RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 SSH3Q8TE77 659 aa23.1■■□□□ 1.29
DDR1-233ENST00000421124 NMRK2Q9NPI5 230 aa23.1■■□□□ 1.29
DDR1-233ENST00000421124 GJA3Q9Y6H8 435 aa23.1■■□□□ 1.29
DDR1-233ENST00000421124 IRS2Q9Y4H2 1338 aa23.09■■□□□ 1.29
DDR1-233ENST00000421124 RAD17O75943 681 aa23.09■■□□□ 1.29
DDR1-233ENST00000421124 COA1Q9GZY4 146 aa23.09■■□□□ 1.29
DDR1-233ENST00000421124 TNIP1Q15025 636 aa23.08■■□□□ 1.29
DDR1-233ENST00000421124 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
DDR1-233ENST00000421124 L3MBTL3Q96JM7 780 aaPredicted RBP23.08■■□□□ 1.29
DDR1-233ENST00000421124 RRAGCQ9HB90 399 aa23.08■■□□□ 1.29
DDR1-233ENST00000421124 CEP126Q9P2H0 1117 aa23.07■■□□□ 1.28
DDR1-233ENST00000421124 ZNF646O15015 1829 aaPredicted RBP23.06■■□□□ 1.28
DDR1-233ENST00000421124 VEGFAP15692 232 aaPredicted RBP23.06■■□□□ 1.28
DDR1-233ENST00000421124 PUM3Q15397 648 aaKnown RBP23.06■■□□□ 1.28
DDR1-233ENST00000421124 ZNF804AQ7Z570 1209 aa23.06■■□□□ 1.28
DDR1-233ENST00000421124 G3BP1Q13283 466 aaKnown RBP eCLIP23.05■■□□□ 1.28
DDR1-233ENST00000421124 RPAP2Q8IXW5 612 aaPredicted RBP23.05■■□□□ 1.28
DDR1-233ENST00000421124 KCNQ5Q9NR82 932 aa23.05■■□□□ 1.28
DDR1-233ENST00000421124 ARAP2Q8WZ64 1704 aa23.05■■□□□ 1.28
DDR1-233ENST00000421124 POTECB2RU33 542 aa23.04■■□□□ 1.28
DDR1-233ENST00000421124 PSMD14O00487 310 aa23.04■■□□□ 1.28
DDR1-233ENST00000421124 KIF3CO14782 793 aa23.04■■□□□ 1.28
DDR1-233ENST00000421124 FGFR2P21802 821 aa23.04■■□□□ 1.28
DDR1-233ENST00000421124 SUPT16HQ9Y5B9 1047 aaKnown RBP23.04■■□□□ 1.28
DDR1-233ENST00000421124 IQCA1LA6NCM1 817 aa23.03■■□□□ 1.28
DDR1-233ENST00000421124 IFIT1P09914 478 aaKnown RBP23.03■■□□□ 1.28
DDR1-233ENST00000421124 SLC5A1P13866 664 aa23.03■■□□□ 1.28
DDR1-233ENST00000421124 LPIN2Q92539 896 aa23.03■■□□□ 1.28
DDR1-233ENST00000421124 CD209Q9NNX6 404 aa23.03■■□□□ 1.28
DDR1-233ENST00000421124 MYH13Q9UKX3 1938 aa23.02■■□□□ 1.28
DDR1-233ENST00000421124 SURF6O75683 361 aaKnown RBP23.02■■□□□ 1.28
DDR1-233ENST00000421124 ATP2B3Q16720 1220 aa23.02■■□□□ 1.28
DDR1-233ENST00000421124 CRBNQ96SW2 442 aa23.02■■□□□ 1.28
DDR1-233ENST00000421124 USP17L3A6NCW0 530 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 USP17L4A6NCW7 530 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 HMMRO75330 724 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 VIL1P09327 827 aaKnown RBP23.01■■□□□ 1.27
DDR1-233ENST00000421124 IL1R1P14778 569 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
DDR1-233ENST00000421124 HIBADHP31937 336 aaKnown RBP23.01■■□□□ 1.27
DDR1-233ENST00000421124 GYG1P46976 350 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 GMPSP49915 693 aaPredicted RBP23.01■■□□□ 1.27
DDR1-233ENST00000421124 SCNN1DP51172 638 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 TFCP2Q12800 502 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 CAVIN4Q5BKX8 364 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 USP17L1Q7RTZ2 530 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 FAM84BQ96KN1 310 aaPredicted RBP23.01■■□□□ 1.27
DDR1-233ENST00000421124 HACL1Q9UJ83 578 aa23.01■■□□□ 1.27
DDR1-233ENST00000421124 NOP58Q9Y2X3 529 aaKnown RBP23.01■■□□□ 1.27
DDR1-233ENST00000421124 OS9Q13438 667 aaPredicted RBP23■■□□□ 1.27
DDR1-233ENST00000421124 SIRT2Q8IXJ6 389 aa23■■□□□ 1.27
DDR1-233ENST00000421124 C16orf71Q8IYS4 520 aaPredicted RBP23■■□□□ 1.27
DDR1-233ENST00000421124 ZBTB12Q9Y330 459 aaPredicted RBP23■■□□□ 1.27
DDR1-233ENST00000421124 RPS12P25398 132 aaKnown RBP22.99■■□□□ 1.27
DDR1-233ENST00000421124 FBXO33Q7Z6M2 555 aa22.99■■□□□ 1.27
DDR1-233ENST00000421124 VPS37DQ86XT2 251 aa22.99■■□□□ 1.27
DDR1-233ENST00000421124 FBXW7Q969H0 707 aa22.99■■□□□ 1.27
DDR1-233ENST00000421124 GPRC5DQ9NZD1 345 aa22.99■■□□□ 1.27
DDR1-233ENST00000421124 AKAP2Q9Y2D5 859 aa22.99■■□□□ 1.27
DDR1-233ENST00000421124 ZNF609O15014 1411 aa22.99■■□□□ 1.27
DDR1-233ENST00000421124 SASH1O94885 1247 aa22.98■■□□□ 1.27
DDR1-233ENST00000421124 EPHX2P34913 555 aa22.98■■□□□ 1.27
DDR1-233ENST00000421124 STRIP1Q5VSL9 837 aa22.98■■□□□ 1.27
DDR1-233ENST00000421124 TTLL5Q6EMB2 1281 aa22.98■■□□□ 1.27
DDR1-233ENST00000421124 RSBN1LQ6PCB5 846 aaPredicted RBP22.98■■□□□ 1.27
DDR1-233ENST00000421124 DPF2Q92785 391 aa22.98■■□□□ 1.27
DDR1-233ENST00000421124 TAF1DQ9H5J8 278 aaPredicted RBP22.98■■□□□ 1.27
DDR1-233ENST00000421124 EPS15P42566 896 aa22.97■■□□□ 1.27
DDR1-233ENST00000421124 GTF2IP78347 998 aa22.97■■□□□ 1.27
DDR1-233ENST00000421124 DACT2Q5SW24 774 aa22.97■■□□□ 1.27
DDR1-233ENST00000421124 TDRD7Q8NHU6 1098 aaKnown RBP22.97■■□□□ 1.27
DDR1-233ENST00000421124 A0A1B0GUL7 405 aa22.96■■□□□ 1.27
DDR1-233ENST00000421124 BCAMP50895 628 aa22.96■■□□□ 1.27
DDR1-233ENST00000421124 HSP90AB4PQ58FF6 505 aa22.96■■□□□ 1.27
DDR1-233ENST00000421124 AGBL3Q8NEM8 1001 aa22.96■■□□□ 1.27
DDR1-233ENST00000421124 EXOC6BQ9Y2D4 811 aa22.96■■□□□ 1.27
DDR1-233ENST00000421124 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.96■■□□□ 1.27
DDR1-233ENST00000421124 TIMM10P62072 90 aa22.95■■□□□ 1.26
DDR1-233ENST00000421124 ERC1Q8IUD2 1116 aa22.95■■□□□ 1.26
DDR1-233ENST00000421124 MYO3BQ8WXR4 1341 aa22.95■■□□□ 1.26
DDR1-233ENST00000421124 CNOT7Q9UIV1 285 aaKnown RBP22.95■■□□□ 1.26
DDR1-233ENST00000421124 TOMM70O94826 608 aa22.94■■□□□ 1.26
DDR1-233ENST00000421124 C1QTNF8P60827 252 aa22.94■■□□□ 1.26
DDR1-233ENST00000421124 MICALL2Q8IY33 904 aa22.94■■□□□ 1.26
DDR1-233ENST00000421124 GMLQ99445 158 aa22.94■■□□□ 1.26
DDR1-233ENST00000421124 GPR108Q9NPR9 543 aa22.94■■□□□ 1.26
DDR1-233ENST00000421124 ADARB2Q9NS39 739 aaKnown RBP22.94■■□□□ 1.26
DDR1-233ENST00000421124 ADAMTSL1Q8N6G6 1762 aa22.94■■□□□ 1.26
DDR1-233ENST00000421124 FAM205AQ6ZU69 1335 aa22.93■■□□□ 1.26
DDR1-233ENST00000421124 H7C1D1 291 aa22.93■■□□□ 1.26
DDR1-233ENST00000421124 FRAT2O75474 233 aaPredicted RBP22.93■■□□□ 1.26
DDR1-233ENST00000421124 ADORA1P30542 326 aa22.93■■□□□ 1.26
DDR1-233ENST00000421124 EAPPQ56P03 285 aaPredicted RBP22.93■■□□□ 1.26
DDR1-233ENST00000421124 PNMA8AQ86V59 439 aaPredicted RBP22.93■■□□□ 1.26
DDR1-233ENST00000421124 NEUROD6Q96NK8 337 aa22.93■■□□□ 1.26
DDR1-233ENST00000421124 MXD3Q9BW11 206 aa22.93■■□□□ 1.26
DDR1-233ENST00000421124 IQSEC3Q9UPP2 1182 aaPredicted RBP22.93■■□□□ 1.26
DDR1-233ENST00000421124 AAMPQ13685 434 aa22.92■■□□□ 1.26
DDR1-233ENST00000421124 RBM46Q8TBY0 533 aaKnown RBP22.92■■□□□ 1.26
DDR1-233ENST00000421124 XAGE2Q96GT9 111 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms