RNA–Protein interactions for RNA: ENST00000407319.6

TRIOBP-205, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIOBP, Length 2,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-205ENST00000407319 CCDC85AQ96PX6 553 aaPredicted RBP32.51■■■□□ 2.79
TRIOBP-205ENST00000407319 CHMP3Q9Y3E7 222 aa32.51■■■□□ 2.79
TRIOBP-205ENST00000407319 PNPLA7Q6ZV29 1317 aa32.51■■■□□ 2.79
TRIOBP-205ENST00000407319 SLC27A2O14975 620 aa32.5■■■□□ 2.79
TRIOBP-205ENST00000407319 RGL2O15211 777 aa32.5■■■□□ 2.79
TRIOBP-205ENST00000407319 RNF20Q5VTR2 975 aa32.5■■■□□ 2.79
TRIOBP-205ENST00000407319 LAMB2P55268 1798 aa32.5■■■□□ 2.79
TRIOBP-205ENST00000407319 SETDB2Q96T68 719 aa32.5■■■□□ 2.79
TRIOBP-205ENST00000407319 ALDH8A1Q9H2A2 487 aaPredicted RBP32.5■■■□□ 2.79
TRIOBP-205ENST00000407319 DBNLQ9UJU6 430 aaKnown RBP32.5■■■□□ 2.79
TRIOBP-205ENST00000407319 SYCE3A1L190 88 aa32.49■■■□□ 2.79
TRIOBP-205ENST00000407319 HCLS1P14317 486 aaPredicted RBP32.49■■■□□ 2.79
TRIOBP-205ENST00000407319 HMGB2P26583 209 aaKnown RBP32.49■■■□□ 2.79
TRIOBP-205ENST00000407319 KCNJ4P48050 445 aa32.49■■■□□ 2.79
TRIOBP-205ENST00000407319 USP48Q86UV5 1035 aa32.49■■■□□ 2.79
TRIOBP-205ENST00000407319 SH3TC1Q8TE82 1336 aa32.49■■■□□ 2.79
TRIOBP-205ENST00000407319 TSGA10IPQ3SY00 556 aa32.48■■■□□ 2.79
TRIOBP-205ENST00000407319 ATP6V1DQ9Y5K8 247 aa32.48■■■□□ 2.79
TRIOBP-205ENST00000407319 TFCP2Q12800 502 aa32.48■■■□□ 2.79
TRIOBP-205ENST00000407319 NFIXQ14938 502 aa32.48■■■□□ 2.79
TRIOBP-205ENST00000407319 HMG20BQ9P0W2 317 aa32.48■■■□□ 2.79
TRIOBP-205ENST00000407319 F13A1P00488 732 aa32.47■■■□□ 2.79
TRIOBP-205ENST00000407319 LARP6Q9BRS8 491 aaKnown RBP32.47■■■□□ 2.79
TRIOBP-205ENST00000407319 SLC15A2Q16348 729 aa32.47■■■□□ 2.79
TRIOBP-205ENST00000407319 PLA2G12BQ9BX93 195 aa32.47■■■□□ 2.79
TRIOBP-205ENST00000407319 ERFEQ4G0M1 354 aa32.46■■■□□ 2.79
TRIOBP-205ENST00000407319 CCDC83Q8IWF9 413 aa32.46■■■□□ 2.79
TRIOBP-205ENST00000407319 CCDC24Q8N4L8 307 aa32.46■■■□□ 2.79
TRIOBP-205ENST00000407319 PDLIM2Q96JY6 352 aa32.46■■■□□ 2.79
TRIOBP-205ENST00000407319 PDIA4P13667 645 aaKnown RBP32.45■■■□□ 2.79
TRIOBP-205ENST00000407319 GJB2P29033 226 aa32.44■■■□□ 2.78
TRIOBP-205ENST00000407319 ST3GAL1Q11201 340 aa32.44■■■□□ 2.78
TRIOBP-205ENST00000407319 ME3Q16798 604 aa32.44■■■□□ 2.78
TRIOBP-205ENST00000407319 QSER1Q2KHR3 1735 aa32.44■■■□□ 2.78
TRIOBP-205ENST00000407319 ANKRD1Q15327 319 aa32.44■■■□□ 2.78
TRIOBP-205ENST00000407319 HS1BP3Q53T59 392 aa32.44■■■□□ 2.78
TRIOBP-205ENST00000407319 STK32BQ9NY57 414 aa32.44■■■□□ 2.78
TRIOBP-205ENST00000407319 GADD45BO75293 160 aaPredicted RBP32.43■■■□□ 2.78
TRIOBP-205ENST00000407319 CTSWP56202 376 aa32.43■■■□□ 2.78
TRIOBP-205ENST00000407319 NBPF5PQ86XG9 351 aaPredicted RBP32.43■■■□□ 2.78
TRIOBP-205ENST00000407319 ABCC12Q96J65 1359 aa32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 PDE8AO60658 829 aa32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 TAF5LO75529 589 aa32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 CCDC125Q86Z20 511 aa32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 GDPD2Q9HCC8 539 aa32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 ZNF589Q86UQ0 364 aaPredicted RBP32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 TTLL11Q8NHH1 800 aa32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 HAUS7Q99871 368 aa32.42■■■□□ 2.78
TRIOBP-205ENST00000407319 CSF1RP07333 972 aa32.41■■■□□ 2.78
TRIOBP-205ENST00000407319 BLOC1S2Q6QNY1 142 aa32.41■■■□□ 2.78
TRIOBP-205ENST00000407319 MTMR6Q9Y217 621 aa32.41■■■□□ 2.78
TRIOBP-205ENST00000407319 TICAM2Q86XR7 235 aa32.41■■■□□ 2.78
TRIOBP-205ENST00000407319 ZNF594Q96JF6 807 aaPredicted RBP32.41■■■□□ 2.78
TRIOBP-205ENST00000407319 TPCN1Q9ULQ1 816 aa32.41■■■□□ 2.78
TRIOBP-205ENST00000407319 CARMIL3Q8ND23 1372 aa32.4■■■□□ 2.78
TRIOBP-205ENST00000407319 GREM2Q9H772 168 aa32.4■■■□□ 2.78
TRIOBP-205ENST00000407319 CNPY2Q9Y2B0 182 aa32.4■■■□□ 2.78
TRIOBP-205ENST00000407319 TAF1P21675 1872 aa32.4■■■□□ 2.78
TRIOBP-205ENST00000407319 RPS6KB1P23443 525 aa32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 FOXD4L6Q3SYB3 417 aaPredicted RBP32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 FOXD4L3Q6VB84 417 aaPredicted RBP32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 C3orf67Q6ZVT6 689 aa32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 GPR108Q9NPR9 543 aa32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 KLHL34Q8N239 644 aa32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 FLAD1Q8NFF5 587 aa32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 DBNDD2Q9BQY9 259 aa32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 PDGFDQ9GZP0 370 aaPredicted RBP32.39■■■□□ 2.78
TRIOBP-205ENST00000407319 GTF2E1P29083 439 aaPredicted RBP32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 TM4SF1P30408 202 aa32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 UBE2HP62256 183 aa32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 KRT32Q14532 448 aa32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 UPF1Q92900 1129 aaKnown RBP eCLIP32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 EDC3Q96F86 508 aaKnown RBP32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 TSPY26PQ9H489 355 aa32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 TNRC6CQ9HCJ0 1690 aaKnown RBP32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 DDR1Q08345 913 aa32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 CSPP1Q1MSJ5 1256 aa32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 MSL1Q68DK7 614 aa32.38■■■□□ 2.77
TRIOBP-205ENST00000407319 SPEF2Q9C093 1822 aa32.37■■■□□ 2.77
TRIOBP-205ENST00000407319 NYXQ9GZU5 481 aa32.37■■■□□ 2.77
TRIOBP-205ENST00000407319 ZSCAN30Q86W11 494 aa32.36■■■□□ 2.77
TRIOBP-205ENST00000407319 ZNF609O15014 1411 aa32.36■■■□□ 2.77
TRIOBP-205ENST00000407319 COL4A1P02462 1669 aa32.35■■■□□ 2.77
TRIOBP-205ENST00000407319 TPTE2Q6XPS3 522 aa32.35■■■□□ 2.77
TRIOBP-205ENST00000407319 ATG9AQ7Z3C6 839 aa32.35■■■□□ 2.77
TRIOBP-205ENST00000407319 ITGA6P23229 1130 aa32.34■■■□□ 2.77
TRIOBP-205ENST00000407319 CCDC57Q2TAC2 916 aa32.34■■■□□ 2.77
TRIOBP-205ENST00000407319 CCDC183Q5T5S1 534 aa32.34■■■□□ 2.77
TRIOBP-205ENST00000407319 U3KPZ7 1027 aaPredicted RBP32.34■■■□□ 2.77
TRIOBP-205ENST00000407319 LETM1O95202 739 aaPredicted RBP32.33■■■□□ 2.77
TRIOBP-205ENST00000407319 POLRMTO00411 1230 aaKnown RBP32.33■■■□□ 2.77
TRIOBP-205ENST00000407319 NPHP1O15259 732 aa32.33■■■□□ 2.77
TRIOBP-205ENST00000407319 TOB2Q14106 344 aaPredicted RBP32.33■■■□□ 2.77
TRIOBP-205ENST00000407319 NECAB1Q8N987 351 aa32.33■■■□□ 2.77
TRIOBP-205ENST00000407319 SERPINB2P05120 415 aa32.32■■■□□ 2.76
TRIOBP-205ENST00000407319 IL15P40933 162 aaPredicted RBP32.32■■■□□ 2.76
TRIOBP-205ENST00000407319 IFIT5Q13325 482 aaKnown RBP32.32■■■□□ 2.76
TRIOBP-205ENST00000407319 MCMDC2Q4G0Z9 681 aa32.32■■■□□ 2.76
TRIOBP-205ENST00000407319 KBTBD3Q8NAB2 608 aa32.32■■■□□ 2.76
TRIOBP-205ENST00000407319 TAF6LQ9Y6J9 622 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms