RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 MED23Q9ULK4 1368 aa21.45■■□□□ 1.02
MRPL55-220ENST00000411464 NBPF9Q3BBW0 867 aa21.44■■□□□ 1.02
MRPL55-220ENST00000411464 COA1Q9GZY4 146 aa21.44■■□□□ 1.02
MRPL55-220ENST00000411464 NEURL1BA8MQ27 555 aa21.43■■□□□ 1.02
MRPL55-220ENST00000411464 UBE2Q2LH0YL09 131 aa21.43■■□□□ 1.02
MRPL55-220ENST00000411464 IGHMBP2P38935 993 aaKnown RBP21.43■■□□□ 1.02
MRPL55-220ENST00000411464 TTLL12Q14166 644 aaPredicted RBP21.43■■□□□ 1.02
MRPL55-220ENST00000411464 CWF19L2Q2TBE0 894 aaKnown RBP21.43■■□□□ 1.02
MRPL55-220ENST00000411464 DACT2Q5SW24 774 aa21.43■■□□□ 1.02
MRPL55-220ENST00000411464 STRIP1Q5VSL9 837 aa21.43■■□□□ 1.02
MRPL55-220ENST00000411464 PRAMEF18Q5VWM3 479 aa21.43■■□□□ 1.02
MRPL55-220ENST00000411464 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
MRPL55-220ENST00000411464 LEMD3Q9Y2U8 911 aa21.43■■□□□ 1.02
MRPL55-220ENST00000411464 MYO3BQ8WXR4 1341 aa21.43■■□□□ 1.02
MRPL55-220ENST00000411464 NF2P35240 595 aa21.42■■□□□ 1.02
MRPL55-220ENST00000411464 SCN9AQ15858 1988 aa21.42■■□□□ 1.02
MRPL55-220ENST00000411464 MOB2Q70IA6 237 aa21.42■■□□□ 1.02
MRPL55-220ENST00000411464 UBE3BQ7Z3V4 1068 aa21.42■■□□□ 1.02
MRPL55-220ENST00000411464 CTU1Q7Z7A3 348 aaKnown RBP21.42■■□□□ 1.02
MRPL55-220ENST00000411464 MXD3Q9BW11 206 aa21.42■■□□□ 1.02
MRPL55-220ENST00000411464 H7C1W4 665 aa21.41■■□□□ 1.02
MRPL55-220ENST00000411464 SLC4A2P04920 1241 aa21.41■■□□□ 1.02
MRPL55-220ENST00000411464 MMP14P50281 582 aa21.41■■□□□ 1.02
MRPL55-220ENST00000411464 ANKRD2Q9GZV1 360 aa21.41■■□□□ 1.02
MRPL55-220ENST00000411464 WNT10BO00744 389 aa21.4■■□□□ 1.02
MRPL55-220ENST00000411464 TWISTNBQ3B726 338 aaPredicted RBP21.4■■□□□ 1.02
MRPL55-220ENST00000411464 TTLL5Q6EMB2 1281 aa21.4■■□□□ 1.02
MRPL55-220ENST00000411464 MPHOSPH8Q99549 860 aa21.4■■□□□ 1.02
MRPL55-220ENST00000411464 POLR2AP24928 1970 aaKnown RBP21.39■■□□□ 1.02
MRPL55-220ENST00000411464 SOX10P56693 466 aa21.39■■□□□ 1.01
MRPL55-220ENST00000411464 TXNRD3Q86VQ6 643 aa21.39■■□□□ 1.01
MRPL55-220ENST00000411464 HDAC9Q9UKV0 1011 aa21.39■■□□□ 1.01
MRPL55-220ENST00000411464 ZNF804BA4D1E1 1349 aa21.38■■□□□ 1.01
MRPL55-220ENST00000411464 ITGA6P23229 1130 aa21.38■■□□□ 1.01
MRPL55-220ENST00000411464 GCKRQ14397 625 aa21.38■■□□□ 1.01
MRPL55-220ENST00000411464 G2E3Q7L622 706 aa21.38■■□□□ 1.01
MRPL55-220ENST00000411464 SASH1O94885 1247 aa21.37■■□□□ 1.01
MRPL55-220ENST00000411464 KCNJ4P48050 445 aa21.37■■□□□ 1.01
MRPL55-220ENST00000411464 CCDC27Q2M243 656 aa21.37■■□□□ 1.01
MRPL55-220ENST00000411464 PLA2G12BQ9BX93 195 aa21.37■■□□□ 1.01
MRPL55-220ENST00000411464 MYH16Q9H6N6 1097 aa21.37■■□□□ 1.01
MRPL55-220ENST00000411464 TBC1D8O95759 1140 aa21.36■■□□□ 1.01
MRPL55-220ENST00000411464 TM4SF4P48230 202 aa21.36■■□□□ 1.01
MRPL55-220ENST00000411464 PKN2Q16513 984 aaKnown RBP21.36■■□□□ 1.01
MRPL55-220ENST00000411464 ARMC9Q7Z3E5 817 aa21.36■■□□□ 1.01
MRPL55-220ENST00000411464 KIAA0825Q8IV33 1275 aa21.36■■□□□ 1.01
MRPL55-220ENST00000411464 WWC1Q8IX03 1113 aa21.36■■□□□ 1.01
MRPL55-220ENST00000411464 PAPPA2Q9BXP8 1791 aa21.36■■□□□ 1.01
MRPL55-220ENST00000411464 GTF2IP78347 998 aa21.35■■□□□ 1.01
MRPL55-220ENST00000411464 FLIIQ13045 1269 aa21.35■■□□□ 1.01
MRPL55-220ENST00000411464 APOBEC3FQ8IUX4 373 aaKnown RBP21.35■■□□□ 1.01
MRPL55-220ENST00000411464 CSF1RP07333 972 aa21.34■■□□□ 1.01
MRPL55-220ENST00000411464 KLRK1P26718 216 aa21.34■■□□□ 1.01
MRPL55-220ENST00000411464 SREBF2Q12772 1141 aa21.34■■□□□ 1.01
MRPL55-220ENST00000411464 MKRN3Q13064 507 aaKnown RBP21.34■■□□□ 1.01
MRPL55-220ENST00000411464 FKBP5Q13451 457 aaPredicted RBP21.34■■□□□ 1.01
MRPL55-220ENST00000411464 PRKG1Q13976 671 aa21.34■■□□□ 1.01
MRPL55-220ENST00000411464 ZNF296Q8WUU4 475 aaPredicted RBP21.34■■□□□ 1.01
MRPL55-220ENST00000411464 PTPN12Q05209 780 aaKnown RBP21.33■■□□□ 1.01
MRPL55-220ENST00000411464 LINS1Q8NG48 757 aa21.33■■□□□ 1.01
MRPL55-220ENST00000411464 DNAAF4Q8WXU2 420 aa21.33■■□□□ 1.01
MRPL55-220ENST00000411464 HPS5Q9UPZ3 1129 aa21.33■■□□□ 1.01
MRPL55-220ENST00000411464 ANKRD18BA2A2Z9 1011 aa21.32■■□□□ 1
MRPL55-220ENST00000411464 CASP7P55210 303 aa21.32■■□□□ 1
MRPL55-220ENST00000411464 CHRNDQ07001 517 aa21.32■■□□□ 1
MRPL55-220ENST00000411464 CD209Q9NNX6 404 aa21.32■■□□□ 1
MRPL55-220ENST00000411464 IL16Q14005 1332 aa21.31■■□□□ 1
MRPL55-220ENST00000411464 GPR25O00155 361 aa21.31■■□□□ 1
MRPL55-220ENST00000411464 DLGAP5Q15398 846 aa21.31■■□□□ 1
MRPL55-220ENST00000411464 NOM1Q5C9Z4 860 aaKnown RBP21.3■■□□□ 1
MRPL55-220ENST00000411464 ZBED3Q96IU2 234 aaPredicted RBP21.3■■□□□ 1
MRPL55-220ENST00000411464 DEFB129Q9H1M3 183 aa21.3■■□□□ 1
MRPL55-220ENST00000411464 ANGEL1Q9UNK9 670 aaKnown RBP21.3■■□□□ 1
MRPL55-220ENST00000411464 IFIT5Q13325 482 aaKnown RBP21.29■■□□□ 1
MRPL55-220ENST00000411464 CCDC184Q52MB2 194 aa21.29■■□□□ 1
MRPL55-220ENST00000411464 LDLRAD1Q5T700 205 aa21.29■■□□□ 1
MRPL55-220ENST00000411464 TNRC18O15417 2968 aaPredicted RBP21.29■■□□□ 1
MRPL55-220ENST00000411464 AKAP11Q9UKA4 1901 aa21.28■■□□□ 1
MRPL55-220ENST00000411464 TAF5LO75529 589 aa21.28■■□□□ 1
MRPL55-220ENST00000411464 SPRYD7Q5W111 196 aa21.28■■□□□ 1
MRPL55-220ENST00000411464 HELBQ8NG08 1087 aaPredicted RBP21.28■■□□□ 1
MRPL55-220ENST00000411464 SLC10A4Q96EP9 437 aa21.28■■□□□ 1
MRPL55-220ENST00000411464 PSME4Q14997 1843 aa21.27■■□□□ 1
MRPL55-220ENST00000411464 SNAP23O00161 211 aa21.27■■□□□ 1
MRPL55-220ENST00000411464 ALDH1A1P00352 501 aa21.27■■□□□ 1
MRPL55-220ENST00000411464 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
MRPL55-220ENST00000411464 C15orf52Q6ZUT6 534 aaKnown RBP21.27■■□□□ 1
MRPL55-220ENST00000411464 CHMP3Q9Y3E7 222 aa21.27■■□□□ 1
MRPL55-220ENST00000411464 MYO1BO43795 1136 aa21.26■□□□□ 0.99
MRPL55-220ENST00000411464 PPP1R12BO60237 982 aaPredicted RBP21.26■□□□□ 0.99
MRPL55-220ENST00000411464 FKTNO75072 461 aa21.26■□□□□ 0.99
MRPL55-220ENST00000411464 INHBEP58166 350 aa21.26■□□□□ 0.99
MRPL55-220ENST00000411464 FBXO46Q6PJ61 603 aaPredicted RBP21.26■□□□□ 0.99
MRPL55-220ENST00000411464 ZNF804AQ7Z570 1209 aa21.26■□□□□ 0.99
MRPL55-220ENST00000411464 CERS5Q8N5B7 392 aa21.26■□□□□ 0.99
MRPL55-220ENST00000411464 CFHR5Q9BXR6 569 aa21.26■□□□□ 0.99
MRPL55-220ENST00000411464 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.26■□□□□ 0.99
MRPL55-220ENST00000411464 F8W031 263 aaPredicted RBP21.25■□□□□ 0.99
MRPL55-220ENST00000411464 VAMP4O75379 141 aa21.25■□□□□ 0.99
MRPL55-220ENST00000411464 MTMR14Q8NCE2 650 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms