RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 ARHGAP27Q6ZUM4 889 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 ATG9AQ7Z3C6 839 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 AACSQ86V21 672 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 SUPT20HQ8NEM7 779 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 GPATCH3Q96I76 525 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 EYA3Q99504 573 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
BRCC3-206ENST00000399042 PDE8BO95263 885 aa10.96□□□□□ -0.65
BRCC3-206ENST00000399042 CAVIN4Q5BKX8 364 aa10.96□□□□□ -0.65
BRCC3-206ENST00000399042 OLFM4Q6UX06 510 aa10.96□□□□□ -0.65
BRCC3-206ENST00000399042 LPIN2Q92539 896 aa10.96□□□□□ -0.65
BRCC3-206ENST00000399042 ZC3H12CQ9C0D7 883 aaKnown RBP10.96□□□□□ -0.65
BRCC3-206ENST00000399042 LNPKQ9C0E8 428 aa10.96□□□□□ -0.65
BRCC3-206ENST00000399042 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.65
BRCC3-206ENST00000399042 NRXN2Q9P2S2 1712 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 TNRC6CQ9HCJ0 1690 aaKnown RBP10.95□□□□□ -0.66
BRCC3-206ENST00000399042 ZNF804BA4D1E1 1349 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 SASH1O94885 1247 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 TIMM10P62072 90 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 UBE4AQ14139 1066 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 CCDC158Q5M9N0 1113 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 CHD1LQ86WJ1 897 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 SMC5Q8IY18 1101 aa10.95□□□□□ -0.66
BRCC3-206ENST00000399042 CCDC8Q9H0W5 538 aaPredicted RBP10.95□□□□□ -0.66
BRCC3-206ENST00000399042 GNL3LQ9NVN8 582 aaKnown RBP10.95□□□□□ -0.66
BRCC3-206ENST00000399042 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
BRCC3-206ENST00000399042 A0A1B0GUL7 405 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 NUCB1Q02818 461 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 TNNI3KQ59H18 835 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 TTC39AQ5SRH9 613 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 TBC1D16Q8TBP0 767 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 TAOK3Q9H2K8 898 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 FPGT-TNNI3KV9GXZ4 949 aa10.94□□□□□ -0.66
BRCC3-206ENST00000399042 SNAP23O00161 211 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 PPIP5K2O43314 1243 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 GRIN3BO60391 1043 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 ZNF804AQ7Z570 1209 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 LARGE2Q8N3Y3 721 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 XAGE2Q96GT9 111 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 GPR101Q96P66 508 aaPredicted RBP10.93□□□□□ -0.66
BRCC3-206ENST00000399042 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
BRCC3-206ENST00000399042 GPR108Q9NPR9 543 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 PODXL2Q9NZ53 605 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 LAMB2P55268 1798 aa10.93□□□□□ -0.66
BRCC3-206ENST00000399042 HIBADHP31937 336 aaKnown RBP10.92□□□□□ -0.66
BRCC3-206ENST00000399042 RGS3P49796 1198 aa10.92□□□□□ -0.66
BRCC3-206ENST00000399042 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
BRCC3-206ENST00000399042 C7orf43Q8WVR3 580 aa10.92□□□□□ -0.66
BRCC3-206ENST00000399042 JDP2Q8WYK2 163 aa10.92□□□□□ -0.66
BRCC3-206ENST00000399042 EAF2Q96CJ1 260 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-206ENST00000399042 ZNF277Q9NRM2 450 aaPredicted RBP10.92□□□□□ -0.66
BRCC3-206ENST00000399042 POLLQ9UGP5 575 aa10.92□□□□□ -0.66
BRCC3-206ENST00000399042 MYH3P11055 1940 aa10.92□□□□□ -0.66
BRCC3-206ENST00000399042 ANKRD31Q8N7Z5 1873 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 KDM2BQ8NHM5 1336 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 ERC2O15083 957 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 ADORA1P30542 326 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 GYG1P46976 350 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 BCAMP50895 628 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 DOK7Q18PE1 504 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 C16orf71Q8IYS4 520 aaPredicted RBP10.91□□□□□ -0.66
BRCC3-206ENST00000399042 VGLL2Q8N8G2 317 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 DBNDD2Q9BQY9 259 aa10.91□□□□□ -0.66
BRCC3-206ENST00000399042 WTIPA6NIX2 430 aaPredicted RBP10.9□□□□□ -0.66
BRCC3-206ENST00000399042 UQCRFS1P1P0C7P4 283 aa10.9□□□□□ -0.66
BRCC3-206ENST00000399042 MX1P20591 662 aa10.9□□□□□ -0.66
BRCC3-206ENST00000399042 CHAF1AQ13111 956 aaPredicted RBP10.9□□□□□ -0.66
BRCC3-206ENST00000399042 AOC3Q16853 763 aa10.9□□□□□ -0.66
BRCC3-206ENST00000399042 NIM1KQ8IY84 436 aa10.9□□□□□ -0.66
BRCC3-206ENST00000399042 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
BRCC3-206ENST00000399042 PSMD1Q99460 953 aa10.9□□□□□ -0.66
BRCC3-206ENST00000399042 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.66
BRCC3-206ENST00000399042 IQSEC3Q9UPP2 1182 aaPredicted RBP10.9□□□□□ -0.66
BRCC3-206ENST00000399042 YBX3P16989 372 aaKnown RBP eCLIP10.89□□□□□ -0.67
BRCC3-206ENST00000399042 FGFR2P21802 821 aa10.89□□□□□ -0.67
BRCC3-206ENST00000399042 KLRK1P26718 216 aa10.89□□□□□ -0.67
BRCC3-206ENST00000399042 IARSP41252 1262 aaKnown RBP10.89□□□□□ -0.67
BRCC3-206ENST00000399042 RASSF7Q02833 373 aa10.89□□□□□ -0.67
BRCC3-206ENST00000399042 CCDC102BQ68D86 513 aa10.89□□□□□ -0.67
BRCC3-206ENST00000399042 SP7Q8TDD2 431 aaPredicted RBP10.89□□□□□ -0.67
BRCC3-206ENST00000399042 DNAJC2Q99543 621 aaKnown RBP10.89□□□□□ -0.67
BRCC3-206ENST00000399042 COA1Q9GZY4 146 aa10.89□□□□□ -0.67
BRCC3-206ENST00000399042 TLR7Q9NYK1 1049 aaKnown RBP10.89□□□□□ -0.67
BRCC3-206ENST00000399042 DBNLQ9UJU6 430 aaKnown RBP10.89□□□□□ -0.67
BRCC3-206ENST00000399042 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.89□□□□□ -0.67
BRCC3-206ENST00000399042 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
BRCC3-206ENST00000399042 COL11A2P13942 1736 aaPredicted RBP10.88□□□□□ -0.67
BRCC3-206ENST00000399042 PHKA1P46020 1223 aa10.88□□□□□ -0.67
BRCC3-206ENST00000399042 KIAA2012Q0VF49 1180 aa10.88□□□□□ -0.67
BRCC3-206ENST00000399042 TSHZ3Q63HK5 1081 aa10.88□□□□□ -0.67
BRCC3-206ENST00000399042 OTUD7AQ8TE49 926 aaPredicted RBP10.88□□□□□ -0.67
BRCC3-206ENST00000399042 FAM84BQ96KN1 310 aaPredicted RBP10.88□□□□□ -0.67
BRCC3-206ENST00000399042 RTFDC1Q9BY42 306 aaPredicted RBP10.88□□□□□ -0.67
BRCC3-206ENST00000399042 VPS33BQ9H267 617 aa10.88□□□□□ -0.67
BRCC3-206ENST00000399042 BOLA2Q9H3K6 86 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms