q9HCF6 1732 aaPredicted RBP13.05□□□□□ -0.32
HIPK2-203ENST00000428878 CCDC171Q6TFL3 1326 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 RGS12O14924 1447 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 NCAPD2Q15021 1401 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 NEK1Q96PY6 1258 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 SAP30BPQ9UHR5 308 aaKnown RBP13.05□□□□□ -0.32
HIPK2-203ENST00000428878 PARP3Q9Y6F1 533 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 RNF113AO15541 343 aaKnown RBP13.05□□□□□ -0.32
HIPK2-203ENST00000428878 EIF5P55010 431 aaKnown RBP13.05□□□□□ -0.32
HIPK2-203ENST00000428878 PUM3Q15397 648 aaKnown RBP13.05□□□□□ -0.32
HIPK2-203ENST00000428878 Q6ZUG5 572 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 C3orf67Q6ZVT6 689 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 AATFQ9NY61 560 aaKnown RBP eCLIP13.05□□□□□ -0.324e-6■■■■□ 20.9
HIPK2-203ENST00000428878 COL22A1Q8NFW1 1626 aaPredicted RBP13.04□□□□□ -0.32
HIPK2-203ENST00000428878 KIF1AQ12756 1690 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 COL15A1P39059 1388 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 PDE8BO95263 885 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 SERPINB2P05120 415 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 ZNF532Q9HCE3 1301 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 GPAA1O43292 621 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 PTMAP06454 111 aaKnown RBP13.04□□□□□ -0.32
HIPK2-203ENST00000428878 AKAP17AQ02040 695 aaKnown RBP13.04□□□□□ -0.32
HIPK2-203ENST00000428878 CTDSPL2Q05D32 466 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 NKX1-1Q15270 411 aaPredicted RBP13.04□□□□□ -0.32
HIPK2-203ENST00000428878 ISCA1Q9BUE6 129 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 A0A0G2JLW4 131 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 MMP10P09238 476 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 BICD2Q8TD16 824 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 NACAP1Q9BZK3 213 aa13.04□□□□□ -0.32
HIPK2-203ENST00000428878 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
HIPK2-203ENST00000428878 ROBO1Q9Y6N7 1651 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 ZBTB7AO95365 584 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 NAA16Q6N069 864 aaPredicted RBP13.03□□□□□ -0.32
HIPK2-203ENST00000428878 KBTBD3Q8NAB2 608 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 TRIM34Q9BYJ4 488 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 GPHNQ9NQX3 736 aaPredicted RBP13.03□□□□□ -0.32
HIPK2-203ENST00000428878 TAF6LQ9Y6J9 622 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 hCG_1642624A0A1W2PR95 340 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 PRKAB2O43741 272 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
HIPK2-203ENST00000428878 MCM4P33991 863 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 GSE1Q14687 1217 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 NFIXQ14938 502 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 CMTR1Q8N1G2 835 aaKnown RBP13.03□□□□□ -0.32
HIPK2-203ENST00000428878 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
HIPK2-203ENST00000428878 B4E1Z4 1266 aa13.02□□□□□ -0.32
HIPK2-203ENST00000428878 MPHOSPH10O00566 681 aaKnown RBP13.02□□□□□ -0.32
HIPK2-203ENST00000428878 GJB2P29033 226 aa13.02□□□□□ -0.32
HIPK2-203ENST00000428878 ATG9AQ7Z3C6 839 aa13.02□□□□□ -0.32
HIPK2-203ENST00000428878 ABCA3Q99758 1704 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 IFIT3O14879 490 aaKnown RBP13.02□□□□□ -0.33
HIPK2-203ENST00000428878 SLC27A2O14975 620 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
HIPK2-203ENST00000428878 SPATA5Q8NB90 893 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 PUS7LQ9H0K6 701 aaKnown RBP13.02□□□□□ -0.33
HIPK2-203ENST00000428878 LIMCH1Q9UPQ0 1083 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 CYP2D7A0A087X1C5 515 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
HIPK2-203ENST00000428878 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 ZC3H12CQ9C0D7 883 aaKnown RBP13.02□□□□□ -0.33
HIPK2-203ENST00000428878 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
HIPK2-203ENST00000428878 LTN1O94822 1766 aa13.02□□□□□ -0.33
HIPK2-203ENST00000428878 ATP5JP18859 108 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 SCNN1DP51172 638 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 NUCB2P80303 420 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 LPIN2Q92539 896 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.01□□□□□ -0.33
HIPK2-203ENST00000428878 RPS6KA4O75676 772 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 HIBADHP31937 336 aaKnown RBP13.01□□□□□ -0.33
HIPK2-203ENST00000428878 MCAMP43121 646 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 AMOTL1Q8IY63 956 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 OSBP2Q969R2 916 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 AHDC1Q5TGY3 1603 aaPredicted RBP13.01□□□□□ -0.33
HIPK2-203ENST00000428878 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
HIPK2-203ENST00000428878 VAT1LQ9HCJ6 419 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 RGPD2P0DJD1 1756 aa13.01□□□□□ -0.33
HIPK2-203ENST00000428878 KLRK1P26718 216 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 STX8Q9UNK0 236 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 KLF18A0A0U1RQI7 1052 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 CCDC69A6NI79 296 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 GTF2IP78347 998 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
HIPK2-203ENST00000428878 M0R2C6 588 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
HIPK2-203ENST00000428878 DYNLL1P63167 89 aaKnown RBP13□□□□□ -0.33
HIPK2-203ENST00000428878 RASGRF1Q13972 1273 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 DIXDC1Q155Q3 683 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 ZNF772Q68DY9 489 aaPredicted RBP13□□□□□ -0.33
HIPK2-203ENST00000428878 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
HIPK2-203ENST00000428878 RASSF8Q8NHQ8 419 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms