RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 RTL1A6NKG5 1358 aa15.18■□□□□ 0.02
LDLRAD4-203ENST00000399848 CALML3P27482 149 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 CCDC42Q96M95 316 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 MRVI1Q9Y6F6 885 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 HAND2P61296 217 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 CCDC50Q8IVM0 306 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 SWAP70Q9UH65 585 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 TSPOAP1O95153 1857 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 PTGS1P23219 599 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 NCBP1Q09161 790 aaKnown RBP15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 KIF22Q14807 665 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 SELENOSQ9BQE4 189 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 CLCN1P35523 988 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 CFAP157Q5JU67 520 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 RGS22Q8NE09 1264 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 ANKRD24Q8TF21 1146 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 C6orf229H3BNL8 230 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 GAS8O95995 478 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 NBPF11Q86T75 865 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 AK9Q5TCS8 1911 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 NEK11Q8NG66 645 aa15.17■□□□□ 0.02
LDLRAD4-203ENST00000399848 LACTBP83111 547 aaPredicted RBP15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 IL16Q14005 1332 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 IQGAP2Q13576 1575 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 EEF2P13639 858 aaKnown RBP15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 C20orf194Q5TEA3 1177 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 TMX3Q96JJ7 454 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 ASIC1P78348 528 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 CCDC114Q96M63 670 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 IFT74Q96LB3 600 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 C6orf50Q9HD87 102 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 KLF18A0A0U1RQI7 1052 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 B4GALNT4Q76KP1 1039 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 STMN2Q93045 179 aa15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 PCF11O94913 1555 aaKnown RBP15.16■□□□□ 0.02
LDLRAD4-203ENST00000399848 C11orf95C9JLR9 678 aaPredicted RBP15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 NUCB1Q02818 461 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 HDXQ7Z353 690 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 AOPEPQ8N6M6 819 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 FAM76AQ8TAV0 307 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 STK32BQ9NY57 414 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 MTUS1Q9ULD2 1270 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 ATP6V0A2Q9Y487 856 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 TNNC1P63316 161 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 CCDC152Q4G0S7 254 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 ZEB2O60315 1214 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 VPS18Q9P253 973 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 ATP11AP98196 1134 aa15.15■□□□□ 0.02
LDLRAD4-203ENST00000399848 A6NNZ2 444 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 KIF3CO14782 793 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 PLCB3Q01970 1234 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 PPP1R7Q15435 360 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 TUBB8Q3ZCM7 444 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 HEATR3Q7Z4Q2 680 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 USP48Q86UV5 1035 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 UBXN1Q04323 297 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 TAF12Q16514 161 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 GPR161Q8N6U8 529 aaKnown RBP15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 NAIPQ13075 1403 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 ZKSCAN5Q9Y2L8 839 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 HDAC1Q13547 482 aaPredicted RBP15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 ERCC6LQ2NKX8 1250 aa15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 BRDTQ58F21 947 aaPredicted RBP15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 CCDC117Q8IWD4 279 aaPredicted RBP15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 MAK16Q9BXY0 300 aaKnown RBP15.14■□□□□ 0.01
LDLRAD4-203ENST00000399848 SPDYE3A6NKU9 549 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CNGA4Q8IV77 575 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CIB2O75838 187 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CSRNP2Q9H175 543 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 PARP3Q9Y6F1 533 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 FAM184BQ9ULE4 1060 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 ARID5AQ03989 594 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CALM1P0DP23 149 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CALM2P0DP24 149 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CALM3P0DP25 149 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 TRIM75PA6NK02 468 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 TYRO3Q06418 890 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CALCOCO2Q13137 446 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CCDC186Q7Z3E2 898 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 CCDC26Q8TAB7 109 aa15.13■□□□□ 0.01
LDLRAD4-203ENST00000399848 GBP6Q6ZN66 633 aa15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 CCDC94Q9BW85 323 aaPredicted RBP15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 CPSF2Q9P2I0 782 aaKnown RBP15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 PRKAG2Q9UGJ0 569 aa15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 NAPAP54920 295 aa15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 PPFIBP2Q8ND30 876 aa15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 SEC62Q99442 399 aaKnown RBP15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 GPTP24298 496 aa15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 CCDC184Q52MB2 194 aa15.12■□□□□ 0.01
LDLRAD4-203ENST00000399848 NKIRAS1Q9NYS0 192 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms