RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PTMSP20962 102 aa22.63■■□□□ 1.21
CCDC50-202ENST00000392456 PRIMPOLQ96LW4 560 aa22.63■■□□□ 1.21
CCDC50-202ENST00000392456 TIGD1Q96MW7 591 aa22.63■■□□□ 1.21
CCDC50-202ENST00000392456 CEP126Q9P2H0 1117 aa22.63■■□□□ 1.21
CCDC50-202ENST00000392456 A0A1B0GUL7 405 aa22.62■■□□□ 1.21
CCDC50-202ENST00000392456 CCDC66A2RUB6 948 aa22.62■■□□□ 1.21
CCDC50-202ENST00000392456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.62■■□□□ 1.21
CCDC50-202ENST00000392456 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
CCDC50-202ENST00000392456 RBM25P49756 843 aaKnown RBP22.62■■□□□ 1.21
CCDC50-202ENST00000392456 ABCC12Q96J65 1359 aa22.61■■□□□ 1.21
CCDC50-202ENST00000392456 GABPB1Q06547 395 aaPredicted RBP22.61■■□□□ 1.21
CCDC50-202ENST00000392456 CNTROBQ8N137 903 aa22.61■■□□□ 1.21
CCDC50-202ENST00000392456 ESYT1Q9BSJ8 1104 aa22.61■■□□□ 1.21
CCDC50-202ENST00000392456 USP26Q9BXU7 913 aa22.61■■□□□ 1.21
CCDC50-202ENST00000392456 TRIM34Q9BYJ4 488 aa22.61■■□□□ 1.21
CCDC50-202ENST00000392456 CNNM1Q9NRU3 951 aa22.61■■□□□ 1.21
CCDC50-202ENST00000392456 COL4A1P02462 1669 aa22.61■■□□□ 1.21
CCDC50-202ENST00000392456 ADORA1P30542 326 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 CASC1Q6TDU7 716 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 CHMP4CQ96CF2 233 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 C4AP0C0L4 1744 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 DDIT3P35638 169 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 HMGN5P82970 282 aaKnown RBP22.6■■□□□ 1.21
CCDC50-202ENST00000392456 AXDND1Q5T1B0 1012 aaPredicted RBP22.6■■□□□ 1.21
CCDC50-202ENST00000392456 HELBQ8NG08 1087 aaPredicted RBP22.6■■□□□ 1.21
CCDC50-202ENST00000392456 KIF2CQ99661 725 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 GPR108Q9NPR9 543 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 RIC1Q4ADV7 1423 aa22.6■■□□□ 1.21
CCDC50-202ENST00000392456 PLSCR1O15162 318 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 NFIXQ14938 502 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 NBPF5PQ86XG9 351 aaPredicted RBP22.59■■□□□ 1.21
CCDC50-202ENST00000392456 ZNF622Q969S3 477 aaKnown RBP eCLIP22.59■■□□□ 1.215e-7■■□□□ 12.1
CCDC50-202ENST00000392456 SNAP23O00161 211 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 ATP5JP18859 108 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 ZNF827Q17R98 1081 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 METTL24Q5JXM2 366 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 FBXO3Q9UK99 471 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 ZNF609O15014 1411 aa22.59■■□□□ 1.21
CCDC50-202ENST00000392456 RGL2O15211 777 aa22.58■■□□□ 1.21
CCDC50-202ENST00000392456 UBR3Q6ZT12 1888 aa22.58■■□□□ 1.21
CCDC50-202ENST00000392456 APPP05067 770 aa22.58■■□□□ 1.21
CCDC50-202ENST00000392456 CCDC152Q4G0S7 254 aa22.58■■□□□ 1.21
CCDC50-202ENST00000392456 PDCL2Q8N4E4 241 aa22.58■■□□□ 1.21
CCDC50-202ENST00000392456 VGLL2Q8N8G2 317 aa22.58■■□□□ 1.21
CCDC50-202ENST00000392456 ZBTB9Q96C00 473 aa22.58■■□□□ 1.21
CCDC50-202ENST00000392456 GYS1P13807 737 aa22.57■■□□□ 1.2
CCDC50-202ENST00000392456 TNPO1Q92973 898 aaKnown RBP22.57■■□□□ 1.2
CCDC50-202ENST00000392456 KIF3AQ9Y496 699 aa22.57■■□□□ 1.2
CCDC50-202ENST00000392456 CHGBP05060 677 aa22.57■■□□□ 1.2
CCDC50-202ENST00000392456 GBP4Q96PP9 640 aa22.57■■□□□ 1.2
CCDC50-202ENST00000392456 CWC27Q6UX04 472 aaKnown RBP22.56■■□□□ 1.2
CCDC50-202ENST00000392456 ADRA2BP18089 450 aa22.56■■□□□ 1.2
CCDC50-202ENST00000392456 EVI5LQ96CN4 794 aa22.56■■□□□ 1.2
CCDC50-202ENST00000392456 XAGE2Q96GT9 111 aa22.56■■□□□ 1.2
CCDC50-202ENST00000392456 TSPYL1Q9H0U9 437 aa22.56■■□□□ 1.2
CCDC50-202ENST00000392456 HSP90B1P14625 803 aaKnown RBP22.55■■□□□ 1.2
CCDC50-202ENST00000392456 SLC10A5Q5PT55 438 aa22.55■■□□□ 1.2
CCDC50-202ENST00000392456 TAF5LO75529 589 aa22.55■■□□□ 1.2
CCDC50-202ENST00000392456 SLFN14P0C7P3 912 aa22.55■■□□□ 1.2
CCDC50-202ENST00000392456 SSFA2P28290 1259 aa22.55■■□□□ 1.2
CCDC50-202ENST00000392456 AK9Q5TCS8 1911 aa22.55■■□□□ 1.2
CCDC50-202ENST00000392456 TAF1P21675 1872 aa22.55■■□□□ 1.2
CCDC50-202ENST00000392456 U2AF2P26368 475 aaKnown RBP eCLIP22.54■■□□□ 1.21e-5■□□□□ 9.3
CCDC50-202ENST00000392456 TPTE2Q6XPS3 522 aa22.54■■□□□ 1.2
CCDC50-202ENST00000392456 FEZ1Q99689 392 aa22.54■■□□□ 1.2
CCDC50-202ENST00000392456 GOLGB1Q14789 3259 aaKnown RBP22.54■■□□□ 1.2
CCDC50-202ENST00000392456 FAM193AP78312 1265 aa22.54■■□□□ 1.2
CCDC50-202ENST00000392456 SF3B3Q15393 1217 aaKnown RBP22.54■■□□□ 1.2
CCDC50-202ENST00000392456 MPHOSPH8Q99549 860 aa22.54■■□□□ 1.2
CCDC50-202ENST00000392456 TFCP2L1Q9NZI6 479 aa22.54■■□□□ 1.2
CCDC50-202ENST00000392456 PDE8BO95263 885 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 NYXQ9GZU5 481 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 ANO2Q9NQ90 1003 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 CCDC39Q9UFE4 941 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 WTIPA6NIX2 430 aaPredicted RBP22.53■■□□□ 1.2
CCDC50-202ENST00000392456 REC8O95072 547 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 DDX46Q7L014 1031 aaKnown RBP22.53■■□□□ 1.2
CCDC50-202ENST00000392456 AKT1S1Q96B36 256 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 FAM227BQ96M60 508 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 HAUS7Q99871 368 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 AKAP2Q9Y2D5 859 aa22.53■■□□□ 1.2
CCDC50-202ENST00000392456 SGSM2O43147 1006 aa22.52■■□□□ 1.2
CCDC50-202ENST00000392456 SCARF1Q14162 830 aa22.52■■□□□ 1.2
CCDC50-202ENST00000392456 ZNF445P59923 1031 aa22.52■■□□□ 1.2
CCDC50-202ENST00000392456 CELF1Q92879 486 aaKnown RBP22.52■■□□□ 1.2
CCDC50-202ENST00000392456 OGFRQ9NZT2 677 aa22.52■■□□□ 1.2
CCDC50-202ENST00000392456 RTL9Q8NET4 1388 aa22.51■■□□□ 1.19
CCDC50-202ENST00000392456 FSD1Q9BTV5 496 aa22.51■■□□□ 1.19
CCDC50-202ENST00000392456 COL24A1Q17RW2 1714 aa22.51■■□□□ 1.19
CCDC50-202ENST00000392456 SNRKQ9NRH2 765 aa22.51■■□□□ 1.19
CCDC50-202ENST00000392456 LAMB2P55268 1798 aa22.5■■□□□ 1.19
CCDC50-202ENST00000392456 SLFNL1Q499Z3 407 aa22.5■■□□□ 1.19
CCDC50-202ENST00000392456 PI16Q6UXB8 463 aa22.5■■□□□ 1.19
CCDC50-202ENST00000392456 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
CCDC50-202ENST00000392456 NLRP3Q96P20 1036 aa22.5■■□□□ 1.19
CCDC50-202ENST00000392456 EFCC1Q9HA90 598 aa22.5■■□□□ 1.19
CCDC50-202ENST00000392456 DIAPH3Q9NSV4 1193 aa22.5■■□□□ 1.19
CCDC50-202ENST00000392456 LRP5O75197 1615 aa22.5■■□□□ 1.19
CCDC50-202ENST00000392456 IGHMBP2P38935 993 aaKnown RBP22.5■■□□□ 1.19
CCDC50-202ENST00000392456 SLC51AQ86UW1 340 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms