RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 AGBL3Q8NEM8 1001 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 HELBQ8NG08 1087 aaPredicted RBP16.8■□□□□ 0.28
SDF4-203ENST00000403997 FBXW7Q969H0 707 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 SUCLG2Q96I99 432 aa16.8■□□□□ 0.28
SDF4-203ENST00000403997 ZNF594Q96JF6 807 aaPredicted RBP16.8■□□□□ 0.28
SDF4-203ENST00000403997 SCN9AQ15858 1988 aa16.79■□□□□ 0.28
SDF4-203ENST00000403997 TAF5LO75529 589 aa16.79■□□□□ 0.28
SDF4-203ENST00000403997 CELF2O95319 508 aaKnown RBP16.79■□□□□ 0.28
SDF4-203ENST00000403997 HSPA1AP0DMV8 641 aaKnown RBP16.79■□□□□ 0.28
SDF4-203ENST00000403997 HSPA1BP0DMV9 641 aaKnown RBP16.79■□□□□ 0.28
SDF4-203ENST00000403997 KIF4BQ2VIQ3 1234 aa16.79■□□□□ 0.28
SDF4-203ENST00000403997 USP48Q86UV5 1035 aa16.79■□□□□ 0.28
SDF4-203ENST00000403997 ZNF408Q9H9D4 720 aa16.79■□□□□ 0.28
SDF4-203ENST00000403997 CNNM1Q9NRU3 951 aa16.79■□□□□ 0.28
SDF4-203ENST00000403997 RASSF10A6NK89 507 aa16.78■□□□□ 0.28
SDF4-203ENST00000403997 SNAP23O00161 211 aa16.78■□□□□ 0.28
SDF4-203ENST00000403997 PLIN1O60240 522 aa16.78■□□□□ 0.28
SDF4-203ENST00000403997 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
SDF4-203ENST00000403997 KLRK1P26718 216 aa16.78■□□□□ 0.28
SDF4-203ENST00000403997 DCPSQ96C86 337 aaKnown RBP16.78■□□□□ 0.28
SDF4-203ENST00000403997 KAZALD1Q96I82 304 aa16.78■□□□□ 0.28
SDF4-203ENST00000403997 PCNTO95613 3336 aa16.78■□□□□ 0.28
SDF4-203ENST00000403997 UTYO14607 1347 aa16.77■□□□□ 0.28
SDF4-203ENST00000403997 USP17L8P0C7I0 530 aa16.77■□□□□ 0.28
SDF4-203ENST00000403997 ZNF280AP59817 542 aaPredicted RBP16.77■□□□□ 0.28
SDF4-203ENST00000403997 PAXIP1Q6ZW49 1069 aaPredicted RBP16.77■□□□□ 0.28
SDF4-203ENST00000403997 KRT26Q7Z3Y9 468 aa16.77■□□□□ 0.28
SDF4-203ENST00000403997 GMLQ99445 158 aa16.77■□□□□ 0.28
SDF4-203ENST00000403997 DACT2Q5SW24 774 aa16.76■□□□□ 0.27
SDF4-203ENST00000403997 STRIP1Q5VSL9 837 aa16.76■□□□□ 0.27
SDF4-203ENST00000403997 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
SDF4-203ENST00000403997 MXD3Q9BW11 206 aa16.76■□□□□ 0.27
SDF4-203ENST00000403997 BICC1Q9H694 974 aaKnown RBP16.76■□□□□ 0.27
SDF4-203ENST00000403997 TLL2Q9Y6L7 1015 aa16.76■□□□□ 0.27
SDF4-203ENST00000403997 WDR33Q9C0J8 1336 aaKnown RBP16.75■□□□□ 0.27
SDF4-203ENST00000403997 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
SDF4-203ENST00000403997 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
SDF4-203ENST00000403997 CD209Q9NNX6 404 aa16.75■□□□□ 0.27
SDF4-203ENST00000403997 MYOZ2Q9NPC6 264 aa16.75■□□□□ 0.27
SDF4-203ENST00000403997 NOB1Q9ULX3 412 aaKnown RBP16.75■□□□□ 0.27
SDF4-203ENST00000403997 ECE1P42892 770 aa16.74■□□□□ 0.27
SDF4-203ENST00000403997 GTF2IP78347 998 aa16.74■□□□□ 0.27
SDF4-203ENST00000403997 GRM1Q13255 1194 aa16.74■□□□□ 0.27
SDF4-203ENST00000403997 SCARF1Q14162 830 aa16.74■□□□□ 0.27
SDF4-203ENST00000403997 C15orf52Q6ZUT6 534 aaKnown RBP16.74■□□□□ 0.27
SDF4-203ENST00000403997 SULF1Q8IWU6 871 aa16.74■□□□□ 0.27
SDF4-203ENST00000403997 OGFOD1Q8N543 542 aa16.74■□□□□ 0.27
SDF4-203ENST00000403997 GGA3Q9NZ52 723 aa16.74■□□□□ 0.27
SDF4-203ENST00000403997 TRPM7Q96QT4 1865 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 ASTN2O75129 1339 aaPredicted RBP16.73■□□□□ 0.27
SDF4-203ENST00000403997 MYO3BQ8WXR4 1341 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 ZNF609O15014 1411 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 ADM5C9JUS6 153 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 RABL6Q3YEC7 729 aaPredicted RBP16.73■□□□□ 0.27
SDF4-203ENST00000403997 CYP4F22Q6NT55 531 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 SAPCD2Q86UD0 394 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 ANKRD44Q8N8A2 993 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 CAPNS2Q96L46 248 aa16.73■□□□□ 0.27
SDF4-203ENST00000403997 PUS3Q9BZE2 481 aaKnown RBP16.73■□□□□ 0.27
SDF4-203ENST00000403997 POLR2AP24928 1970 aaKnown RBP16.72■□□□□ 0.27
SDF4-203ENST00000403997 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
SDF4-203ENST00000403997 BRPF1P55201 1214 aaPredicted RBP16.72■□□□□ 0.27
SDF4-203ENST00000403997 ANGEL2Q5VTE6 544 aaKnown RBP16.72■□□□□ 0.27
SDF4-203ENST00000403997 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
SDF4-203ENST00000403997 API5Q9BZZ5 524 aaKnown RBP16.72■□□□□ 0.27
SDF4-203ENST00000403997 IRS2Q9Y4H2 1338 aa16.71■□□□□ 0.27
SDF4-203ENST00000403997 AIDAQ96BJ3 306 aa16.71■□□□□ 0.27
SDF4-203ENST00000403997 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
SDF4-203ENST00000403997 PSME4Q14997 1843 aa16.7■□□□□ 0.26
SDF4-203ENST00000403997 MMP14P50281 582 aa16.7■□□□□ 0.26
SDF4-203ENST00000403997 HNRNPUQ00839 825 aaKnown RBP eCLIP16.7■□□□□ 0.26
SDF4-203ENST00000403997 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
SDF4-203ENST00000403997 KIAA0825Q8IV33 1275 aa16.7■□□□□ 0.26
SDF4-203ENST00000403997 WBP1LQ9NX94 342 aa16.7■□□□□ 0.26
SDF4-203ENST00000403997 HDAC9Q9UKV0 1011 aa16.7■□□□□ 0.26
SDF4-203ENST00000403997 MROH5Q6ZUA9 1318 aa16.7■□□□□ 0.26
SDF4-203ENST00000403997 FOXN1O15353 648 aa16.69■□□□□ 0.26
SDF4-203ENST00000403997 UBTFL1P0CB47 393 aaPredicted RBP16.69■□□□□ 0.26
SDF4-203ENST00000403997 IL1R1P14778 569 aa16.69■□□□□ 0.26
SDF4-203ENST00000403997 MAP2K1Q02750 393 aaPredicted RBP16.69■□□□□ 0.26
SDF4-203ENST00000403997 NBPF9Q3BBW0 867 aa16.69■□□□□ 0.26
SDF4-203ENST00000403997 LRRC24Q50LG9 513 aa16.69■□□□□ 0.26
SDF4-203ENST00000403997 METTL24Q5JXM2 366 aa16.69■□□□□ 0.26
SDF4-203ENST00000403997 C2orf69Q8N8R5 385 aa16.69■□□□□ 0.26
SDF4-203ENST00000403997 GBA2Q9HCG7 927 aaPredicted RBP16.69■□□□□ 0.26
SDF4-203ENST00000403997 WNT10BO00744 389 aa16.68■□□□□ 0.26
SDF4-203ENST00000403997 HIBADHP31937 336 aaKnown RBP16.68■□□□□ 0.26
SDF4-203ENST00000403997 HUNKP57058 714 aa16.68■□□□□ 0.26
SDF4-203ENST00000403997 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
SDF4-203ENST00000403997 CDCA5Q96FF9 252 aa16.68■□□□□ 0.26
SDF4-203ENST00000403997 HHIPL1Q96JK4 782 aa16.68■□□□□ 0.26
SDF4-203ENST00000403997 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
SDF4-203ENST00000403997 PITPNM2Q9BZ72 1349 aa16.68■□□□□ 0.26
SDF4-203ENST00000403997 GYG1P46976 350 aa16.67■□□□□ 0.26
SDF4-203ENST00000403997 CERS5Q8N5B7 392 aa16.67■□□□□ 0.26
SDF4-203ENST00000403997 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
SDF4-203ENST00000403997 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
SDF4-203ENST00000403997 JAG2Q9Y219 1238 aa16.67■□□□□ 0.26
SDF4-203ENST00000403997 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
SDF4-203ENST00000403997 F8W031 263 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms