RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 IRS2Q9Y4H2 1338 aa10.22□□□□□ -0.77
RPE-204ENST00000411934 ECE2O60344 883 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 HMMRO75330 724 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 PDE8BO95263 885 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 RPS12P25398 132 aaKnown RBP10.21□□□□□ -0.77
RPE-204ENST00000411934 ATP8B2P98198 1209 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 PUM3Q15397 648 aaKnown RBP10.21□□□□□ -0.77
RPE-204ENST00000411934 METTL24Q5JXM2 366 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 CIAPIN1Q6FI81 312 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 ZNF804AQ7Z570 1209 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 SLC51AQ86UW1 340 aa10.21□□□□□ -0.77
RPE-204ENST00000411934 ZNF594Q96JF6 807 aaPredicted RBP10.21□□□□□ -0.77
RPE-204ENST00000411934 MYO3BQ8WXR4 1341 aa10.21□□□□□ -0.78
RPE-204ENST00000411934 ZNF541Q9H0D2 1346 aa10.21□□□□□ -0.78
RPE-204ENST00000411934 ZNF646O15015 1829 aaPredicted RBP10.2□□□□□ -0.78
RPE-204ENST00000411934 PLIN1O60240 522 aa10.2□□□□□ -0.78
RPE-204ENST00000411934 LRRC24Q50LG9 513 aa10.2□□□□□ -0.78
RPE-204ENST00000411934 CEP85Q6P2H3 762 aa10.2□□□□□ -0.78
RPE-204ENST00000411934 ATG9AQ7Z3C6 839 aa10.2□□□□□ -0.78
RPE-204ENST00000411934 DPF2Q92785 391 aa10.2□□□□□ -0.78
RPE-204ENST00000411934 COG6Q9Y2V7 657 aa10.2□□□□□ -0.78
RPE-204ENST00000411934 YDJCA8MPS7 323 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 G3V3G9 751 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 IFIT1P09914 478 aaKnown RBP10.19□□□□□ -0.78
RPE-204ENST00000411934 VEGFAP15692 232 aaPredicted RBP10.19□□□□□ -0.78
RPE-204ENST00000411934 FGFR2P21802 821 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 FKBP1AP62942 108 aaKnown RBP10.19□□□□□ -0.78
RPE-204ENST00000411934 CXCL9Q07325 125 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 HSP90AB4PQ58FF6 505 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 DCAF8Q5TAQ9 597 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 LPIN2Q92539 896 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 PUS3Q9BZE2 481 aaKnown RBP10.19□□□□□ -0.78
RPE-204ENST00000411934 CEP126Q9P2H0 1117 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 AKAP2Q9Y2D5 859 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 NOP58Q9Y2X3 529 aaKnown RBP10.19□□□□□ -0.78
RPE-204ENST00000411934 SCN9AQ15858 1988 aa10.19□□□□□ -0.78
RPE-204ENST00000411934 PNMA6EA0A0J9YXQ4 647 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 TAF5LO75529 589 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 VIL1P09327 827 aaKnown RBP10.18□□□□□ -0.78
RPE-204ENST00000411934 SLC5A1P13866 664 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 IL1R1P14778 569 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
RPE-204ENST00000411934 FXR2P51116 673 aaKnown RBP eCLIP10.18□□□□□ -0.78
RPE-204ENST00000411934 CAVIN4Q5BKX8 364 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 STRIP1Q5VSL9 837 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 ERC1Q8IUD2 1116 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 AGBL3Q8NEM8 1001 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 DBNDD1Q9H9R9 158 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 GPR108Q9NPR9 543 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 HACL1Q9UJ83 578 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 ADAMTSL1Q8N6G6 1762 aa10.18□□□□□ -0.78
RPE-204ENST00000411934 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
RPE-204ENST00000411934 USP17L3A6NCW0 530 aa10.17□□□□□ -0.78
RPE-204ENST00000411934 USP17L4A6NCW7 530 aa10.17□□□□□ -0.78
RPE-204ENST00000411934 KIF3CO14782 793 aa10.17□□□□□ -0.78
RPE-204ENST00000411934 DDNO94850 711 aaPredicted RBP10.17□□□□□ -0.78
RPE-204ENST00000411934 G3BP1Q13283 466 aaKnown RBP eCLIP10.17□□□□□ -0.78
RPE-204ENST00000411934 C20orf194Q5TEA3 1177 aa10.17□□□□□ -0.78
RPE-204ENST00000411934 USP17L1Q7RTZ2 530 aa10.17□□□□□ -0.78
RPE-204ENST00000411934 PNMA8AQ86V59 439 aaPredicted RBP10.17□□□□□ -0.78
RPE-204ENST00000411934 HELBQ8NG08 1087 aaPredicted RBP10.17□□□□□ -0.78
RPE-204ENST00000411934 KLHDC4Q8TBB5 520 aa10.17□□□□□ -0.78
RPE-204ENST00000411934 CD209Q9NNX6 404 aa10.17□□□□□ -0.78
RPE-204ENST00000411934 PA2G4Q9UQ80 394 aaKnown RBP10.17□□□□□ -0.78
RPE-204ENST00000411934 FAM205AQ6ZU69 1335 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 PSMD14O00487 310 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 SEMA3EO15041 775 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 TOMM70O94826 608 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 HIBADHP31937 336 aaKnown RBP10.16□□□□□ -0.78
RPE-204ENST00000411934 SCNN1DP51172 638 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 ATP2B3Q16720 1220 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 RSBN1LQ6PCB5 846 aaPredicted RBP10.16□□□□□ -0.78
RPE-204ENST00000411934 FBXO33Q7Z6M2 555 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 TXNRD3Q86VQ6 643 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 TDRD7Q8NHU6 1098 aaKnown RBP10.16□□□□□ -0.78
RPE-204ENST00000411934 RBM46Q8TBY0 533 aaKnown RBP10.16□□□□□ -0.78
RPE-204ENST00000411934 SIL1Q9H173 461 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 C1orf115Q9H7X2 142 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 NMRK2Q9NPI5 230 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 GPRC5DQ9NZD1 345 aa10.16□□□□□ -0.78
RPE-204ENST00000411934 MYH13Q9UKX3 1938 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 POTECB2RU33 542 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 IGSF3O75054 1194 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 RAD17O75943 681 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 SASH1O94885 1247 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 FSTL1Q12841 308 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 DOK7Q18PE1 504 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 USP50Q70EL3 339 aaPredicted RBP10.15□□□□□ -0.78
RPE-204ENST00000411934 VPS37DQ86XT2 251 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 C16orf71Q8IYS4 520 aaPredicted RBP10.15□□□□□ -0.78
RPE-204ENST00000411934 TBC1D22AQ8WUA7 517 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 FAM84BQ96KN1 310 aaPredicted RBP10.15□□□□□ -0.78
RPE-204ENST00000411934 GPR101Q96P66 508 aaPredicted RBP10.15□□□□□ -0.78
RPE-204ENST00000411934 TAF1DQ9H5J8 278 aaPredicted RBP10.15□□□□□ -0.78
RPE-204ENST00000411934 ADARB2Q9NS39 739 aaKnown RBP10.15□□□□□ -0.78
RPE-204ENST00000411934 GNL3LQ9NVN8 582 aaKnown RBP10.15□□□□□ -0.78
RPE-204ENST00000411934 SUGT1Q9Y2Z0 365 aa10.15□□□□□ -0.78
RPE-204ENST00000411934 H7C1D1 291 aa10.14□□□□□ -0.79
RPE-204ENST00000411934 RAB11FIP3O75154 756 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms