RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RIMBP2O15034 1052 aa21.87■■□□□ 1.09
CTNS-203ENST00000399306 SURF6O75683 361 aaKnown RBP21.87■■□□□ 1.09
CTNS-203ENST00000399306 IFIT1P09914 478 aaKnown RBP21.87■■□□□ 1.09
CTNS-203ENST00000399306 TNIP1Q15025 636 aa21.87■■□□□ 1.09
CTNS-203ENST00000399306 DCAF8Q5TAQ9 597 aa21.87■■□□□ 1.09
CTNS-203ENST00000399306 WTIPA6NIX2 430 aaPredicted RBP21.86■■□□□ 1.09
CTNS-203ENST00000399306 ECE2O60344 883 aa21.86■■□□□ 1.09
CTNS-203ENST00000399306 ZNF804AQ7Z570 1209 aa21.86■■□□□ 1.09
CTNS-203ENST00000399306 L3MBTL3Q96JM7 780 aaPredicted RBP21.86■■□□□ 1.09
CTNS-203ENST00000399306 GPR101Q96P66 508 aaPredicted RBP21.86■■□□□ 1.09
CTNS-203ENST00000399306 ZNF609O15014 1411 aa21.86■■□□□ 1.09
CTNS-203ENST00000399306 WDR90Q96KV7 1748 aa21.86■■□□□ 1.09
CTNS-203ENST00000399306 YDJCA8MPS7 323 aa21.85■■□□□ 1.09
CTNS-203ENST00000399306 CENPBP07199 599 aaPredicted RBP21.85■■□□□ 1.09
CTNS-203ENST00000399306 SLC5A1P13866 664 aa21.85■■□□□ 1.09
CTNS-203ENST00000399306 TXNRD3Q86VQ6 643 aa21.85■■□□□ 1.09
CTNS-203ENST00000399306 DBNDD1Q9H9R9 158 aa21.85■■□□□ 1.09
CTNS-203ENST00000399306 ARAP2Q8WZ64 1704 aa21.84■■□□□ 1.09
CTNS-203ENST00000399306 RAB11FIP3O75154 756 aa21.84■■□□□ 1.09
CTNS-203ENST00000399306 IL1R1P14778 569 aa21.84■■□□□ 1.09
CTNS-203ENST00000399306 CXCL9Q07325 125 aa21.84■■□□□ 1.09
CTNS-203ENST00000399306 ATP2B3Q16720 1220 aa21.84■■□□□ 1.09
CTNS-203ENST00000399306 CAVIN4Q5BKX8 364 aa21.84■■□□□ 1.09
CTNS-203ENST00000399306 CIAPIN1Q6FI81 312 aa21.84■■□□□ 1.09
CTNS-203ENST00000399306 ZNF541Q9H0D2 1346 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 SCN9AQ15858 1988 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 SCN4AP35499 1836 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 SNAP23O00161 211 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 SASH1O94885 1247 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 DOK7Q18PE1 504 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 FBXO33Q7Z6M2 555 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 FAM84BQ96KN1 310 aaPredicted RBP21.83■■□□□ 1.09
CTNS-203ENST00000399306 CD209Q9NNX6 404 aa21.83■■□□□ 1.09
CTNS-203ENST00000399306 VIL1P09327 827 aaKnown RBP21.82■■□□□ 1.08
CTNS-203ENST00000399306 KLRK1P26718 216 aa21.82■■□□□ 1.08
CTNS-203ENST00000399306 HIBADHP31937 336 aaKnown RBP21.82■■□□□ 1.08
CTNS-203ENST00000399306 TFCP2Q12800 502 aa21.82■■□□□ 1.08
CTNS-203ENST00000399306 OS9Q13438 667 aaPredicted RBP21.82■■□□□ 1.08
CTNS-203ENST00000399306 ZNF784Q8NCA9 323 aaPredicted RBP21.82■■□□□ 1.08
CTNS-203ENST00000399306 RPS12P25398 132 aaKnown RBP21.81■■□□□ 1.08
CTNS-203ENST00000399306 MMP14P50281 582 aa21.81■■□□□ 1.08
CTNS-203ENST00000399306 STRIP1Q5VSL9 837 aa21.81■■□□□ 1.08
CTNS-203ENST00000399306 PCDHB15Q9Y5E8 787 aa21.81■■□□□ 1.08
CTNS-203ENST00000399306 USP17L3A6NCW0 530 aa21.8■■□□□ 1.08
CTNS-203ENST00000399306 USP17L4A6NCW7 530 aa21.8■■□□□ 1.08
CTNS-203ENST00000399306 DDNO94850 711 aaPredicted RBP21.8■■□□□ 1.08
CTNS-203ENST00000399306 FKBP1AP62942 108 aaKnown RBP21.8■■□□□ 1.08
CTNS-203ENST00000399306 USP17L1Q7RTZ2 530 aa21.8■■□□□ 1.08
CTNS-203ENST00000399306 TDRD7Q8NHU6 1098 aaKnown RBP21.8■■□□□ 1.08
CTNS-203ENST00000399306 DPF2Q92785 391 aa21.8■■□□□ 1.08
CTNS-203ENST00000399306 KIF1BPQ96EK5 621 aa21.8■■□□□ 1.08
CTNS-203ENST00000399306 GPBP1L1Q9HC44 474 aaPredicted RBP21.8■■□□□ 1.08
CTNS-203ENST00000399306 MYO3BQ8WXR4 1341 aa21.8■■□□□ 1.08
CTNS-203ENST00000399306 A0A1B0GUL7 405 aa21.79■■□□□ 1.08
CTNS-203ENST00000399306 IQCA1LA6NCM1 817 aa21.79■■□□□ 1.08
CTNS-203ENST00000399306 HDAC1Q13547 482 aaPredicted RBP21.79■■□□□ 1.08
CTNS-203ENST00000399306 DCTPP1Q9H773 170 aa21.79■■□□□ 1.08
CTNS-203ENST00000399306 FAM205AQ6ZU69 1335 aa21.79■■□□□ 1.08
CTNS-203ENST00000399306 ZNF646O15015 1829 aaPredicted RBP21.78■■□□□ 1.08
CTNS-203ENST00000399306 PSMD14O00487 310 aa21.78■■□□□ 1.08
CTNS-203ENST00000399306 SEMA3EO15041 775 aa21.78■■□□□ 1.08
CTNS-203ENST00000399306 RAD17O75943 681 aa21.78■■□□□ 1.08
CTNS-203ENST00000399306 VEGFAP15692 232 aaPredicted RBP21.78■■□□□ 1.08
CTNS-203ENST00000399306 VPS37DQ86XT2 251 aa21.78■■□□□ 1.08
CTNS-203ENST00000399306 AGBL3Q8NEM8 1001 aa21.78■■□□□ 1.08
CTNS-203ENST00000399306 EXOC6Q8TAG9 804 aa21.78■■□□□ 1.08
CTNS-203ENST00000399306 EXOC6BQ9Y2D4 811 aa21.78■■□□□ 1.08
CTNS-203ENST00000399306 GYG1P46976 350 aa21.77■■□□□ 1.08
CTNS-203ENST00000399306 TNNI3KQ59H18 835 aa21.77■■□□□ 1.08
CTNS-203ENST00000399306 RHPN1Q8TCX5 695 aa21.77■■□□□ 1.08
CTNS-203ENST00000399306 GNL3LQ9NVN8 582 aaKnown RBP21.77■■□□□ 1.08
CTNS-203ENST00000399306 FPGT-TNNI3KV9GXZ4 949 aa21.77■■□□□ 1.08
CTNS-203ENST00000399306 TIMM10P62072 90 aa21.76■■□□□ 1.07
CTNS-203ENST00000399306 DACT2Q5SW24 774 aa21.76■■□□□ 1.07
CTNS-203ENST00000399306 TTLL5Q6EMB2 1281 aa21.76■■□□□ 1.07
CTNS-203ENST00000399306 RSBN1LQ6PCB5 846 aaPredicted RBP21.76■■□□□ 1.07
CTNS-203ENST00000399306 GJA3Q9Y6H8 435 aa21.76■■□□□ 1.07
CTNS-203ENST00000399306 POTECB2RU33 542 aa21.75■■□□□ 1.07
CTNS-203ENST00000399306 BCAMP50895 628 aa21.75■■□□□ 1.07
CTNS-203ENST00000399306 XAGE2Q96GT9 111 aa21.75■■□□□ 1.07
CTNS-203ENST00000399306 GMLQ99445 158 aa21.75■■□□□ 1.07
CTNS-203ENST00000399306 KCNQ5Q9NR82 932 aa21.75■■□□□ 1.07
CTNS-203ENST00000399306 PDS5AQ29RF7 1337 aaKnown RBP21.75■■□□□ 1.07
CTNS-203ENST00000399306 MYH13Q9UKX3 1938 aa21.74■■□□□ 1.07
CTNS-203ENST00000399306 LMOD1P29536 600 aaPredicted RBP21.74■■□□□ 1.07
CTNS-203ENST00000399306 SCNN1DP51172 638 aa21.74■■□□□ 1.07
CTNS-203ENST00000399306 CLASRPQ8N2M8 674 aaKnown RBP21.74■■□□□ 1.07
CTNS-203ENST00000399306 TBC1D22AQ8WUA7 517 aa21.74■■□□□ 1.07
CTNS-203ENST00000399306 GPRC5DQ9NZD1 345 aa21.74■■□□□ 1.07
CTNS-203ENST00000399306 HACL1Q9UJ83 578 aa21.74■■□□□ 1.07
CTNS-203ENST00000399306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.74■■□□□ 1.07
CTNS-203ENST00000399306 GMPSP49915 693 aaPredicted RBP21.73■■□□□ 1.07
CTNS-203ENST00000399306 GTF2IP78347 998 aa21.73■■□□□ 1.07
CTNS-203ENST00000399306 CCDC102BQ68D86 513 aa21.73■■□□□ 1.07
CTNS-203ENST00000399306 GCC1Q96CN9 775 aa21.73■■□□□ 1.07
CTNS-203ENST00000399306 ZNF512BQ96KM6 892 aaPredicted RBP21.73■■□□□ 1.07
CTNS-203ENST00000399306 NEUROD6Q96NK8 337 aa21.72■■□□□ 1.07
CTNS-203ENST00000399306 LRRCC1Q9C099 1032 aa21.72■■□□□ 1.07
CTNS-203ENST00000399306 RWDD1Q9H446 243 aaPredicted RBP21.72■■□□□ 1.07
CTNS-203ENST00000399306 RRAGCQ9HB90 399 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms