RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 KIAA1524Q8TCG1 905 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 TSC1Q92574 1164 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 MAST3O60307 1309 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 PCDH11XQ9BZA7 1347 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 PCDH11YQ9BZA8 1340 aa18.47■□□□□ 0.55
TOM1-203ENST00000404284 ADD1P35611 737 aaKnown RBP18.46■□□□□ 0.55
TOM1-203ENST00000404284 ZNF594Q96JF6 807 aaPredicted RBP18.46■□□□□ 0.55
TOM1-203ENST00000404284 PYCARDQ9ULZ3 195 aa18.46■□□□□ 0.55
TOM1-203ENST00000404284 TPM3P06753 285 aa18.46■□□□□ 0.55
TOM1-203ENST00000404284 HSPD1P10809 573 aaKnown RBP18.46■□□□□ 0.55
TOM1-203ENST00000404284 APOBRQ0VD83 1088 aa18.46■□□□□ 0.55
TOM1-203ENST00000404284 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
TOM1-203ENST00000404284 CCDC191Q8NCU4 936 aa18.45■□□□□ 0.54
TOM1-203ENST00000404284 PRIMPOLQ96LW4 560 aa18.45■□□□□ 0.54
TOM1-203ENST00000404284 ZBTB3Q9H5J0 574 aa18.45■□□□□ 0.54
TOM1-203ENST00000404284 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
TOM1-203ENST00000404284 PTPDC1A2A3K4 754 aa18.45■□□□□ 0.54
TOM1-203ENST00000404284 CADPS2Q86UW7 1296 aa18.45■□□□□ 0.54
TOM1-203ENST00000404284 A0A1B0GUL7 405 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 E7EWF7 191 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 CIAO1O76071 339 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 ZCRB1Q8TBF4 217 aaKnown RBP18.44■□□□□ 0.54
TOM1-203ENST00000404284 CFAP45Q9UL16 551 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 GOLGA6L6A8MZA4 724 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 IFIT1P09914 478 aaKnown RBP18.44■□□□□ 0.54
TOM1-203ENST00000404284 TDRD7Q8NHU6 1098 aaKnown RBP18.44■□□□□ 0.54
TOM1-203ENST00000404284 ATG3Q9NT62 314 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 TNS2Q63HR2 1409 aa18.44■□□□□ 0.54
TOM1-203ENST00000404284 ERVV-2B6SEH9 535 aa18.43■□□□□ 0.54
TOM1-203ENST00000404284 RNF113AO15541 343 aaKnown RBP18.43■□□□□ 0.54
TOM1-203ENST00000404284 HMGN5P82970 282 aaKnown RBP18.43■□□□□ 0.54
TOM1-203ENST00000404284 IPO4Q8TEX9 1081 aaKnown RBP18.43■□□□□ 0.54
TOM1-203ENST00000404284 PUS3Q9BZE2 481 aaKnown RBP18.43■□□□□ 0.54
TOM1-203ENST00000404284 SHANK3Q9BYB0 1731 aa18.43■□□□□ 0.54
TOM1-203ENST00000404284 M0R2C6 588 aa18.42■□□□□ 0.54
TOM1-203ENST00000404284 FTOQ9C0B1 505 aaKnown RBP eCLIP18.42■□□□□ 0.543e-7■■■■■ 35.2
TOM1-203ENST00000404284 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.42■□□□□ 0.544e-7■□□□□ 9.1
TOM1-203ENST00000404284 DNAJC25Q9H1X3 360 aa18.42■□□□□ 0.54
TOM1-203ENST00000404284 NCOA5Q9HCD5 579 aaKnown RBP18.42■□□□□ 0.54
TOM1-203ENST00000404284 RCOR1Q9UKL0 485 aa18.42■□□□□ 0.54
TOM1-203ENST00000404284 NWD2Q9ULI1 1742 aa18.42■□□□□ 0.54
TOM1-203ENST00000404284 PTGS1P23219 599 aa18.41■□□□□ 0.54
TOM1-203ENST00000404284 GTF2F1P35269 517 aaKnown RBP eCLIP18.41■□□□□ 0.542e-7■■■■■ 40.4
TOM1-203ENST00000404284 FOSBP53539 338 aa18.41■□□□□ 0.54
TOM1-203ENST00000404284 CCT2P78371 535 aaKnown RBP18.41■□□□□ 0.54
TOM1-203ENST00000404284 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
TOM1-203ENST00000404284 ATP2B3Q16720 1220 aa18.41■□□□□ 0.54
TOM1-203ENST00000404284 PLA2G4DQ86XP0 818 aa18.41■□□□□ 0.54
TOM1-203ENST00000404284 PDIA3P30101 505 aaKnown RBP18.41■□□□□ 0.54
TOM1-203ENST00000404284 CEBPZQ03701 1054 aaKnown RBP18.41■□□□□ 0.54
TOM1-203ENST00000404284 OSBP2Q969R2 916 aa18.41■□□□□ 0.54
TOM1-203ENST00000404284 IGSF3O75054 1194 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 ZNF165P49910 485 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 TTLL5Q6EMB2 1281 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 ZNF710Q8N1W2 664 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 PLCD3Q8N3E9 789 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
TOM1-203ENST00000404284 FOXP2O15409 715 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 ZNF75DP51815 510 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 TOM1L2Q6ZVM7 507 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 ZNF274Q96GC6 653 aaPredicted RBP18.4■□□□□ 0.54
TOM1-203ENST00000404284 USP28Q96RU2 1077 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 ISCA1Q9BUE6 129 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
TOM1-203ENST00000404284 CHST3Q7LGC8 479 aa18.39■□□□□ 0.54
TOM1-203ENST00000404284 ILDR1Q86SU0 546 aaPredicted RBP18.39■□□□□ 0.54
TOM1-203ENST00000404284 GOLPH3LQ9H4A5 285 aa18.39■□□□□ 0.54
TOM1-203ENST00000404284 FBXL16Q8N461 479 aa18.39■□□□□ 0.53
TOM1-203ENST00000404284 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.53
TOM1-203ENST00000404284 CARMIL3Q8ND23 1372 aa18.38■□□□□ 0.53
TOM1-203ENST00000404284 CEP126Q9P2H0 1117 aa18.38■□□□□ 0.53
TOM1-203ENST00000404284 FAM177BA6PVY3 158 aa18.38■□□□□ 0.53
TOM1-203ENST00000404284 ZBTB22O15209 634 aa18.38■□□□□ 0.53
TOM1-203ENST00000404284 ADORA1P30542 326 aa18.38■□□□□ 0.53
TOM1-203ENST00000404284 EVCP57679 992 aa18.38■□□□□ 0.53
TOM1-203ENST00000404284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.38■□□□□ 0.53
TOM1-203ENST00000404284 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
TOM1-203ENST00000404284 TOGARAM1Q9Y4F4 1720 aa18.38■□□□□ 0.53
TOM1-203ENST00000404284 SPDYE4A6NLX3 237 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 PPFIA3O75145 1194 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 CAVIN2O95810 425 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
TOM1-203ENST00000404284 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 CCDC186Q7Z3E2 898 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 TRIM5Q9C035 493 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 DDX60Q8IY21 1712 aaKnown RBP18.37■□□□□ 0.53
TOM1-203ENST00000404284 FDPSP14324 419 aaKnown RBP18.37■□□□□ 0.53
TOM1-203ENST00000404284 IQCB1Q15051 598 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 TAF7LQ5H9L4 462 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 NRBP1Q9UHY1 535 aa18.37■□□□□ 0.53
TOM1-203ENST00000404284 FKBP4Q02790 459 aaKnown RBP eCLIP18.36■□□□□ 0.53
TOM1-203ENST00000404284 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
TOM1-203ENST00000404284 C11orf57Q6ZUT1 292 aaPredicted RBP18.36■□□□□ 0.53
TOM1-203ENST00000404284 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
TOM1-203ENST00000404284 XIRP1Q702N8 1843 aaKnown RBP18.36■□□□□ 0.53
TOM1-203ENST00000404284 GUCY1B3Q02153 619 aa18.36■□□□□ 0.53
TOM1-203ENST00000404284 TCIRG1Q13488 830 aa18.36■□□□□ 0.53
TOM1-203ENST00000404284 CCDC57Q2TAC2 916 aa18.36■□□□□ 0.53
TOM1-203ENST00000404284 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms