RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PSDA5PKW4 1024 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-204ENST00000424143 YEATS4O95619 227 aa17.79■□□□□ 0.44
C9orf3-204ENST00000424143 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
C9orf3-204ENST00000424143 SKILP12757 684 aa17.79■□□□□ 0.44
C9orf3-204ENST00000424143 STOX1Q6ZVD7 989 aa17.79■□□□□ 0.44
C9orf3-204ENST00000424143 COPS6Q7L5N1 327 aa17.79■□□□□ 0.44
C9orf3-204ENST00000424143 FMR1NBQ8N0W7 255 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-204ENST00000424143 MYD88Q99836 296 aa17.79■□□□□ 0.44
C9orf3-204ENST00000424143 GOLPH3LQ9H4A5 285 aa17.79■□□□□ 0.44
C9orf3-204ENST00000424143 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
C9orf3-204ENST00000424143 ARFGEF2Q9Y6D5 1785 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 WDR19Q8NEZ3 1342 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 KIF1AQ12756 1690 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 CCDC69A6NI79 296 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 FAM177BA6PVY3 158 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 MYO1BO43795 1136 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 LRRFIP1Q32MZ4 808 aaKnown RBP17.78■□□□□ 0.44
C9orf3-204ENST00000424143 KIF18AQ8NI77 898 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 MRPS27Q92552 414 aaKnown RBP17.78■□□□□ 0.44
C9orf3-204ENST00000424143 USP28Q96RU2 1077 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
C9orf3-204ENST00000424143 KDM6AO15550 1401 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-204ENST00000424143 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
C9orf3-204ENST00000424143 KCNG4Q8TDN1 519 aa17.77■□□□□ 0.44
C9orf3-204ENST00000424143 L2HGDHQ9H9P8 463 aa17.77■□□□□ 0.44
C9orf3-204ENST00000424143 PRDM10Q9NQV6 1147 aa17.77■□□□□ 0.44
C9orf3-204ENST00000424143 ZBTB7CA1YPR0 619 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 PDIA3P30101 505 aaKnown RBP17.76■□□□□ 0.43
C9orf3-204ENST00000424143 BRAPQ7Z569 592 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 FSIP1Q8NA03 581 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 PLBD2Q8NHP8 589 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 POLR3EQ9NVU0 708 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 ZNF142P52746 1687 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-204ENST00000424143 H7C1W4 665 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 CCP110O43303 1012 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 FGD1P98174 961 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 EDC3Q96F86 508 aaKnown RBP17.76■□□□□ 0.43
C9orf3-204ENST00000424143 DDX11Q96FC9 970 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 TIGD1Q96MW7 591 aa17.76■□□□□ 0.43
C9orf3-204ENST00000424143 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 ERBB3P21860 1342 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 E7EWF7 191 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 NRDCO43847 1150 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
C9orf3-204ENST00000424143 DTNBO60941 627 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 CIAO1O76071 339 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 SLU7O95391 586 aaKnown RBP17.75■□□□□ 0.43
C9orf3-204ENST00000424143 IL15P40933 162 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-204ENST00000424143 TPM4P67936 248 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 ANKLE2Q86XL3 938 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 PAG1Q9NWQ8 432 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 KIAA1468Q9P260 1216 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
C9orf3-204ENST00000424143 IKBKBO14920 756 aa17.74■□□□□ 0.43
C9orf3-204ENST00000424143 RNF113AO15541 343 aaKnown RBP17.74■□□□□ 0.43
C9orf3-204ENST00000424143 PHKG2P15735 406 aa17.74■□□□□ 0.43
C9orf3-204ENST00000424143 ILDR1Q86SU0 546 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-204ENST00000424143 LINC00301Q8NCQ3 95 aa17.74■□□□□ 0.43
C9orf3-204ENST00000424143 PCDHA7Q9UN72 937 aa17.74■□□□□ 0.43
C9orf3-204ENST00000424143 DDX60Q8IY21 1712 aaKnown RBP17.73■□□□□ 0.43
C9orf3-204ENST00000424143 PARP4Q9UKK3 1724 aaKnown RBP17.73■□□□□ 0.43
C9orf3-204ENST00000424143 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
C9orf3-204ENST00000424143 ARID3AQ99856 593 aa17.73■□□□□ 0.43
C9orf3-204ENST00000424143 SPDYE4A6NLX3 237 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 ZFYP08048 801 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-204ENST00000424143 HSPD1P10809 573 aaKnown RBP17.72■□□□□ 0.43
C9orf3-204ENST00000424143 ME1P48163 572 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 NLRP12P59046 1061 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 FOXO4P98177 505 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 APOBRQ0VD83 1088 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 NBPF11Q86T75 865 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 IFNL2Q8IZJ0 200 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 KRT222Q8N1A0 295 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 RAPGEF4Q8WZA2 1011 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 DCAF5Q96JK2 942 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 SEC62Q99442 399 aaKnown RBP17.72■□□□□ 0.43
C9orf3-204ENST00000424143 DNAJC2Q99543 621 aaKnown RBP17.72■□□□□ 0.43
C9orf3-204ENST00000424143 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 FAM237AA0A1B0GTK4 181 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 TATP17735 454 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-204ENST00000424143 ATG9AQ7Z3C6 839 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 ELOA2Q8IYF1 753 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-204ENST00000424143 USP16Q9Y5T5 823 aa17.72■□□□□ 0.43
C9orf3-204ENST00000424143 A0A087WZG4 1122 aa17.71■□□□□ 0.43
C9orf3-204ENST00000424143 FDPSP14324 419 aaKnown RBP17.71■□□□□ 0.43
C9orf3-204ENST00000424143 CMA1P23946 247 aa17.71■□□□□ 0.43
C9orf3-204ENST00000424143 CCDC93Q567U6 631 aa17.71■□□□□ 0.43
C9orf3-204ENST00000424143 UBE3BQ7Z3V4 1068 aa17.71■□□□□ 0.43
C9orf3-204ENST00000424143 AOPEPQ8N6M6 819 aa17.71■□□□□ 0.43
C9orf3-204ENST00000424143 ZNF496Q96IT1 587 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-204ENST00000424143 ZNF215Q9UL58 517 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-204ENST00000424143 ALS2Q96Q42 1657 aa17.71■□□□□ 0.43
C9orf3-204ENST00000424143 GLI3P10071 1580 aa17.7■□□□□ 0.42
C9orf3-204ENST00000424143 DDX46Q7L014 1031 aaKnown RBP17.7■□□□□ 0.42
C9orf3-204ENST00000424143 FCHSD1Q86WN1 690 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms