RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 STYK1Q6J9G0 422 aa29.73■■■□□ 2.35
CTF1-202ENST00000395019 GRAPLQ8TC17 118 aaPredicted RBP29.73■■■□□ 2.35
CTF1-202ENST00000395019 RUFY2Q8WXA3 655 aa29.73■■■□□ 2.35
CTF1-202ENST00000395019 CRAMP1Q96RY5 1269 aa29.72■■■□□ 2.35
CTF1-202ENST00000395019 KIF2CQ99661 725 aa29.72■■■□□ 2.35
CTF1-202ENST00000395019 LRRC37AA6NMS7 1700 aa29.72■■■□□ 2.35
CTF1-202ENST00000395019 GORABQ5T7V8 394 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 SYT17Q9BSW7 474 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 FSD1Q9BTV5 496 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 RFX7Q2KHR2 1363 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 UTRNP46939 3433 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 FGFR2P21802 821 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 PUM3Q15397 648 aaKnown RBP29.71■■■□□ 2.35
CTF1-202ENST00000395019 ANKRD18AQ8IVF6 992 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 IL25Q9H293 177 aa29.71■■■□□ 2.35
CTF1-202ENST00000395019 IFIT1P09914 478 aaKnown RBP29.7■■■□□ 2.34
CTF1-202ENST00000395019 RPS8P62241 208 aaKnown RBP29.7■■■□□ 2.34
CTF1-202ENST00000395019 LPIN2Q92539 896 aa29.7■■■□□ 2.34
CTF1-202ENST00000395019 DNAJC2Q99543 621 aaKnown RBP29.7■■■□□ 2.34
CTF1-202ENST00000395019 BECN1Q14457 450 aa29.69■■■□□ 2.34
CTF1-202ENST00000395019 TTC39AQ5SRH9 613 aa29.69■■■□□ 2.34
CTF1-202ENST00000395019 CWC27Q6UX04 472 aaKnown RBP29.69■■■□□ 2.34
CTF1-202ENST00000395019 OLFM4Q6UX06 510 aa29.69■■■□□ 2.34
CTF1-202ENST00000395019 TICAM2Q86XR7 235 aa29.69■■■□□ 2.34
CTF1-202ENST00000395019 EDC3Q96F86 508 aaKnown RBP29.69■■■□□ 2.34
CTF1-202ENST00000395019 ANO2Q9NQ90 1003 aa29.69■■■□□ 2.34
CTF1-202ENST00000395019 PRPF40BQ6NWY9 871 aaKnown RBP29.68■■■□□ 2.34
CTF1-202ENST00000395019 BSDC1Q9NW68 430 aaPredicted RBP29.68■■■□□ 2.34
CTF1-202ENST00000395019 ZNF512BQ96KM6 892 aaPredicted RBP29.67■■■□□ 2.34
CTF1-202ENST00000395019 HELBQ8NG08 1087 aaPredicted RBP29.67■■■□□ 2.34
CTF1-202ENST00000395019 PAG1Q9NWQ8 432 aa29.67■■■□□ 2.34
CTF1-202ENST00000395019 DAXXQ9UER7 740 aaPredicted RBP29.67■■■□□ 2.34
CTF1-202ENST00000395019 ALDH1B1P30837 517 aa29.66■■■□□ 2.34
CTF1-202ENST00000395019 KBTBD3Q8NAB2 608 aa29.66■■■□□ 2.34
CTF1-202ENST00000395019 NDUFB9Q9Y6M9 179 aa29.66■■■□□ 2.34
CTF1-202ENST00000395019 RAD50Q92878 1312 aa29.66■■■□□ 2.34
CTF1-202ENST00000395019 PPEF1O14829 653 aaPredicted RBP29.65■■■□□ 2.34
CTF1-202ENST00000395019 SLC5A1P13866 664 aa29.65■■■□□ 2.34
CTF1-202ENST00000395019 CHRNDQ07001 517 aa29.65■■■□□ 2.34
CTF1-202ENST00000395019 CNKSR1Q969H4 720 aa29.65■■■□□ 2.34
CTF1-202ENST00000395019 SNRKQ9NRH2 765 aa29.65■■■□□ 2.34
CTF1-202ENST00000395019 ZNF219Q9P2Y4 722 aaPredicted RBP29.65■■■□□ 2.34
CTF1-202ENST00000395019 ARFGEF1Q9Y6D6 1849 aa29.65■■■□□ 2.34
CTF1-202ENST00000395019 LTBP1Q14766 1721 aa29.65■■■□□ 2.34
CTF1-202ENST00000395019 ARAP2Q8WZ64 1704 aa29.65■■■□□ 2.34
CTF1-202ENST00000395019 NMIQ13287 307 aaPredicted RBP29.64■■■□□ 2.34
CTF1-202ENST00000395019 TTLL6Q8N841 843 aa29.64■■■□□ 2.34
CTF1-202ENST00000395019 PIM2Q9P1W9 311 aa29.64■■■□□ 2.34
CTF1-202ENST00000395019 GOLIM4O00461 696 aa29.63■■■□□ 2.33
CTF1-202ENST00000395019 MCCP23508 829 aa29.63■■■□□ 2.33
CTF1-202ENST00000395019 TAF5LO75529 589 aa29.63■■■□□ 2.33
CTF1-202ENST00000395019 BBOX1O75936 387 aa29.63■■■□□ 2.33
CTF1-202ENST00000395019 FAM227BQ96M60 508 aa29.63■■■□□ 2.33
CTF1-202ENST00000395019 LSG1Q9H089 658 aaKnown RBP29.63■■■□□ 2.33
CTF1-202ENST00000395019 KIAA1211Q6ZU35 1233 aa29.62■■■□□ 2.33
CTF1-202ENST00000395019 C7orf43Q8WVR3 580 aa29.61■■■□□ 2.33
CTF1-202ENST00000395019 SNX21Q969T3 373 aa29.61■■■□□ 2.33
CTF1-202ENST00000395019 TBC1D2Q9BYX2 928 aa29.61■■■□□ 2.33
CTF1-202ENST00000395019 MINPP1Q9UNW1 487 aa29.61■■■□□ 2.33
CTF1-202ENST00000395019 WTIPA6NIX2 430 aaPredicted RBP29.6■■■□□ 2.33
CTF1-202ENST00000395019 SLC4A3P48751 1232 aa29.6■■■□□ 2.33
CTF1-202ENST00000395019 RABEP1Q15276 862 aa29.6■■■□□ 2.33
CTF1-202ENST00000395019 CCDC102BQ68D86 513 aa29.6■■■□□ 2.33
CTF1-202ENST00000395019 A0A0D9SFI3 127 aa29.6■■■□□ 2.33
CTF1-202ENST00000395019 UQCRFS1P1P0C7P4 283 aa29.6■■■□□ 2.33
CTF1-202ENST00000395019 SCARF1Q14162 830 aa29.6■■■□□ 2.33
CTF1-202ENST00000395019 ATP6V0A2Q9Y487 856 aa29.6■■■□□ 2.33
CTF1-202ENST00000395019 C21orf2O43822 256 aa29.59■■■□□ 2.33
CTF1-202ENST00000395019 ARID4AP29374 1257 aaPredicted RBP29.59■■■□□ 2.33
CTF1-202ENST00000395019 ANAPC15P60006 121 aa29.59■■■□□ 2.33
CTF1-202ENST00000395019 DALRD3Q5D0E6 543 aaKnown RBP29.59■■■□□ 2.33
CTF1-202ENST00000395019 IL17RAQ96F46 866 aa29.59■■■□□ 2.33
CTF1-202ENST00000395019 DUOX1Q9NRD9 1551 aa29.59■■■□□ 2.33
CTF1-202ENST00000395019 SNED1Q8TER0 1413 aa29.58■■■□□ 2.33
CTF1-202ENST00000395019 MED23Q9ULK4 1368 aa29.58■■■□□ 2.33
CTF1-202ENST00000395019 SNAP23O00161 211 aa29.58■■■□□ 2.33
CTF1-202ENST00000395019 PHKA1P46020 1223 aa29.58■■■□□ 2.33
CTF1-202ENST00000395019 FKBP4Q02790 459 aaKnown RBP eCLIP29.58■■■□□ 2.33
CTF1-202ENST00000395019 HSPA4P34932 840 aa29.57■■■□□ 2.32
CTF1-202ENST00000395019 MCAMP43121 646 aa29.57■■■□□ 2.32
CTF1-202ENST00000395019 BCS1LQ9Y276 419 aa29.57■■■□□ 2.32
CTF1-202ENST00000395019 FER1L6Q2WGJ9 1857 aa29.57■■■□□ 2.32
CTF1-202ENST00000395019 ZAP70P43403 619 aa29.56■■■□□ 2.32
CTF1-202ENST00000395019 UBE4AQ14139 1066 aa29.56■■■□□ 2.32
CTF1-202ENST00000395019 SP8Q8IXZ3 490 aa29.56■■■□□ 2.32
CTF1-202ENST00000395019 ANTXR1Q9H6X2 564 aa29.56■■■□□ 2.32
CTF1-202ENST00000395019 GPSM2P81274 684 aa29.56■■■□□ 2.32
CTF1-202ENST00000395019 LRRFIP1Q32MZ4 808 aaKnown RBP29.55■■■□□ 2.32
CTF1-202ENST00000395019 AKAP11Q9UKA4 1901 aa29.54■■■□□ 2.32
CTF1-202ENST00000395019 CCDC171Q6TFL3 1326 aa29.54■■■□□ 2.32
CTF1-202ENST00000395019 HSCBQ8IWL3 235 aa29.54■■■□□ 2.32
CTF1-202ENST00000395019 ANKRD2Q9GZV1 360 aa29.54■■■□□ 2.32
CTF1-202ENST00000395019 PTH1RQ03431 593 aa29.53■■■□□ 2.32
CTF1-202ENST00000395019 TMC4Q7Z404 712 aa29.53■■■□□ 2.32
CTF1-202ENST00000395019 MCMDC2Q4G0Z9 681 aa29.53■■■□□ 2.32
CTF1-202ENST00000395019 HELLSQ9NRZ9 838 aa29.53■■■□□ 2.32
CTF1-202ENST00000395019 PALD1Q9ULE6 856 aa29.53■■■□□ 2.32
CTF1-202ENST00000395019 RNF113AO15541 343 aaKnown RBP29.52■■■□□ 2.32
CTF1-202ENST00000395019 TTF1Q15361 905 aaPredicted RBP29.52■■■□□ 2.32
CTF1-202ENST00000395019 YBX3P16989 372 aaKnown RBP eCLIP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms