RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
CXCL12-205ENST00000395794 LDHAL6AQ6ZMR3 332 aa17.33■□□□□ 0.36
CXCL12-205ENST00000395794 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
CXCL12-205ENST00000395794 CNNM1Q9NRU3 951 aa17.33■□□□□ 0.36
CXCL12-205ENST00000395794 U3KPZ7 1027 aaPredicted RBP17.33■□□□□ 0.36
CXCL12-205ENST00000395794 CELF2O95319 508 aaKnown RBP17.32■□□□□ 0.36
CXCL12-205ENST00000395794 HSPA1AP0DMV8 641 aaKnown RBP17.32■□□□□ 0.36
CXCL12-205ENST00000395794 HSPA1BP0DMV9 641 aaKnown RBP17.32■□□□□ 0.36
CXCL12-205ENST00000395794 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.36
CXCL12-205ENST00000395794 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
CXCL12-205ENST00000395794 USP48Q86UV5 1035 aa17.32■□□□□ 0.36
CXCL12-205ENST00000395794 TRMT2AQ8IZ69 625 aaKnown RBP17.32■□□□□ 0.36
CXCL12-205ENST00000395794 ZNF408Q9H9D4 720 aa17.32■□□□□ 0.36
CXCL12-205ENST00000395794 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
CXCL12-205ENST00000395794 ECE1P42892 770 aa17.31■□□□□ 0.36
CXCL12-205ENST00000395794 CST9Q5W186 159 aa17.31■□□□□ 0.36
CXCL12-205ENST00000395794 DIEXFQ68CQ4 756 aaKnown RBP17.31■□□□□ 0.36
CXCL12-205ENST00000395794 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
CXCL12-205ENST00000395794 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
CXCL12-205ENST00000395794 MYO3BQ8WXR4 1341 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 PLIN1O60240 522 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 TAF5LO75529 589 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 ZNF280AP59817 542 aaPredicted RBP17.3■□□□□ 0.36
CXCL12-205ENST00000395794 STRIP1Q5VSL9 837 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 SULF1Q8IWU6 871 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
CXCL12-205ENST00000395794 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 SUCLG2Q96I99 432 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
CXCL12-205ENST00000395794 SPEF2Q9C093 1822 aa17.3■□□□□ 0.36
CXCL12-205ENST00000395794 UTYO14607 1347 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
CXCL12-205ENST00000395794 EGFRP00533 1210 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 GRM1Q13255 1194 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 TTLL5Q6EMB2 1281 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 TXNRD3Q86VQ6 643 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 MYOZ2Q9NPC6 264 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 TLL2Q9Y6L7 1015 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 ZNF609O15014 1411 aa17.29■□□□□ 0.36
CXCL12-205ENST00000395794 CAPN15O75808 1086 aa17.28■□□□□ 0.36
CXCL12-205ENST00000395794 MMP14P50281 582 aa17.28■□□□□ 0.36
CXCL12-205ENST00000395794 DACT2Q5SW24 774 aa17.28■□□□□ 0.36
CXCL12-205ENST00000395794 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
CXCL12-205ENST00000395794 GMLQ99445 158 aa17.28■□□□□ 0.36
CXCL12-205ENST00000395794 KLRK1P26718 216 aa17.27■□□□□ 0.36
CXCL12-205ENST00000395794 SCARF1Q14162 830 aa17.27■□□□□ 0.36
CXCL12-205ENST00000395794 CAPNS2Q96L46 248 aa17.27■□□□□ 0.36
CXCL12-205ENST00000395794 BICC1Q9H694 974 aaKnown RBP17.27■□□□□ 0.36
CXCL12-205ENST00000395794 CD209Q9NNX6 404 aa17.27■□□□□ 0.36
CXCL12-205ENST00000395794 GGA3Q9NZ52 723 aa17.27■□□□□ 0.36
CXCL12-205ENST00000395794 HDAC9Q9UKV0 1011 aa17.27■□□□□ 0.36
CXCL12-205ENST00000395794 GTF2IP78347 998 aa17.26■□□□□ 0.35
CXCL12-205ENST00000395794 MAP2K1Q02750 393 aaPredicted RBP17.26■□□□□ 0.35
CXCL12-205ENST00000395794 ANGEL2Q5VTE6 544 aaKnown RBP17.26■□□□□ 0.35
CXCL12-205ENST00000395794 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
CXCL12-205ENST00000395794 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
CXCL12-205ENST00000395794 MIER1Q8N108 512 aa17.26■□□□□ 0.35
CXCL12-205ENST00000395794 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
CXCL12-205ENST00000395794 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
CXCL12-205ENST00000395794 NOB1Q9ULX3 412 aaKnown RBP17.26■□□□□ 0.35
CXCL12-205ENST00000395794 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 SNAP23O00161 211 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 RABL6Q3YEC7 729 aaPredicted RBP17.25■□□□□ 0.35
CXCL12-205ENST00000395794 IFFO2Q5TF58 517 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 C2orf69Q8N8R5 385 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 HHIPL1Q96JK4 782 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 BEGAINQ9BUH8 593 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 USP44Q9H0E7 712 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 SCN9AQ15858 1988 aa17.25■□□□□ 0.35
CXCL12-205ENST00000395794 MROH5Q6ZUA9 1318 aa17.24■□□□□ 0.35
CXCL12-205ENST00000395794 DSG3P32926 999 aa17.24■□□□□ 0.35
CXCL12-205ENST00000395794 POTEHQ6S545 545 aa17.24■□□□□ 0.35
CXCL12-205ENST00000395794 BRPF1P55201 1214 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-205ENST00000395794 HUNKP57058 714 aa17.23■□□□□ 0.35
CXCL12-205ENST00000395794 UBE4AQ14139 1066 aa17.23■□□□□ 0.35
CXCL12-205ENST00000395794 KIAA0825Q8IV33 1275 aa17.23■□□□□ 0.35
CXCL12-205ENST00000395794 GBA2Q9HCG7 927 aaPredicted RBP17.23■□□□□ 0.35
CXCL12-205ENST00000395794 PCNTO95613 3336 aa17.23■□□□□ 0.35
CXCL12-205ENST00000395794 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 PITPNM2Q9BZ72 1349 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 TRPM7Q96QT4 1865 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-205ENST00000395794 IL1R1P14778 569 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 MAP2K2P36507 400 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 CTCFP49711 727 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-205ENST00000395794 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
CXCL12-205ENST00000395794 HNRNPUQ00839 825 aaKnown RBP eCLIP17.22■□□□□ 0.35
CXCL12-205ENST00000395794 METTL24Q5JXM2 366 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 COL13A1Q5TAT6 717 aaPredicted RBP17.22■□□□□ 0.35
CXCL12-205ENST00000395794 DLK2Q6UY11 383 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 PUS3Q9BZE2 481 aaKnown RBP17.22■□□□□ 0.35
CXCL12-205ENST00000395794 WBP1LQ9NX94 342 aa17.22■□□□□ 0.35
CXCL12-205ENST00000395794 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.35
CXCL12-205ENST00000395794 IPO8O15397 1037 aaKnown RBP17.21■□□□□ 0.35
CXCL12-205ENST00000395794 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
CXCL12-205ENST00000395794 VPS37DQ86XT2 251 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms