RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.78■□□□□ 0.92
CPNE1-208ENST00000414711 PTCH2Q9Y6C5 1203 aa20.78■□□□□ 0.92
CPNE1-208ENST00000414711 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
CPNE1-208ENST00000414711 SASH1O94885 1247 aa20.77■□□□□ 0.92
CPNE1-208ENST00000414711 MYCP01106 439 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-208ENST00000414711 OTUD7BQ6GQQ9 843 aa20.77■□□□□ 0.92
CPNE1-208ENST00000414711 APOBEC3FQ8IUX4 373 aaKnown RBP20.77■□□□□ 0.92
CPNE1-208ENST00000414711 OGFOD1Q8N543 542 aa20.77■□□□□ 0.92
CPNE1-208ENST00000414711 FAM89AQ96GI7 184 aa20.77■□□□□ 0.92
CPNE1-208ENST00000414711 FZD1Q9UP38 647 aa20.77■□□□□ 0.92
CPNE1-208ENST00000414711 PRO3102Q9H379 93 aa20.76■□□□□ 0.91
CPNE1-208ENST00000414711 PODNQ7Z5L7 613 aa20.75■□□□□ 0.91
CPNE1-208ENST00000414711 DPF3Q92784 378 aa20.75■□□□□ 0.91
CPNE1-208ENST00000414711 CLMNQ96JQ2 1002 aa20.75■□□□□ 0.91
CPNE1-208ENST00000414711 COL1A1P02452 1464 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-208ENST00000414711 MAP3K11Q16584 847 aa20.73■□□□□ 0.91
CPNE1-208ENST00000414711 MXD3Q9BW11 206 aa20.73■□□□□ 0.91
CPNE1-208ENST00000414711 SSC5DA1L4H1 1573 aa20.72■□□□□ 0.91
CPNE1-208ENST00000414711 ARHGEF6Q15052 776 aa20.72■□□□□ 0.91
CPNE1-208ENST00000414711 RTL5Q5HYW3 569 aaPredicted RBP20.72■□□□□ 0.91
CPNE1-208ENST00000414711 TSPYL4Q9UJ04 414 aa20.72■□□□□ 0.91
CPNE1-208ENST00000414711 LAMA3Q16787 3333 aa20.71■□□□□ 0.91
CPNE1-208ENST00000414711 ZNF646O15015 1829 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-208ENST00000414711 IRS4O14654 1257 aaPredicted RBP20.71■□□□□ 0.91
CPNE1-208ENST00000414711 NEFMP07197 916 aa20.71■□□□□ 0.91
CPNE1-208ENST00000414711 DACT2Q5SW24 774 aa20.71■□□□□ 0.91
CPNE1-208ENST00000414711 SEC31BQ9NQW1 1179 aa20.71■□□□□ 0.91
CPNE1-208ENST00000414711 XDHP47989 1333 aa20.71■□□□□ 0.91
CPNE1-208ENST00000414711 MYO3BQ8WXR4 1341 aa20.71■□□□□ 0.91
CPNE1-208ENST00000414711 WTIPA6NIX2 430 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-208ENST00000414711 SOX1O00570 391 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-208ENST00000414711 SH3TC2Q8TF17 1288 aa20.7■□□□□ 0.9
CPNE1-208ENST00000414711 SHISA4Q96DD7 197 aa20.7■□□□□ 0.9
CPNE1-208ENST00000414711 PTPN18Q99952 460 aa20.7■□□□□ 0.9
CPNE1-208ENST00000414711 ISCA1Q9BUE6 129 aa20.7■□□□□ 0.9
CPNE1-208ENST00000414711 PPP1R12BO60237 982 aaPredicted RBP20.69■□□□□ 0.9
CPNE1-208ENST00000414711 GJA5P36382 358 aa20.69■□□□□ 0.9
CPNE1-208ENST00000414711 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
CPNE1-208ENST00000414711 A0A1W2PPC1 479 aa20.68■□□□□ 0.9
CPNE1-208ENST00000414711 ATP5J2-PTCD1G3V325 749 aa20.68■□□□□ 0.9
CPNE1-208ENST00000414711 LRCH3Q96II8 777 aa20.68■□□□□ 0.9
CPNE1-208ENST00000414711 DEFB129Q9H1M3 183 aa20.68■□□□□ 0.9
CPNE1-208ENST00000414711 TESPA1A2RU30 521 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-208ENST00000414711 UNCXA6NJT0 531 aa20.67■□□□□ 0.9
CPNE1-208ENST00000414711 ATP2B4P23634 1241 aa20.67■□□□□ 0.9
CPNE1-208ENST00000414711 PLBD2Q8NHP8 589 aa20.67■□□□□ 0.9
CPNE1-208ENST00000414711 MED23Q9ULK4 1368 aa20.67■□□□□ 0.9
CPNE1-208ENST00000414711 MMP14P50281 582 aa20.66■□□□□ 0.9
CPNE1-208ENST00000414711 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
CPNE1-208ENST00000414711 STRIP1Q5VSL9 837 aa20.66■□□□□ 0.9
CPNE1-208ENST00000414711 HTATIP2Q9BUP3 242 aa20.66■□□□□ 0.9
CPNE1-208ENST00000414711 ZBED3Q96IU2 234 aaPredicted RBP20.65■□□□□ 0.9
CPNE1-208ENST00000414711 NR2E3Q9Y5X4 410 aa20.65■□□□□ 0.9
CPNE1-208ENST00000414711 PPP2R3BQ9Y5P8 575 aa20.64■□□□□ 0.89
CPNE1-208ENST00000414711 CLSPNQ9HAW4 1339 aa20.63■□□□□ 0.89
CPNE1-208ENST00000414711 ZBTB7BO15156 539 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-208ENST00000414711 PPP2R1AP30153 589 aa20.63■□□□□ 0.89
CPNE1-208ENST00000414711 IREB2P48200 963 aaKnown RBP20.63■□□□□ 0.89
CPNE1-208ENST00000414711 TAF1CQ15572 869 aaPredicted RBP20.63■□□□□ 0.89
CPNE1-208ENST00000414711 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
CPNE1-208ENST00000414711 KIAA0825Q8IV33 1275 aa20.63■□□□□ 0.89
CPNE1-208ENST00000414711 ZFYVE28Q9HCC9 887 aa20.63■□□□□ 0.89
CPNE1-208ENST00000414711 CHPF2Q9P2E5 772 aa20.63■□□□□ 0.89
CPNE1-208ENST00000414711 ANKRD13DQ6ZTN6 518 aa20.62■□□□□ 0.89
CPNE1-208ENST00000414711 UBE2Q1Q7Z7E8 422 aa20.62■□□□□ 0.89
CPNE1-208ENST00000414711 COL25A1Q9BXS0 654 aaPredicted RBP20.62■□□□□ 0.89
CPNE1-208ENST00000414711 ZSWIM8A7E2V4 1837 aa20.62■□□□□ 0.89
CPNE1-208ENST00000414711 HSP90B1P14625 803 aaKnown RBP20.61■□□□□ 0.89
CPNE1-208ENST00000414711 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
CPNE1-208ENST00000414711 ANKRD13AQ8IZ07 590 aa20.61■□□□□ 0.89
CPNE1-208ENST00000414711 NKX2-3Q8TAU0 364 aa20.61■□□□□ 0.89
CPNE1-208ENST00000414711 PLEKHF1Q96S99 279 aa20.61■□□□□ 0.89
CPNE1-208ENST00000414711 ARHGAP39Q9C0H5 1083 aa20.61■□□□□ 0.89
CPNE1-208ENST00000414711 OTOFQ9HC10 1997 aa20.61■□□□□ 0.89
CPNE1-208ENST00000414711 MTFR1Q15390 333 aa20.6■□□□□ 0.89
CPNE1-208ENST00000414711 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
CPNE1-208ENST00000414711 ZBTB38Q8NAP3 1195 aaPredicted RBP20.6■□□□□ 0.89
CPNE1-208ENST00000414711 BRI3BPQ8WY22 251 aa20.6■□□□□ 0.89
CPNE1-208ENST00000414711 OPTNQ96CV9 577 aa20.6■□□□□ 0.89
CPNE1-208ENST00000414711 MS4A4AQ96JQ5 239 aa20.6■□□□□ 0.89
CPNE1-208ENST00000414711 CCDC85AQ96PX6 553 aaPredicted RBP20.6■□□□□ 0.89
CPNE1-208ENST00000414711 COA1Q9GZY4 146 aa20.6■□□□□ 0.89
CPNE1-208ENST00000414711 UNC80Q8N2C7 3258 aa20.6■□□□□ 0.89
CPNE1-208ENST00000414711 ZNF804BA4D1E1 1349 aa20.59■□□□□ 0.89
CPNE1-208ENST00000414711 TRIM28Q13263 835 aaKnown RBP20.59■□□□□ 0.89
CPNE1-208ENST00000414711 KIF22Q14807 665 aa20.59■□□□□ 0.89
CPNE1-208ENST00000414711 ELP3Q9H9T3 547 aa20.59■□□□□ 0.89
CPNE1-208ENST00000414711 LACTBP83111 547 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-208ENST00000414711 DLGAP5Q15398 846 aa20.58■□□□□ 0.89
CPNE1-208ENST00000414711 BABAM1Q9NWV8 329 aa20.58■□□□□ 0.89
CPNE1-208ENST00000414711 MAPK8IP3Q9UPT6 1336 aa20.57■□□□□ 0.88
CPNE1-208ENST00000414711 CCL15-CCL14A0A0B4J2E2 113 aa20.57■□□□□ 0.88
CPNE1-208ENST00000414711 USP2O75604 605 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-208ENST00000414711 GNRH1P01148 92 aa20.57■□□□□ 0.88
CPNE1-208ENST00000414711 GJA8P48165 433 aa20.57■□□□□ 0.88
CPNE1-208ENST00000414711 PRMT2P55345 433 aa20.57■□□□□ 0.88
CPNE1-208ENST00000414711 CCL15Q16663 113 aa20.57■□□□□ 0.88
CPNE1-208ENST00000414711 NBPF12Q5TAG4 269 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-208ENST00000414711 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
CPNE1-208ENST00000414711 DEFB123Q8N688 67 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms