RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TDRD7Q8NHU6 1098 aaKnown RBP7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 GRPEL1Q9HAV7 217 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 AKAP2Q9Y2D5 859 aa7.71□□□□□ -1.18
TM9SF4-202ENST00000398022 PPP2R5AQ15172 486 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 XBP1P17861 261 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 RXRBP28702 533 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 TBX4P57082 545 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 ANKRD45Q5TZF3 282 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 TRIM74Q86UV6 250 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 TRIM73Q86UV7 250 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 LCA5Q86VQ0 697 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 MYO1HQ8N1T3 1032 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 TRIM35Q9UPQ4 493 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 A0A1W2PP64 1363 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 ATP7BP35670 1465 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 KCTD2Q14681 263 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 EGFLAMQ63HQ2 1017 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 ELOA2Q8IYF1 753 aaPredicted RBP7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 PLEKHF1Q96S99 279 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 USP25Q9UHP3 1055 aa7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 YTHDC2Q9H6S0 1430 aaKnown RBP7.7□□□□□ -1.18
TM9SF4-202ENST00000398022 TNPO1Q92973 898 aaKnown RBP7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 TNS3Q68CZ2 1445 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 CARNS1A5YM72 827 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 PABPN1LA6NDY0 278 aaKnown RBP7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 MTA2O94776 668 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 LDHCP07864 332 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 ZNF132P52740 706 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 RBM6P78332 1123 aaKnown RBP7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 CCDC91Q7Z6B0 441 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 FILIP1Q7Z7B0 1213 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 NT5DC4Q86YG4 428 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 CHCHD4Q8N4Q1 142 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 RAD50Q92878 1312 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 MON2Q7Z3U7 1717 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 PDE6BP35913 854 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 GNAI1P63096 354 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 ARHGAP45Q92619 1136 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 ZHX3Q9H4I2 956 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 PCDHGA4Q9Y5G9 962 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 WASHC5Q12768 1159 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 NGDNQ8NEJ9 315 aaKnown RBP7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 BHMTQ93088 406 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 CCDC34Q96HJ3 373 aa7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 ZNF512BQ96KM6 892 aaPredicted RBP7.69□□□□□ -1.18
TM9SF4-202ENST00000398022 SLIT3O75094 1523 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 MINK1Q8N4C8 1332 aaPredicted RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 K7ELQ4 463 aaPredicted RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 IBSPP21815 317 aaPredicted RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 MAN1A1P33908 653 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 CDC37L1Q7L3B6 337 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 SLF2Q8IX21 1173 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 STAG2Q8N3U4 1231 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 LRRC59Q96AG4 307 aaKnown RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 API5Q9BZZ5 524 aaKnown RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 TMEM63CQ9P1W3 806 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 MKRN1Q9UHC7 482 aaKnown RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 ANKARQ7Z5J8 1434 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 FYB1O15117 783 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 CDC45O75419 566 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 MPP4Q96JB8 637 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 DUSP9Q99956 384 aaKnown RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 SPC25Q9HBM1 224 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 TMOD4Q9NZQ9 345 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 RABL2AQ9UBK7 228 aaPredicted RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 ITM2BQ9Y287 266 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 CEP350Q5VT06 3117 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 CHAF1AQ13111 956 aaPredicted RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 MCM6Q14566 821 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 MAP9Q49MG5 647 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 NOP9Q86U38 636 aaKnown RBP7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 SLX1AQ9BQ83 275 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 ETAA1Q9NY74 926 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 TMCC3Q9ULS5 477 aa7.68□□□□□ -1.18
TM9SF4-202ENST00000398022 SBNO1A3KN83 1393 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 SPATA31A3Q5VYP0 1347 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 GTPBP6O43824 516 aaPredicted RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 KINO60870 393 aaKnown RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 PRKAR2BP31323 418 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 STIP1P31948 543 aaKnown RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 CLK1P49759 484 aaKnown RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 NKX1-1Q15270 411 aaPredicted RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 MMTAG2Q9BU76 263 aaKnown RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 PANK2Q9BZ23 570 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 PLSCR2Q9NRY7 297 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 TBC1D2BQ9UPU7 963 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 DYTNA2CJ06 578 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 MECOMQ03112 1051 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 RAB3GAP1Q15042 981 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 LONRF1Q17RB8 773 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 ANKRD13DQ6ZTN6 518 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 IL17RAQ96F46 866 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 DEF6Q9H4E7 631 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 TCEAL9Q9UHQ7 104 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 TLDC2A0PJX2 215 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 ZNF16P17020 682 aaPredicted RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 RRM1P23921 792 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 MSNP26038 577 aaKnown RBP7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 NFE2L2Q16236 605 aa7.67□□□□□ -1.18
TM9SF4-202ENST00000398022 MSL1Q68DK7 614 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms