RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
RFFL-202ENST00000394597 PAG1Q9NWQ8 432 aa6.61□□□□□ -1.35
RFFL-202ENST00000394597 SMTNL1A8MU46 457 aa6.61□□□□□ -1.35
RFFL-202ENST00000394597 TTC31Q49AM3 519 aaPredicted RBP6.61□□□□□ -1.35
RFFL-202ENST00000394597 GIGYF2Q6Y7W6 1299 aaKnown RBP6.61□□□□□ -1.35
RFFL-202ENST00000394597 GTF3C6Q969F1 213 aa6.61□□□□□ -1.35
RFFL-202ENST00000394597 ZNF594Q96JF6 807 aaPredicted RBP6.61□□□□□ -1.35
RFFL-202ENST00000394597 MYCBPQ99417 103 aaPredicted RBP6.61□□□□□ -1.35
RFFL-202ENST00000394597 USP26Q9BXU7 913 aa6.61□□□□□ -1.35
RFFL-202ENST00000394597 IBTKQ9P2D0 1353 aaPredicted RBP6.6□□□□□ -1.35
RFFL-202ENST00000394597 ZNF213O14771 459 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 SAFBQ15424 915 aaKnown RBP eCLIP6.6□□□□□ -1.35
RFFL-202ENST00000394597 DRC1Q96MC2 740 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 TRMT1Q9NXH9 659 aaKnown RBP6.6□□□□□ -1.35
RFFL-202ENST00000394597 HMG20BQ9P0W2 317 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 LIMCH1Q9UPQ0 1083 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 CEMIPQ8WUJ3 1361 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 A0A1B0GUL7 405 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 NMIQ13287 307 aaPredicted RBP6.6□□□□□ -1.35
RFFL-202ENST00000394597 KRBA2Q6ZNG9 492 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
RFFL-202ENST00000394597 SH2B1Q9NRF2 756 aaPredicted RBP6.6□□□□□ -1.35
RFFL-202ENST00000394597 TFCP2L1Q9NZI6 479 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 ZBTB1Q9Y2K1 713 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 CRKLP46109 303 aaKnown RBP6.6□□□□□ -1.35
RFFL-202ENST00000394597 FOSBP53539 338 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 LARP1BQ659C4 914 aaKnown RBP6.6□□□□□ -1.35
RFFL-202ENST00000394597 TEX2Q8IWB9 1127 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 DBNDD2Q9BQY9 259 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 NAPBQ9H115 298 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 COPRSQ9NQ92 184 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 NRXN3Q9Y4C0 1643 aa6.6□□□□□ -1.35
RFFL-202ENST00000394597 KIF2AO00139 706 aaPredicted RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 CCDC69A6NI79 296 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 C6orf229H3BNL8 230 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 RNF113AO15541 343 aaKnown RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 EIF3JO75822 258 aaKnown RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 CT47A1Q5JQC4 288 aaPredicted RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 CCDC186Q7Z3E2 898 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 CCDC91Q7Z6B0 441 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 STK11IPQ8N1F8 1099 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 CERKQ8TCT0 537 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 ZNF526Q8TF50 670 aaPredicted RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 SECISBP2LQ93073 1101 aaKnown RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 TNMDQ9H2S6 317 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 RBM8AQ9Y5S9 174 aaKnown RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 JCADQ9P266 1359 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 ERVV-1B6SEH8 477 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 XBP1P17861 261 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 CREBRFQ8IUR6 639 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
RFFL-202ENST00000394597 NEK1Q96PY6 1258 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 OSBPL3Q9H4L5 887 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 STAP2Q9UGK3 403 aa6.59□□□□□ -1.35
RFFL-202ENST00000394597 GSPT1P15170 499 aaKnown RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 POLA2Q14181 598 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 SPTY2D1Q68D10 685 aaPredicted RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 DZIP1Q86YF9 867 aaKnown RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 EAF2Q96CJ1 260 aaPredicted RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 XAGE2Q96GT9 111 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 ANKRD2Q9GZV1 360 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 FBXO3Q9UK99 471 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 RAD50Q92878 1312 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 ATP5JP18859 108 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 IBSPP21815 317 aaPredicted RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 CTSWP56202 376 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 SLC9C2Q5TAH2 1124 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 CCDC83Q8IWF9 413 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 PPP1R1BQ9UD71 204 aaPredicted RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 CLIP2Q9UDT6 1046 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 MINDY4BA8MYZ0 360 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 RAD21O60216 631 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 IGKV5-2P06315 115 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 LDHCP07864 332 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 NKX1-1Q15270 411 aaPredicted RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 CCDC102AQ96A19 550 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 UBAC1Q9BSL1 405 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 NUP62CLQ9H1M0 184 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 H7C1W4 665 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 SLU7O95391 586 aaKnown RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 PUM3Q15397 648 aaKnown RBP6.58□□□□□ -1.36
RFFL-202ENST00000394597 MAP3K11Q16584 847 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 FAM196AQ6ZSG2 479 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 EFCC1Q9HA90 598 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 LMBRD1Q9NUN5 540 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 TMEM63CQ9P1W3 806 aa6.58□□□□□ -1.36
RFFL-202ENST00000394597 CDKL5O76039 1030 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 URI1O94763 535 aaPredicted RBP6.57□□□□□ -1.36
RFFL-202ENST00000394597 PTGS1P23219 599 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 GIMAP6Q6P9H5 292 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 SLF2Q8IX21 1173 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 CNBD1Q8NA66 436 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 ZNF622Q969S3 477 aaKnown RBP eCLIP6.57□□□□□ -1.36
RFFL-202ENST00000394597 RNF41Q9H4P4 317 aaPredicted RBP6.57□□□□□ -1.36
RFFL-202ENST00000394597 HELLSQ9NRZ9 838 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 ADAMTSL3P82987 1691 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 MROH5Q6ZUA9 1318 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 SGSM2O43147 1006 aa6.57□□□□□ -1.36
RFFL-202ENST00000394597 CCP110O43303 1012 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms