RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ZNF445P59923 1031 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 RPAINQ86UA6 219 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 VAT1LQ9HCJ6 419 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 SEPT14Q6ZU15 432 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 CTNND2Q9UQB3 1225 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 SPAG1Q07617 926 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 ARHGAP25P42331 645 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
SHANK1-204ENST00000391814 LMBR1Q8WVP7 490 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 SPAG5Q96R06 1193 aa18.28■□□□□ 0.52
SHANK1-204ENST00000391814 ZC3H6P61129 1189 aaKnown RBP18.27■□□□□ 0.52
SHANK1-204ENST00000391814 TNNC1P63316 161 aa18.27■□□□□ 0.52
SHANK1-204ENST00000391814 CAPN7Q9Y6W3 813 aa18.27■□□□□ 0.52
SHANK1-204ENST00000391814 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.52
SHANK1-204ENST00000391814 CCT6AP40227 531 aaKnown RBP18.27■□□□□ 0.52
SHANK1-204ENST00000391814 TPD52P55327 224 aaPredicted RBP18.27■□□□□ 0.52
SHANK1-204ENST00000391814 LUC7L2Q9Y383 392 aaKnown RBP18.27■□□□□ 0.52
SHANK1-204ENST00000391814 E7EVH7 732 aa18.27■□□□□ 0.51
SHANK1-204ENST00000391814 GADD45BO75293 160 aaPredicted RBP18.27■□□□□ 0.51
SHANK1-204ENST00000391814 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.51
SHANK1-204ENST00000391814 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.51
SHANK1-204ENST00000391814 USP26Q9BXU7 913 aa18.27■□□□□ 0.51
SHANK1-204ENST00000391814 MKRN1Q9UHC7 482 aaKnown RBP18.27■□□□□ 0.51
SHANK1-204ENST00000391814 TUBBP07437 444 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 CCDC172P0C7W6 258 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 PPP1R7Q15435 360 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 ZNF287Q9HBT7 754 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 SNRKQ9NRH2 765 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 KIF3CO14782 793 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 GOLGA6BA6NDN3 693 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 MAP3K9P80192 1104 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
SHANK1-204ENST00000391814 LONRF3Q496Y0 759 aa18.26■□□□□ 0.51
SHANK1-204ENST00000391814 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 PDE1CQ14123 709 aaPredicted RBP18.25■□□□□ 0.51
SHANK1-204ENST00000391814 A0A1B0GVL5 298 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 FMNL3Q8IVF7 1028 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 SETSIPP0DME0 302 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 RNASE9P60153 205 aaKnown RBP18.25■□□□□ 0.51
SHANK1-204ENST00000391814 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 CUL5Q93034 780 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 MEIS3Q99687 375 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 PRPHP41219 470 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 PNMA8AQ86V59 439 aaPredicted RBP18.25■□□□□ 0.51
SHANK1-204ENST00000391814 PLVAPQ9BX97 442 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 PSMA7O14818 248 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 TTF1Q15361 905 aaPredicted RBP18.25■□□□□ 0.51
SHANK1-204ENST00000391814 TMCO4Q5TGY1 634 aa18.25■□□□□ 0.51
SHANK1-204ENST00000391814 PPP4R3AQ6IN85 833 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 RPUSD2Q8IZ73 545 aaKnown RBP18.24■□□□□ 0.51
SHANK1-204ENST00000391814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.24■□□□□ 0.51
SHANK1-204ENST00000391814 ACTN2P35609 894 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 APOBRQ0VD83 1088 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 TSNAXIP1Q2TAA8 658 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 LRRC27Q9C0I9 530 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 MRVI1Q9Y6F6 885 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 PCF11O94913 1555 aaKnown RBP18.24■□□□□ 0.51
SHANK1-204ENST00000391814 SLC5A1P13866 664 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 AFAP1Q8N556 730 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 MTRF1LQ9UGC7 380 aaKnown RBP18.24■□□□□ 0.51
SHANK1-204ENST00000391814 NEDD9Q14511 834 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 CHST3Q7LGC8 479 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 ASIC1P78348 528 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 CAVIN4Q5BKX8 364 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 CNGA4Q8IV77 575 aa18.24■□□□□ 0.51
SHANK1-204ENST00000391814 C8orf74Q6P047 294 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 KAT14Q9H8E8 782 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 MAP7D1Q3KQU3 841 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 UTP14CQ5TAP6 766 aaKnown RBP18.23■□□□□ 0.51
SHANK1-204ENST00000391814 ARHGEF2Q92974 986 aaKnown RBP18.23■□□□□ 0.51
SHANK1-204ENST00000391814 TACO1Q9BSH4 297 aaKnown RBP18.23■□□□□ 0.51
SHANK1-204ENST00000391814 ZBTB43O43298 467 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 ZNF131P52739 623 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 STK38LQ9Y2H1 464 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 GKAP1Q5VSY0 366 aaPredicted RBP18.23■□□□□ 0.51
SHANK1-204ENST00000391814 TRIM68Q6AZZ1 485 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 INTS4Q96HW7 963 aaKnown RBP18.23■□□□□ 0.51
SHANK1-204ENST00000391814 EMILIN1Q9Y6C2 1016 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 BAIAP2L1Q9UHR4 511 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 MYL5Q02045 173 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 VCXQ9H320 206 aa18.23■□□□□ 0.51
SHANK1-204ENST00000391814 DZIP1Q86YF9 867 aaKnown RBP18.22■□□□□ 0.51
SHANK1-204ENST00000391814 IGSF22Q8N9C0 903 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 IFIT5Q13325 482 aaKnown RBP18.22■□□□□ 0.51
SHANK1-204ENST00000391814 RAB3IL1Q8TBN0 382 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 JARID2Q92833 1246 aaPredicted RBP18.22■□□□□ 0.51
SHANK1-204ENST00000391814 CLSTN2Q9H4D0 955 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 WTAPQ15007 396 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 CYP26C1Q6V0L0 522 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 TOM1L2Q6ZVM7 507 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 MRPL50Q8N5N7 158 aaKnown RBP18.22■□□□□ 0.51
SHANK1-204ENST00000391814 JAKMIP2Q96AA8 810 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 NKIRAS1Q9NYS0 192 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 ATP6V1AP38606 617 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 LMBRD1Q9NUN5 540 aa18.22■□□□□ 0.51
SHANK1-204ENST00000391814 CAMSAP2Q08AD1 1489 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 ZNF500O60304 480 aaPredicted RBP18.21■□□□□ 0.51
SHANK1-204ENST00000391814 RIPOR2Q9Y4F9 1068 aa18.21■□□□□ 0.51
SHANK1-204ENST00000391814 EEF2P13639 858 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms