RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ESR2Q92731 530 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 DHX58Q96C10 678 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 UBE2HP62256 183 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 GPIHBP1Q8IV16 184 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 ZSWIM4Q9H7M6 989 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 SLC27A2O14975 620 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 TEX35Q5T0J7 233 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 ZNF804AQ7Z570 1209 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 PUS7Q96PZ0 661 aaKnown RBP16.8■□□□□ 0.28
PSME4-201ENST00000389993 ZBTB21Q9ULJ3 1066 aa16.8■□□□□ 0.28
PSME4-201ENST00000389993 PREX2Q70Z35 1606 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 LDHCP07864 332 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 SP4Q02446 784 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 GJA3Q9Y6H8 435 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
PSME4-201ENST00000389993 PRKG1Q13976 671 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 SYKP43405 635 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 TCP10Q12799 353 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 GSPT1P15170 499 aaKnown RBP16.79■□□□□ 0.28
PSME4-201ENST00000389993 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
PSME4-201ENST00000389993 KIF5BP33176 963 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 STX17P56962 302 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 LRRC24Q50LG9 513 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
PSME4-201ENST00000389993 PHKG2P15735 406 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 PAF1Q8N7H5 531 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 CNBD1Q8NA66 436 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 KRT23Q9C075 422 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 EYA2O00167 538 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 LDHBP07195 334 aaKnown RBP16.78■□□□□ 0.28
PSME4-201ENST00000389993 NAPAP54920 295 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 TTC41PQ6P2S7 1318 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 USP8P40818 1118 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 CCDC178Q5BJE1 867 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 CACNA2D4Q7Z3S7 1137 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 CALM1P0DP23 149 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 CALM2P0DP24 149 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 CALM3P0DP25 149 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 GPCPD1Q9NPB8 672 aa16.78■□□□□ 0.28
PSME4-201ENST00000389993 RAB3GAP1Q15042 981 aa16.77■□□□□ 0.28
PSME4-201ENST00000389993 TMEM266Q2M3C6 531 aa16.77■□□□□ 0.28
PSME4-201ENST00000389993 URI1O94763 535 aaPredicted RBP16.77■□□□□ 0.28
PSME4-201ENST00000389993 UBA7P41226 1012 aa16.77■□□□□ 0.28
PSME4-201ENST00000389993 PRDM15P57071 1507 aaPredicted RBP16.77■□□□□ 0.28
PSME4-201ENST00000389993 GIGYF1O75420 1035 aaPredicted RBP16.77■□□□□ 0.28
PSME4-201ENST00000389993 MTIF2P46199 727 aaKnown RBP16.77■□□□□ 0.28
PSME4-201ENST00000389993 PHKBQ93100 1093 aa16.77■□□□□ 0.28
PSME4-201ENST00000389993 TMEM94Q12767 1356 aa16.77■□□□□ 0.28
PSME4-201ENST00000389993 AOPEPQ8N6M6 819 aa16.77■□□□□ 0.27
PSME4-201ENST00000389993 NYXQ9GZU5 481 aa16.77■□□□□ 0.27
PSME4-201ENST00000389993 KIAA0232Q92628 1395 aa16.77■□□□□ 0.27
PSME4-201ENST00000389993 USP44Q9H0E7 712 aa16.77■□□□□ 0.27
PSME4-201ENST00000389993 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
PSME4-201ENST00000389993 PLEKHG3A1L390 1219 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 TDRD12Q587J7 1177 aaKnown RBP16.76■□□□□ 0.27
PSME4-201ENST00000389993 ZSCAN30Q86W11 494 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 ERCC4Q92889 916 aaPredicted RBP16.76■□□□□ 0.27
PSME4-201ENST00000389993 ZFYP08048 801 aaPredicted RBP16.76■□□□□ 0.27
PSME4-201ENST00000389993 ERCC3P19447 782 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 CLEC11AQ9Y240 323 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 A0A1B0GVL5 298 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 STX1AQ16623 288 aa16.76■□□□□ 0.27
PSME4-201ENST00000389993 GSTO1P78417 241 aa16.75■□□□□ 0.27
PSME4-201ENST00000389993 PUS3Q9BZE2 481 aaKnown RBP16.75■□□□□ 0.27
PSME4-201ENST00000389993 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
PSME4-201ENST00000389993 GPAA1O43292 621 aa16.75■□□□□ 0.27
PSME4-201ENST00000389993 ZNF174Q15697 407 aa16.75■□□□□ 0.27
PSME4-201ENST00000389993 RRAGBQ5VZM2 374 aa16.75■□□□□ 0.27
PSME4-201ENST00000389993 CCDC87Q9NVE4 849 aa16.75■□□□□ 0.27
PSME4-201ENST00000389993 JAK2O60674 1132 aa16.75■□□□□ 0.27
PSME4-201ENST00000389993 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
PSME4-201ENST00000389993 EFCAB6Q5THR3 1501 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
PSME4-201ENST00000389993 PTH1RQ03431 593 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 PTPN14Q15678 1187 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 FAM47AQ5JRC9 791 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 CALML4Q96GE6 196 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 XRCC6P12956 609 aaKnown RBP eCLIP16.74■□□□□ 0.275e-8■□□□□ 9.8
PSME4-201ENST00000389993 TNNI2P48788 182 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 TNIP1Q15025 636 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 DDX19AQ9NUU7 478 aaKnown RBP16.74■□□□□ 0.27
PSME4-201ENST00000389993 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 PDE8AO60658 829 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 SYT1P21579 422 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 NEO1Q92859 1461 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 GYG1P46976 350 aa16.74■□□□□ 0.27
PSME4-201ENST00000389993 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 PTGS1P23219 599 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 STAT6P42226 847 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 CCDC102BQ68D86 513 aa16.73■□□□□ 0.27
PSME4-201ENST00000389993 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
PSME4-201ENST00000389993 DHX32Q7L7V1 743 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms