RNA–Protein interactions for RNA: ENST00000412923.6

PCDH18-202, Transcript of protocadherin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH18, Length 5,102 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-202ENST00000412923 CLIP1P30622 1438 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 SMAPO00193 183 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 RIOK3O14730 519 aaKnown RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 MARCH6O60337 910 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 EVI5O60447 810 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 ESRRBO95718 433 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 CUL4BQ13620 913 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 NANOGNBQ7Z5D8 188 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 CFAP36Q96G28 342 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 KRT82Q9NSB4 513 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 SCHIP1Q9P0W5 487 aaPredicted RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 GOLGA8QA0A0J9YX86 632 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 GOLGA8OA6NCC3 632 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 PABPN1LA6NDY0 278 aaKnown RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 GOLGA8NF8WBI6 632 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 CAND2O75155 1236 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 S100BP04271 92 aaPredicted RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 STIM1Q13586 685 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 PPP1R14BQ96C90 147 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 TOP1P11387 765 aaKnown RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 ST13P50502 369 aaKnown RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 SLC8A3P57103 927 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 PHEXP78562 749 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 SPA17Q15506 151 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 THUMPD2Q9BTF0 503 aaKnown RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 PDRG1Q9NUG6 133 aa7.12□□□□□ -1.27
PCDH18-202ENST00000412923 DDX19AQ9NUU7 478 aaKnown RBP7.12□□□□□ -1.27
PCDH18-202ENST00000412923 FSD2A1L4K1 749 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 SYCE1LA8MT33 242 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 HMGB3O15347 200 aaKnown RBP7.11□□□□□ -1.27
PCDH18-202ENST00000412923 ZNF189O75820 626 aaPredicted RBP7.11□□□□□ -1.27
PCDH18-202ENST00000412923 CETN2P41208 172 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 MATR3P43243 847 aaKnown RBP eCLIP7.11□□□□□ -1.27
PCDH18-202ENST00000412923 KCNA1Q09470 495 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 C16orf87Q6PH81 154 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 SYT10Q6XYQ8 523 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 KIFAP3Q92845 792 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 OPHN1O60890 802 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 RHOXF2BP0C7M4 288 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 ESRRGP62508 458 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 DMPKQ09013 629 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 SART3Q15020 963 aaKnown RBP7.11□□□□□ -1.27
PCDH18-202ENST00000412923 FBXO41Q8TF61 875 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 COQ7Q99807 217 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 RHOXF2Q9BQY4 288 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 PRDM16Q9HAZ2 1276 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 STAG3Q9UJ98 1225 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 ARHGAP10A1A4S6 786 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 RHOBTB1O94844 696 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 AMOTL1Q8IY63 956 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 CCDC12Q8WUD4 166 aaPredicted RBP7.11□□□□□ -1.27
PCDH18-202ENST00000412923 RWDD3Q9Y3V2 267 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 CCNB3Q8WWL7 1395 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 KIF15Q9NS87 1388 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 GOLGA8KD6RF30 607 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 KRT6AP02538 564 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 KRT6BP04259 564 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 PSMA5P28066 241 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 KRT6CP48668 564 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 RAP1GDS1P52306 607 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 VAV2P52735 878 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 GNG11P61952 73 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 APBA1Q02410 837 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 RUFY4Q6ZNE9 571 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 KIAA2013Q8IYS2 634 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 SMCR8Q8TEV9 937 aaPredicted RBP7.11□□□□□ -1.27
PCDH18-202ENST00000412923 CCDC77Q9BR77 488 aa7.11□□□□□ -1.27
PCDH18-202ENST00000412923 ZEB2O60315 1214 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 LMNAP02545 664 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 ZSCAN23Q3MJ62 389 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 ARHGAP22Q7Z5H3 698 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 GPR161Q8N6U8 529 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 GSDMBQ8TAX9 411 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 YIPF3Q9GZM5 350 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 ATP2A2P16615 1042 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 TLK2Q86UE8 772 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 LTV1Q96GA3 475 aaPredicted RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 FGD4Q96M96 766 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 SPZ1Q9BXG8 430 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 BAZ1BQ9UIG0 1483 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 FRMD3A2A2Y4 597 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 GUCY1B2O75343 617 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 HARSP12081 509 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 PDE1BQ01064 536 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 TAF11Q15544 211 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 ESCO1Q5FWF5 840 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 ENOX1Q8TC92 643 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 HVCN1Q96D96 273 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 STAMBPL1Q96FJ0 436 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 DHX29Q7Z478 1369 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 S100A1P23297 94 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 HOXC8P31273 242 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 FLIIQ13045 1269 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 MRPL28Q13084 256 aaKnown RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 TUBA3EQ6PEY2 450 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 MFN1Q8IWA4 741 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 ATP11CQ8NB49 1132 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 NEK11Q8NG66 645 aa7.1□□□□□ -1.27
PCDH18-202ENST00000412923 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.1□□□□□ -1.27
PCDH18-202ENST00000412923 LRRC59Q96AG4 307 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms