RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 KIAA1211Q6ZU35 1233 aa14.73□□□□□ -0.05
SPTBN1-203ENST00000389980 CD2BP2O95400 341 aaKnown RBP14.72□□□□□ -0.05
SPTBN1-203ENST00000389980 SF3B2Q13435 895 aaKnown RBP14.72□□□□□ -0.05
SPTBN1-203ENST00000389980 BECN1Q14457 450 aa14.72□□□□□ -0.05
SPTBN1-203ENST00000389980 RAD50Q92878 1312 aa14.72□□□□□ -0.05
SPTBN1-203ENST00000389980 MMP10P09238 476 aa14.71□□□□□ -0.05
SPTBN1-203ENST00000389980 CCDC129Q6ZRS4 1044 aa14.71□□□□□ -0.05
SPTBN1-203ENST00000389980 RPGRQ92834 1020 aaKnown RBP14.71□□□□□ -0.05
SPTBN1-203ENST00000389980 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.05
SPTBN1-203ENST00000389980 GRAPQ13588 217 aa14.71□□□□□ -0.05
SPTBN1-203ENST00000389980 GRAPLQ8TC17 118 aaPredicted RBP14.71□□□□□ -0.05
SPTBN1-203ENST00000389980 IQSEC3Q9UPP2 1182 aaPredicted RBP14.71□□□□□ -0.05
SPTBN1-203ENST00000389980 ANKRD31Q8N7Z5 1873 aa14.71□□□□□ -0.06
SPTBN1-203ENST00000389980 CYP2E1P05181 493 aaPredicted RBP14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 KLRK1P26718 216 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 BAG6P46379 1132 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 GYG1P46976 350 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 CRY2Q49AN0 593 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 PDGFDQ9GZP0 370 aaPredicted RBP14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 STK32BQ9NY57 414 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 MED23Q9ULK4 1368 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 MCCP23508 829 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 HSPA4P34932 840 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 RASGRF1Q13972 1273 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 SPRYD3Q8NCJ5 442 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 ZNF512BQ96KM6 892 aaPredicted RBP14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 HMG20BQ9P0W2 317 aa14.7□□□□□ -0.06
SPTBN1-203ENST00000389980 CCDC171Q6TFL3 1326 aa14.69□□□□□ -0.06
SPTBN1-203ENST00000389980 MYH7P12883 1935 aa14.69□□□□□ -0.06
SPTBN1-203ENST00000389980 UQCRFS1P1P0C7P4 283 aa14.69□□□□□ -0.06
SPTBN1-203ENST00000389980 UBE4AQ14139 1066 aa14.69□□□□□ -0.06
SPTBN1-203ENST00000389980 PIH1D3Q9NQM4 214 aaKnown RBP14.69□□□□□ -0.06
SPTBN1-203ENST00000389980 RFX7Q2KHR2 1363 aa14.69□□□□□ -0.06
SPTBN1-203ENST00000389980 KCNJ4P48050 445 aa14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 RABEP1Q15276 862 aa14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 RNF113AO15541 343 aaKnown RBP14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 MCMDC2Q4G0Z9 681 aa14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 RASEFQ8IZ41 740 aa14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 SPATA5Q8NB90 893 aa14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 PARP3Q9Y6F1 533 aa14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 NRXN2Q9P2S2 1712 aa14.68□□□□□ -0.06
SPTBN1-203ENST00000389980 ZMYM1Q5SVZ6 1142 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 PRPF40BQ6NWY9 871 aaKnown RBP14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 HSCBQ8IWL3 235 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 IDH1O75874 414 aaKnown RBP14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 ILDR1Q86SU0 546 aaPredicted RBP14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 MAP4K1Q92918 833 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 OSBP2Q969R2 916 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 SNX21Q969T3 373 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 RBM17Q96I25 401 aaKnown RBP14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 ANKRD2Q9GZV1 360 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 ANKIB1Q9P2G1 1089 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 RBM8AQ9Y5S9 174 aaKnown RBP14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 SNX14Q9Y5W7 946 aa14.67□□□□□ -0.06
SPTBN1-203ENST00000389980 M0R2C6 588 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 EPB41L2O43491 1005 aaKnown RBP14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 WASHC4Q2M389 1173 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 TXNRD3Q86VQ6 643 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 FAM84BQ96KN1 310 aaPredicted RBP14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 KLRG2A4D1S0 409 aaPredicted RBP14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 VPS53Q5VIR6 699 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 GPR101Q96P66 508 aaPredicted RBP14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 BRIP1Q9BX63 1249 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 HELLSQ9NRZ9 838 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 ZNF804BA4D1E1 1349 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 MAST3O60307 1309 aa14.66□□□□□ -0.06
SPTBN1-203ENST00000389980 NEK4P51957 841 aa14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 ANAPC15P60006 121 aa14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 NECTIN1Q15223 517 aa14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 CAVIN4Q5BKX8 364 aa14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 UPF3BQ9BZI7 483 aaKnown RBP14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 WWC3Q9ULE0 1092 aa14.65□□□□□ -0.06
SPTBN1-203ENST00000389980 HOXA10P31260 410 aaPredicted RBP14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 TTF1Q15361 905 aaPredicted RBP14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 SLC9C2Q5TAH2 1124 aa14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 PUS7LQ9H0K6 701 aaKnown RBP14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 TAF6LQ9Y6J9 622 aa14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 COL1A1P02452 1464 aaPredicted RBP14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 GPSM2P81274 684 aa14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 CREB3L3Q68CJ9 461 aa14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 NSFL1CQ9UNZ2 370 aaKnown RBP14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 QSER1Q2KHR3 1735 aa14.64□□□□□ -0.07
SPTBN1-203ENST00000389980 COL11A2P13942 1736 aaPredicted RBP14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 SRGNP10124 158 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 ADCK5Q3MIX3 580 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 FBXO33Q7Z6M2 555 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 MYH13Q9UKX3 1938 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 SLC27A2O14975 620 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 ZFYP08048 801 aaPredicted RBP14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 CPA1P15085 419 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 ADD2P35612 726 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 OLFM4Q6UX06 510 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 CRAMP1Q96RY5 1269 aa14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 GNL3LQ9NVN8 582 aaKnown RBP14.63□□□□□ -0.07
SPTBN1-203ENST00000389980 DOCK2Q92608 1830 aa14.62□□□□□ -0.07
SPTBN1-203ENST00000389980 CACNA1SQ13698 1873 aa14.62□□□□□ -0.07
SPTBN1-203ENST00000389980 XDHP47989 1333 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms