RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 CARMIL1Q5VZK9 1371 aa4.92□□□□□ -1.62
CCDC178-204ENST00000403303 FYCO1Q9BQS8 1478 aa4.92□□□□□ -1.62
CCDC178-204ENST00000403303 SAFB2Q14151 953 aaKnown RBP eCLIP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 TTF1Q15361 905 aaPredicted RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 TLR1Q15399 786 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 PDXDC2PQ6P474 469 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 FBXL19Q6PCT2 694 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 BRICD5Q6PL45 260 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 CMTR1Q8N1G2 835 aaKnown RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 JARID2Q92833 1246 aaPredicted RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 KCTD15Q96SI1 283 aaPredicted RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 EVA1BQ9NVM1 165 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 TERF2IPQ9NYB0 399 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 HPS5Q9UPZ3 1129 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 PRG4Q92954 1404 aaPredicted RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 UACAQ9BZF9 1416 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 ALDH1L1O75891 902 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 GJA8P48165 433 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 SLC4A8Q2Y0W8 1093 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 ALDH16A1Q8IZ83 802 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 FAM129BQ96TA1 746 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 METTL5Q9NRN9 209 aaKnown RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 BRDTQ58F21 947 aaPredicted RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 LHFPL2Q6ZUX7 228 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 VASH1Q7L8A9 365 aaPredicted RBP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 DDX42Q86XP3 938 aaKnown RBP eCLIP4.91□□□□□ -1.62
CCDC178-204ENST00000403303 ZNF516Q92618 1163 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 LRCH3Q96II8 777 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 OSBPL3Q9H4L5 887 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 C12orf49Q9H741 205 aa4.91□□□□□ -1.62
CCDC178-204ENST00000403303 ZEB1P37275 1124 aaPredicted RBP4.9□□□□□ -1.62
CCDC178-204ENST00000403303 PHKA2P46019 1235 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 ITKQ08881 620 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 SKOR2Q2VWA4 1001 aaPredicted RBP4.9□□□□□ -1.62
CCDC178-204ENST00000403303 VARS2Q5ST30 1063 aaKnown RBP4.9□□□□□ -1.62
CCDC178-204ENST00000403303 CNNM4Q6P4Q7 775 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 C6orf15Q6UXA7 325 aaPredicted RBP4.9□□□□□ -1.62
CCDC178-204ENST00000403303 TMTC2Q8N394 836 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 PAF1Q8N7H5 531 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 CCDC74AQ96AQ1 378 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 EAF1Q96JC9 268 aaPredicted RBP4.9□□□□□ -1.62
CCDC178-204ENST00000403303 DMRTB1Q96MA1 342 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 CSRNP1Q96S65 589 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 BCO2Q9BYV7 579 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 AK5Q9Y6K8 562 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 MAGI2Q86UL8 1455 aa4.9□□□□□ -1.62
CCDC178-204ENST00000403303 NFX1Q12986 1120 aaKnown RBP4.9□□□□□ -1.63
CCDC178-204ENST00000403303 RAB33AQ14088 237 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 ZNF296Q8WUU4 475 aaPredicted RBP4.9□□□□□ -1.63
CCDC178-204ENST00000403303 ANTXR1Q9H6X2 564 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 PTPRHQ9HD43 1115 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 WBP1LQ9NX94 342 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 ATP8A1Q9Y2Q0 1164 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 VWDEQ8N2E2 1590 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 ARHGAP35Q9NRY4 1499 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 L1CAMP32004 1257 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 TRIP4Q15650 581 aaPredicted RBP4.9□□□□□ -1.63
CCDC178-204ENST00000403303 Q3C1V9 767 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 ZNF280CQ8ND82 737 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 FERD3LQ96RJ6 166 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 GMLQ99445 158 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 ABCC1P33527 1531 aa4.9□□□□□ -1.63
CCDC178-204ENST00000403303 KDM5DQ9BY66 1539 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 EREGO14944 169 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 NEFLP07196 543 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 MASP1P48740 699 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 SERINC3Q13530 473 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 TAF1CQ15572 869 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-204ENST00000403303 YOD1Q5VVQ6 348 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-204ENST00000403303 LRRC69Q6ZNQ3 347 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 IFT43Q96FT9 208 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 PHACTR1Q9C0D0 580 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-204ENST00000403303 CCDC18Q5T9S5 1454 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 ARHGEF12Q9NZN5 1544 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 CDC25BP30305 580 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 SSRP1Q08945 709 aaKnown RBP4.89□□□□□ -1.63
CCDC178-204ENST00000403303 PPP2R5AQ15172 486 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 HSP90AB4PQ58FF6 505 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 IL31Q6EBC2 164 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 ALG1LQ6GMV1 187 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 SH3BP5LQ7L8J4 393 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 ATL2Q8NHH9 583 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 LEO1Q8WVC0 666 aaPredicted RBP4.89□□□□□ -1.63
CCDC178-204ENST00000403303 APPBP2Q92624 585 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 L3MBTL2Q969R5 705 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 PLCD4Q9BRC7 762 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 PTCH2Q9Y6C5 1203 aa4.89□□□□□ -1.63
CCDC178-204ENST00000403303 EIF4A3P38919 411 aaKnown RBP4.88□□□□□ -1.63
CCDC178-204ENST00000403303 NFKB2Q00653 900 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 DESI1Q6ICB0 168 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 RABGEF1Q9UJ41 708 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 KIDINS220Q9ULH0 1771 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 FHOD3Q2V2M9 1422 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 NEURL4Q96JN8 1562 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 ATP10BO94823 1461 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 RAPGEF3O95398 923 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 NEK3P51956 506 aa4.88□□□□□ -1.63
CCDC178-204ENST00000403303 IFRD2Q12894 506 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms