RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 LPIN2Q92539 896 aa15.78■□□□□ 0.12
ATG4B-208ENST00000419606 XAGE2Q96GT9 111 aa15.78■□□□□ 0.12
ATG4B-208ENST00000419606 TMX4Q9H1E5 349 aaPredicted RBP15.78■□□□□ 0.12
ATG4B-208ENST00000419606 DBNLQ9UJU6 430 aaKnown RBP15.78■□□□□ 0.12
ATG4B-208ENST00000419606 AKAP2Q9Y2D5 859 aa15.78■□□□□ 0.12
ATG4B-208ENST00000419606 LEMD3Q9Y2U8 911 aa15.78■□□□□ 0.12
ATG4B-208ENST00000419606 SALL3Q9BXA9 1300 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 NFKBIEO00221 500 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 RIMBP2O15034 1052 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 SLC5A1P13866 664 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 GYG1P46976 350 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 RASSF7Q02833 373 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 TSHZ3Q63HK5 1081 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 CC2D2BQ6DHV5 1058 aa15.77■□□□□ 0.12
ATG4B-208ENST00000419606 IFIT2P09913 472 aaKnown RBP15.76■□□□□ 0.11
ATG4B-208ENST00000419606 BCAMP50895 628 aa15.76■□□□□ 0.11
ATG4B-208ENST00000419606 PRELPP51888 382 aa15.76■□□□□ 0.11
ATG4B-208ENST00000419606 RTFDC1Q9BY42 306 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-208ENST00000419606 ZBTB47Q9UFB7 747 aaPredicted RBP15.76■□□□□ 0.11
ATG4B-208ENST00000419606 IFIT1P09914 478 aaKnown RBP15.75■□□□□ 0.11
ATG4B-208ENST00000419606 PHKA1P46020 1223 aa15.75■□□□□ 0.11
ATG4B-208ENST00000419606 FKBP4Q02790 459 aaKnown RBP eCLIP15.75■□□□□ 0.11
ATG4B-208ENST00000419606 PLEKHM2Q8IWE5 1019 aa15.75■□□□□ 0.11
ATG4B-208ENST00000419606 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
ATG4B-208ENST00000419606 FAM84BQ96KN1 310 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-208ENST00000419606 ZNF277Q9NRM2 450 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-208ENST00000419606 COL4A5P29400 1685 aa15.75■□□□□ 0.11
ATG4B-208ENST00000419606 GOLGB1Q14789 3259 aaKnown RBP15.75■□□□□ 0.11
ATG4B-208ENST00000419606 AOC3Q16853 763 aa15.74■□□□□ 0.11
ATG4B-208ENST00000419606 SOGA3Q5TF21 947 aa15.74■□□□□ 0.11
ATG4B-208ENST00000419606 ARHGAP27Q6ZUM4 889 aa15.74■□□□□ 0.11
ATG4B-208ENST00000419606 PSMD1Q99460 953 aa15.74■□□□□ 0.11
ATG4B-208ENST00000419606 IQSEC3Q9UPP2 1182 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-208ENST00000419606 MED23Q9ULK4 1368 aa15.74■□□□□ 0.11
ATG4B-208ENST00000419606 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
ATG4B-208ENST00000419606 RGS3P49796 1198 aa15.73■□□□□ 0.11
ATG4B-208ENST00000419606 SCARF1Q14162 830 aa15.73■□□□□ 0.11
ATG4B-208ENST00000419606 GPR162Q16538 588 aa15.73■□□□□ 0.11
ATG4B-208ENST00000419606 DOK7Q18PE1 504 aa15.73■□□□□ 0.11
ATG4B-208ENST00000419606 WASHC4Q2M389 1173 aa15.73■□□□□ 0.11
ATG4B-208ENST00000419606 CCDC102BQ68D86 513 aa15.73■□□□□ 0.11
ATG4B-208ENST00000419606 C15orf52Q6ZUT6 534 aaKnown RBP15.73■□□□□ 0.11
ATG4B-208ENST00000419606 FBXO33Q7Z6M2 555 aa15.73■□□□□ 0.11
ATG4B-208ENST00000419606 CHD4Q14839 1912 aa15.72■□□□□ 0.11
ATG4B-208ENST00000419606 MX1P20591 662 aa15.72■□□□□ 0.11
ATG4B-208ENST00000419606 PDE1AP54750 535 aa15.72■□□□□ 0.11
ATG4B-208ENST00000419606 GORABQ5T7V8 394 aa15.72■□□□□ 0.11
ATG4B-208ENST00000419606 ZC3H12CQ9C0D7 883 aaKnown RBP15.72■□□□□ 0.11
ATG4B-208ENST00000419606 TAOK3Q9H2K8 898 aa15.72■□□□□ 0.11
ATG4B-208ENST00000419606 NDUFB9Q9Y6M9 179 aa15.72■□□□□ 0.11
ATG4B-208ENST00000419606 PPIP5K2O43314 1243 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 HIBADHP31937 336 aaKnown RBP15.71■□□□□ 0.11
ATG4B-208ENST00000419606 GRIPAP1Q4V328 841 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 TTC39AQ5SRH9 613 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 PI16Q6UXB8 463 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 SUPT20HQ8NEM7 779 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 PI4K2BQ8TCG2 481 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 EYA3Q99504 573 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 DBNDD1Q9H9R9 158 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 STAP2Q9UGK3 403 aa15.71■□□□□ 0.11
ATG4B-208ENST00000419606 AKAP11Q9UKA4 1901 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 SBF1O95248 1867 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 IARSP41252 1262 aaKnown RBP15.7■□□□□ 0.1
ATG4B-208ENST00000419606 KIAA2012Q0VF49 1180 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 CAVIN4Q5BKX8 364 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 BOLA2Q9H3K6 86 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 KCNQ5Q9NR82 932 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 SNRKQ9NRH2 765 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 ECHDC1Q9NTX5 307 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
ATG4B-208ENST00000419606 COL1A1P02452 1464 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-208ENST00000419606 LTBP3Q9NS15 1303 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 MYH13Q9UKX3 1938 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 MAP4K4O95819 1239 aaPredicted RBP15.69■□□□□ 0.1
ATG4B-208ENST00000419606 MCAMP43121 646 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 RASGRF1Q13972 1273 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 CCDC158Q5M9N0 1113 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 ZNF804AQ7Z570 1209 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 VPS37DQ86XT2 251 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 LARGE2Q8N3Y3 721 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 EDC3Q96F86 508 aaKnown RBP15.69■□□□□ 0.1
ATG4B-208ENST00000419606 CD209Q9NNX6 404 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 SCN9AQ15858 1988 aa15.69■□□□□ 0.1
ATG4B-208ENST00000419606 ATP5JP18859 108 aa15.68■□□□□ 0.1
ATG4B-208ENST00000419606 ARID4AP29374 1257 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-208ENST00000419606 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
ATG4B-208ENST00000419606 OSBPL3Q9H4L5 887 aa15.68■□□□□ 0.1
ATG4B-208ENST00000419606 HMG20BQ9P0W2 317 aa15.68■□□□□ 0.1
ATG4B-208ENST00000419606 ZNF646O15015 1829 aaPredicted RBP15.68■□□□□ 0.1
ATG4B-208ENST00000419606 TTC41PQ6P2S7 1318 aa15.68■□□□□ 0.1
ATG4B-208ENST00000419606 YDJCA8MPS7 323 aa15.67■□□□□ 0.1
ATG4B-208ENST00000419606 ECE2O60344 883 aa15.67■□□□□ 0.1
ATG4B-208ENST00000419606 IL1R1P14778 569 aa15.67■□□□□ 0.1
ATG4B-208ENST00000419606 ZAP70P43403 619 aa15.67■□□□□ 0.1
ATG4B-208ENST00000419606 COA1Q9GZY4 146 aa15.67■□□□□ 0.1
ATG4B-208ENST00000419606 MYO5AQ9Y4I1 1855 aaKnown RBP15.67■□□□□ 0.1
ATG4B-208ENST00000419606 G3V3G9 751 aa15.66■□□□□ 0.1
ATG4B-208ENST00000419606 UQCRFS1P1P0C7P4 283 aa15.66■□□□□ 0.1
ATG4B-208ENST00000419606 GSPT1P15170 499 aaKnown RBP15.66■□□□□ 0.1
ATG4B-208ENST00000419606 CHAF1AQ13111 956 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 231.8 ms