RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 UFL1O94874 794 aa8□□□□□ -1.13
SMARCAD1-203ENST00000394961 CCT4P50991 539 aaKnown RBP8□□□□□ -1.13
SMARCAD1-203ENST00000394961 NSFL1CQ9UNZ2 370 aaKnown RBP8□□□□□ -1.13
SMARCAD1-203ENST00000394961 USP17L8P0C7I0 530 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 CAPN2P17655 700 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 KRT26Q7Z3Y9 468 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 USP48Q86UV5 1035 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 PCDH10Q9P2E7 1040 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 LOC285556D6RIA3 1793 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 CASP8AP2Q9UKL3 1982 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 DDX10Q13206 875 aaKnown RBP7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 ZCCHC17Q9NP64 241 aaKnown RBP7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 INHBEP58166 350 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 STK31Q9BXU1 1019 aa7.99□□□□□ -1.13
SMARCAD1-203ENST00000394961 ATP5J2-PTCD1G3V325 749 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 AOC2O75106 756 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 VAMP4O75379 141 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 FOXO4P98177 505 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 SULF1Q8IWU6 871 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 DBNDD1Q9H9R9 158 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 SEC31BQ9NQW1 1179 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 FANCIQ9NVI1 1328 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 C6orf229H3BNL8 230 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 ZBTB48P10074 688 aaPredicted RBP7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 HDLBPQ00341 1268 aaKnown RBP7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 SCARF1Q14162 830 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 TWISTNBQ3B726 338 aaPredicted RBP7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 MCOLN1Q9GZU1 580 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 RNF186Q9NXI6 227 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 DOCK1Q14185 1865 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 ZEB1P37275 1124 aaPredicted RBP7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 SUGT1Q9Y2Z0 365 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 PTPRFP10586 1907 aa7.98□□□□□ -1.13
SMARCAD1-203ENST00000394961 ALDH1A1P00352 501 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 HUNKP57058 714 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 RABL6Q3YEC7 729 aaPredicted RBP7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 BEND3Q5T5X7 828 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 DNAAF4Q8WXU2 420 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 GGA3Q9NZ52 723 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 PI4KAP2A4QPH2 592 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 FLIIQ13045 1269 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 SAMD7Q7Z3H4 446 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 CTU1Q7Z7A3 348 aaKnown RBP7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 PI4KAP1Q8N8J0 262 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 COL2A1P02458 1487 aaPredicted RBP7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 IGHMBP2P38935 993 aaKnown RBP7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 KIF23Q02241 960 aaPredicted RBP7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 SREBF2Q12772 1141 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 TSPYL6Q8N831 410 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 CSRNP1Q96S65 589 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 GREM2Q9H772 168 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 ZBTB12Q9Y330 459 aaPredicted RBP7.97□□□□□ -1.13
SMARCAD1-203ENST00000394961 IGSF3O75054 1194 aa7.96□□□□□ -1.13
SMARCAD1-203ENST00000394961 EGFRP00533 1210 aa7.96□□□□□ -1.13
SMARCAD1-203ENST00000394961 HDAC9Q9UKV0 1011 aa7.96□□□□□ -1.13
SMARCAD1-203ENST00000394961 ATAD5Q96QE3 1844 aa7.96□□□□□ -1.13
SMARCAD1-203ENST00000394961 ADM5C9JUS6 153 aa7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 FKBP1CQ5VVH2 108 aa7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 ANKIB1Q9P2G1 1089 aa7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 CDK5RAP2Q96SN8 1893 aa7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 UBE4AQ14139 1066 aa7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 TBC1D10BQ4KMP7 808 aaPredicted RBP7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 PTPRCP08575 1304 aa7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 PDS5AQ29RF7 1337 aaKnown RBP7.96□□□□□ -1.14
SMARCAD1-203ENST00000394961 CT47B1P0C2W7 299 aaPredicted RBP7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 MLLT1Q03111 559 aaPredicted RBP7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 KCNQ5Q9NR82 932 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 GOLGB1Q14789 3259 aaKnown RBP7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 ANKRD18BA2A2Z9 1011 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 MANSC4A6NHS7 340 aaPredicted RBP7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 WNT10BO00744 389 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 DOK7Q18PE1 504 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 ANGEL2Q5VTE6 544 aaKnown RBP7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 LAS1LQ9Y4W2 734 aaKnown RBP7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 ITGA6P23229 1130 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 TDRD7Q8NHU6 1098 aaKnown RBP7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 CD209Q9NNX6 404 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 MROH5Q6ZUA9 1318 aa7.95□□□□□ -1.14
SMARCAD1-203ENST00000394961 RIMBP2O15034 1052 aa7.94□□□□□ -1.14
SMARCAD1-203ENST00000394961 NF2P35240 595 aa7.94□□□□□ -1.14
SMARCAD1-203ENST00000394961 ARMC9Q7Z3E5 817 aa7.94□□□□□ -1.14
SMARCAD1-203ENST00000394961 ZNF157P51786 506 aaPredicted RBP7.94□□□□□ -1.14
SMARCAD1-203ENST00000394961 ZNF804AQ7Z570 1209 aa7.94□□□□□ -1.14
SMARCAD1-203ENST00000394961 CHRNDQ07001 517 aa7.94□□□□□ -1.14
SMARCAD1-203ENST00000394961 G2E3Q7L622 706 aa7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 TRMT2AQ8IZ69 625 aaKnown RBP7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 SLC4A2P04920 1241 aa7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 CNGB1Q14028 1251 aaPredicted RBP7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 NEUROD2Q15784 382 aa7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 SPRYD7Q5W111 196 aa7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 OGFOD1Q8N543 542 aa7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 FBXO46Q6PJ61 603 aaPredicted RBP7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 VGLL2Q8N8G2 317 aa7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 SALL1Q9NSC2 1324 aa7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 DDX60LQ5H9U9 1706 aaKnown RBP7.93□□□□□ -1.14
SMARCAD1-203ENST00000394961 SPDYE2BA6NHP3 402 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms