RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 RPAP1Q9BWH6 1393 aaPredicted RBP21.49■■□□□ 1.03
CLDND1-204ENST00000394185 CASZ1Q86V15 1759 aa21.49■■□□□ 1.03
CLDND1-204ENST00000394185 RGL2O15211 777 aa21.49■■□□□ 1.03
CLDND1-204ENST00000394185 CUL4AQ13619 759 aa21.49■■□□□ 1.03
CLDND1-204ENST00000394185 SF3B3Q15393 1217 aaKnown RBP21.49■■□□□ 1.03
CLDND1-204ENST00000394185 MCM4P33991 863 aa21.48■■□□□ 1.03
CLDND1-204ENST00000394185 CELF1Q92879 486 aaKnown RBP21.48■■□□□ 1.03
CLDND1-204ENST00000394185 TCEANC2Q96MN5 208 aa21.48■■□□□ 1.03
CLDND1-204ENST00000394185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.48■■□□□ 1.03
CLDND1-204ENST00000394185 A0A0G2JLW4 131 aa21.48■■□□□ 1.03
CLDND1-204ENST00000394185 SLC10A5Q5PT55 438 aa21.48■■□□□ 1.03
CLDND1-204ENST00000394185 COL24A1Q17RW2 1714 aa21.48■■□□□ 1.03
CLDND1-204ENST00000394185 ARID4AP29374 1257 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-204ENST00000394185 ZNF512BQ96KM6 892 aaPredicted RBP21.47■■□□□ 1.03
CLDND1-204ENST00000394185 CDC5LQ99459 802 aaKnown RBP21.47■■□□□ 1.03
CLDND1-204ENST00000394185 TM6SF1Q9BZW5 370 aa21.47■■□□□ 1.03
CLDND1-204ENST00000394185 PIH1D3Q9NQM4 214 aaKnown RBP21.47■■□□□ 1.03
CLDND1-204ENST00000394185 PDRG1Q9NUG6 133 aa21.47■■□□□ 1.03
CLDND1-204ENST00000394185 LARGE1O95461 756 aa21.47■■□□□ 1.03
CLDND1-204ENST00000394185 CYP21A2P08686 494 aa21.47■■□□□ 1.03
CLDND1-204ENST00000394185 SLC5A1P13866 664 aa21.47■■□□□ 1.03
CLDND1-204ENST00000394185 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
CLDND1-204ENST00000394185 DTNBO60941 627 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 BCAMP50895 628 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 RNF20Q5VTR2 975 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 ANKRD18AQ8IVF6 992 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 NYXQ9GZU5 481 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 PUS7LQ9H0K6 701 aaKnown RBP21.46■■□□□ 1.03
CLDND1-204ENST00000394185 ARAP2Q8WZ64 1704 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 HSPD1P10809 573 aaKnown RBP21.46■■□□□ 1.03
CLDND1-204ENST00000394185 RASGRF1Q13972 1273 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 WASHC4Q2M389 1173 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 PROM2Q8N271 834 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 HMG20BQ9P0W2 317 aa21.46■■□□□ 1.03
CLDND1-204ENST00000394185 NFIXQ14938 502 aa21.45■■□□□ 1.02
CLDND1-204ENST00000394185 CWC22Q9HCG8 908 aaKnown RBP21.45■■□□□ 1.02
CLDND1-204ENST00000394185 FOXP2O15409 715 aa21.44■■□□□ 1.02
CLDND1-204ENST00000394185 TPTE2Q6XPS3 522 aa21.44■■□□□ 1.02
CLDND1-204ENST00000394185 ZDHHC9Q9Y397 364 aa21.44■■□□□ 1.02
CLDND1-204ENST00000394185 U3KPZ7 1027 aaPredicted RBP21.44■■□□□ 1.02
CLDND1-204ENST00000394185 MYO5AQ9Y4I1 1855 aaKnown RBP21.44■■□□□ 1.02
CLDND1-204ENST00000394185 SLC51AQ86UW1 340 aa21.44■■□□□ 1.02
CLDND1-204ENST00000394185 NLRP3Q96P20 1036 aa21.44■■□□□ 1.02
CLDND1-204ENST00000394185 LIMCH1Q9UPQ0 1083 aa21.44■■□□□ 1.02
CLDND1-204ENST00000394185 GOLGB1Q14789 3259 aaKnown RBP21.44■■□□□ 1.02
CLDND1-204ENST00000394185 TSGA10IPQ3SY00 556 aa21.43■■□□□ 1.02
CLDND1-204ENST00000394185 BSDC1Q9NW68 430 aaPredicted RBP21.43■■□□□ 1.02
CLDND1-204ENST00000394185 IDH1O75874 414 aaKnown RBP21.43■■□□□ 1.02
CLDND1-204ENST00000394185 RBM6P78332 1123 aaKnown RBP21.43■■□□□ 1.02
CLDND1-204ENST00000394185 STOX1Q6ZVD7 989 aa21.43■■□□□ 1.02
CLDND1-204ENST00000394185 TICAM2Q86XR7 235 aa21.43■■□□□ 1.02
CLDND1-204ENST00000394185 SPATA5Q8NB90 893 aa21.43■■□□□ 1.02
CLDND1-204ENST00000394185 MINPP1Q9UNW1 487 aa21.43■■□□□ 1.02
CLDND1-204ENST00000394185 UBR3Q6ZT12 1888 aa21.42■■□□□ 1.02
CLDND1-204ENST00000394185 UQCRFS1P1P0C7P4 283 aa21.42■■□□□ 1.02
CLDND1-204ENST00000394185 SLC9C2Q5TAH2 1124 aa21.42■■□□□ 1.02
CLDND1-204ENST00000394185 TTLL5Q6EMB2 1281 aa21.42■■□□□ 1.02
CLDND1-204ENST00000394185 DSCC1Q9BVC3 393 aa21.42■■□□□ 1.02
CLDND1-204ENST00000394185 WWC3Q9ULE0 1092 aa21.42■■□□□ 1.02
CLDND1-204ENST00000394185 TNRC6CQ9HCJ0 1690 aaKnown RBP21.42■■□□□ 1.02
CLDND1-204ENST00000394185 ZFYP08048 801 aaPredicted RBP21.41■■□□□ 1.02
CLDND1-204ENST00000394185 RPS6KB1P23443 525 aa21.41■■□□□ 1.02
CLDND1-204ENST00000394185 PSMA5P28066 241 aa21.41■■□□□ 1.02
CLDND1-204ENST00000394185 SLC27A3Q5K4L6 730 aa21.41■■□□□ 1.02
CLDND1-204ENST00000394185 BLOC1S2Q6QNY1 142 aa21.41■■□□□ 1.02
CLDND1-204ENST00000394185 APPBP2Q92624 585 aa21.41■■□□□ 1.02
CLDND1-204ENST00000394185 INTS4Q96HW7 963 aaKnown RBP21.41■■□□□ 1.02
CLDND1-204ENST00000394185 IQSEC3Q9UPP2 1182 aaPredicted RBP21.41■■□□□ 1.02
CLDND1-204ENST00000394185 NPHP1O15259 732 aa21.41■■□□□ 1.02
CLDND1-204ENST00000394185 ADD2P35612 726 aa21.41■■□□□ 1.02
CLDND1-204ENST00000394185 GYS1P13807 737 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 TM4SF1P30408 202 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 TXNRD1Q16881 649 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 FOXD4L5Q5VV16 416 aaPredicted RBP21.4■■□□□ 1.02
CLDND1-204ENST00000394185 ZNF772Q68DY9 489 aaPredicted RBP21.4■■□□□ 1.02
CLDND1-204ENST00000394185 FOXD4L4Q8WXT5 416 aaPredicted RBP21.4■■□□□ 1.02
CLDND1-204ENST00000394185 CHAMP1Q96JM3 812 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 TPCN1Q9ULQ1 816 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 CARMIL3Q8ND23 1372 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 GYG1P46976 350 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 NUCB2P80303 420 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 ST3GAL1Q11201 340 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 ME3Q16798 604 aa21.4■■□□□ 1.02
CLDND1-204ENST00000394185 GPAA1O43292 621 aa21.39■■□□□ 1.01
CLDND1-204ENST00000394185 ADRA2BP18089 450 aa21.39■■□□□ 1.01
CLDND1-204ENST00000394185 DEKP35659 375 aaKnown RBP21.39■■□□□ 1.01
CLDND1-204ENST00000394185 RPS8P62241 208 aaKnown RBP21.39■■□□□ 1.01
CLDND1-204ENST00000394185 TTF1Q15361 905 aaPredicted RBP21.39■■□□□ 1.01
CLDND1-204ENST00000394185 LRRFIP1Q32MZ4 808 aaKnown RBP21.39■■□□□ 1.01
CLDND1-204ENST00000394185 A0A1B0GUL6 1792 aa21.39■■□□□ 1.01
CLDND1-204ENST00000394185 MYH7P12883 1935 aa21.39■■□□□ 1.01
CLDND1-204ENST00000394185 KLRK1P26718 216 aa21.38■■□□□ 1.01
CLDND1-204ENST00000394185 TOB2Q14106 344 aaPredicted RBP21.38■■□□□ 1.01
CLDND1-204ENST00000394185 NEK1Q96PY6 1258 aa21.38■■□□□ 1.01
CLDND1-204ENST00000394185 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.38■■□□□ 1.01
CLDND1-204ENST00000394185 ZNF532Q9HCE3 1301 aa21.38■■□□□ 1.01
CLDND1-204ENST00000394185 PDE6AP16499 860 aa21.38■■□□□ 1.01
CLDND1-204ENST00000394185 CCDC83Q8IWF9 413 aa21.38■■□□□ 1.01
CLDND1-204ENST00000394185 NECAB1Q8N987 351 aa21.38■■□□□ 1.01
CLDND1-204ENST00000394185 TCRBV5S4A2TA0A5A2 114 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms