RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 ZKSCAN2Q63HK3 967 aa13.24□□□□□ -0.29
RFC1-203ENST00000418436 LMBR1LQ6UX01 489 aa13.24□□□□□ -0.29
RFC1-203ENST00000418436 DPP8Q6V1X1 898 aaPredicted RBP13.24□□□□□ -0.29
RFC1-203ENST00000418436 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
RFC1-203ENST00000418436 FRAT1Q92837 279 aaPredicted RBP13.24□□□□□ -0.29
RFC1-203ENST00000418436 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
RFC1-203ENST00000418436 PODXL2Q9NZ53 605 aa13.24□□□□□ -0.29
RFC1-203ENST00000418436 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
RFC1-203ENST00000418436 GPSM2P81274 684 aa13.23□□□□□ -0.29
RFC1-203ENST00000418436 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
RFC1-203ENST00000418436 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
RFC1-203ENST00000418436 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
RFC1-203ENST00000418436 GLTPD2A6NH11 291 aa13.22□□□□□ -0.29
RFC1-203ENST00000418436 IFIT5Q13325 482 aaKnown RBP13.22□□□□□ -0.29
RFC1-203ENST00000418436 ANKRD44Q8N8A2 993 aa13.22□□□□□ -0.29
RFC1-203ENST00000418436 BICC1Q9H694 974 aaKnown RBP13.22□□□□□ -0.29
RFC1-203ENST00000418436 POLLQ9UGP5 575 aa13.22□□□□□ -0.29
RFC1-203ENST00000418436 MINPP1Q9UNW1 487 aa13.22□□□□□ -0.29
RFC1-203ENST00000418436 FZD9O00144 591 aa13.21□□□□□ -0.29
RFC1-203ENST00000418436 IGHMBP2P38935 993 aaKnown RBP13.21□□□□□ -0.29
RFC1-203ENST00000418436 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
RFC1-203ENST00000418436 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
RFC1-203ENST00000418436 TBC1D16Q8TBP0 767 aa13.21□□□□□ -0.29
RFC1-203ENST00000418436 GPBP1L1Q9HC44 474 aaPredicted RBP13.21□□□□□ -0.29
RFC1-203ENST00000418436 WDR90Q96KV7 1748 aa13.21□□□□□ -0.3
RFC1-203ENST00000418436 XDHP47989 1333 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 KDM2BQ8NHM5 1336 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 UBTFL1P0CB47 393 aaPredicted RBP13.2□□□□□ -0.3
RFC1-203ENST00000418436 AOC3Q16853 763 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 CCDC57Q2TAC2 916 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 LARGE2Q8N3Y3 721 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 ZNF526Q8TF50 670 aaPredicted RBP13.2□□□□□ -0.3
RFC1-203ENST00000418436 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 MPHOSPH8Q99549 860 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 MEIS3Q99687 375 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 RCAN3Q9UKA8 241 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 CHMP3Q9Y3E7 222 aa13.2□□□□□ -0.3
RFC1-203ENST00000418436 WASHC4Q2M389 1173 aa13.19□□□□□ -0.3
RFC1-203ENST00000418436 DZIP1LQ8IYY4 767 aaKnown RBP13.19□□□□□ -0.3
RFC1-203ENST00000418436 ZNF594Q96JF6 807 aaPredicted RBP13.19□□□□□ -0.3
RFC1-203ENST00000418436 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
RFC1-203ENST00000418436 GGA1Q9UJY5 639 aa13.19□□□□□ -0.3
RFC1-203ENST00000418436 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
RFC1-203ENST00000418436 C6orf229H3BNL8 230 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 GNAI3P08754 354 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 RLBP1P12271 317 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 ATP2B4P23634 1241 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 NIM1KQ8IY84 436 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 YTHDC1Q96MU7 727 aaKnown RBP13.18□□□□□ -0.3
RFC1-203ENST00000418436 EYA3Q99504 573 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 ANKRD2Q9GZV1 360 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 SCN4AP35499 1836 aa13.18□□□□□ -0.3
RFC1-203ENST00000418436 ZNF541Q9H0D2 1346 aa13.17□□□□□ -0.3
RFC1-203ENST00000418436 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
RFC1-203ENST00000418436 POTECB2RU33 542 aa13.17□□□□□ -0.3
RFC1-203ENST00000418436 KIF3CO14782 793 aa13.17□□□□□ -0.3
RFC1-203ENST00000418436 DDNO94850 711 aaPredicted RBP13.17□□□□□ -0.3
RFC1-203ENST00000418436 UFL1O94874 794 aa13.17□□□□□ -0.3
RFC1-203ENST00000418436 RFX5P48382 616 aaPredicted RBP13.17□□□□□ -0.3
RFC1-203ENST00000418436 CHRNDQ07001 517 aa13.17□□□□□ -0.3
RFC1-203ENST00000418436 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
RFC1-203ENST00000418436 LEMD3Q9Y2U8 911 aa13.17□□□□□ -0.3
RFC1-203ENST00000418436 LRRFIP2Q9Y608 721 aaKnown RBP13.17□□□□□ -0.3
RFC1-203ENST00000418436 PSME4Q14997 1843 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 MS4A1P11836 297 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
RFC1-203ENST00000418436 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
RFC1-203ENST00000418436 GPC2Q8N158 579 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
RFC1-203ENST00000418436 ZC3H12CQ9C0D7 883 aaKnown RBP13.16□□□□□ -0.3
RFC1-203ENST00000418436 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 RIPOR2Q9Y4F9 1068 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
RFC1-203ENST00000418436 SCN9AQ15858 1988 aa13.15□□□□□ -0.3
RFC1-203ENST00000418436 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
RFC1-203ENST00000418436 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.3
RFC1-203ENST00000418436 CXCL9Q07325 125 aa13.15□□□□□ -0.3
RFC1-203ENST00000418436 MTX1Q13505 466 aa13.15□□□□□ -0.3
RFC1-203ENST00000418436 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
RFC1-203ENST00000418436 CNNM1Q9NRU3 951 aa13.15□□□□□ -0.3
RFC1-203ENST00000418436 ZNF804BA4D1E1 1349 aa13.14□□□□□ -0.31
RFC1-203ENST00000418436 IRS2Q9Y4H2 1338 aa13.14□□□□□ -0.31
RFC1-203ENST00000418436 GNAI2P04899 355 aa13.14□□□□□ -0.31
RFC1-203ENST00000418436 HOXB3P14651 431 aaPredicted RBP13.14□□□□□ -0.31
RFC1-203ENST00000418436 VEGFAP15692 232 aaPredicted RBP13.14□□□□□ -0.31
RFC1-203ENST00000418436 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
RFC1-203ENST00000418436 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
RFC1-203ENST00000418436 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 ZNF646O15015 1829 aaPredicted RBP13.13□□□□□ -0.31
RFC1-203ENST00000418436 ECE2O60344 883 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 TAF5LO75529 589 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 PPP1R37O75864 691 aa13.13□□□□□ -0.31
RFC1-203ENST00000418436 DOK7Q18PE1 504 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms